RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 MOXD2PA6NHM9 499 aa9.81□□□□□ -0.84
SF3B3-214ENST00000572365 KDM4AO75164 1064 aa9.81□□□□□ -0.84
SF3B3-214ENST00000572365 SLC10A3P09131 477 aa9.81□□□□□ -0.84
SF3B3-214ENST00000572365 USP46P62068 366 aa9.81□□□□□ -0.84
SF3B3-214ENST00000572365 NBPF3Q9H094 633 aa9.81□□□□□ -0.84
SF3B3-214ENST00000572365 KIF13AQ9H1H9 1805 aa9.8□□□□□ -0.84
SF3B3-214ENST00000572365 SUPT5HO00267 1087 aaKnown RBP9.8□□□□□ -0.84
SF3B3-214ENST00000572365 RFC5P40937 340 aa9.8□□□□□ -0.84
SF3B3-214ENST00000572365 HDGFP51858 240 aaKnown RBP9.8□□□□□ -0.84
SF3B3-214ENST00000572365 FBXO31Q5XUX0 539 aaPredicted RBP9.8□□□□□ -0.84
SF3B3-214ENST00000572365 NDUFV2P19404 249 aa9.78□□□□□ -0.84
SF3B3-214ENST00000572365 SLC4A3P48751 1232 aa9.78□□□□□ -0.84
SF3B3-214ENST00000572365 SLF2Q8IX21 1173 aa9.78□□□□□ -0.84
SF3B3-214ENST00000572365 BANK1Q8NDB2 785 aa9.78□□□□□ -0.84
SF3B3-214ENST00000572365 CCDC88BA6NC98 1476 aa9.78□□□□□ -0.84
SF3B3-214ENST00000572365 SYNJ1O43426 1573 aa9.77□□□□□ -0.85
SF3B3-214ENST00000572365 DNMBPQ6XZF7 1577 aa9.77□□□□□ -0.85
SF3B3-214ENST00000572365 SOGA1O94964 1423 aa9.77□□□□□ -0.85
SF3B3-214ENST00000572365 HOXA2O43364 376 aa9.77□□□□□ -0.85
SF3B3-214ENST00000572365 FAM69CQ0P6D2 419 aa9.77□□□□□ -0.85
SF3B3-214ENST00000572365 TMEM259Q4ZIN3 620 aa9.77□□□□□ -0.85
SF3B3-214ENST00000572365 SAMD7Q7Z3H4 446 aa9.77□□□□□ -0.85
SF3B3-214ENST00000572365 POLA1P09884 1462 aaPredicted RBP9.77□□□□□ -0.85
SF3B3-214ENST00000572365 TOP2AP11388 1531 aaKnown RBP9.77□□□□□ -0.85
SF3B3-214ENST00000572365 TSPOAP1O95153 1857 aa9.76□□□□□ -0.85
SF3B3-214ENST00000572365 A6NJR5 290 aa9.76□□□□□ -0.85
SF3B3-214ENST00000572365 LILRB3O75022 631 aa9.76□□□□□ -0.85
SF3B3-214ENST00000572365 LSM11P83369 360 aaKnown RBP eCLIP9.76□□□□□ -0.85
SF3B3-214ENST00000572365 PCDHB15Q9Y5E8 787 aa9.76□□□□□ -0.85
SF3B3-214ENST00000572365 SPDYE5A6NIY4 337 aa9.75□□□□□ -0.85
SF3B3-214ENST00000572365 QPCTQ16769 361 aa9.75□□□□□ -0.85
SF3B3-214ENST00000572365 PRPF38BQ5VTL8 546 aaKnown RBP9.75□□□□□ -0.85
SF3B3-214ENST00000572365 ADGRD1Q6QNK2 874 aa9.75□□□□□ -0.85
SF3B3-214ENST00000572365 ZFRQ96KR1 1074 aaKnown RBP9.75□□□□□ -0.85
SF3B3-214ENST00000572365 UBTFP17480 764 aaKnown RBP9.74□□□□□ -0.85
SF3B3-214ENST00000572365 HRO43593 1189 aa9.73□□□□□ -0.85
SF3B3-214ENST00000572365 MMRN1Q13201 1228 aa9.73□□□□□ -0.85
SF3B3-214ENST00000572365 CSPP1Q1MSJ5 1256 aa9.73□□□□□ -0.85
SF3B3-214ENST00000572365 MRPL50Q8N5N7 158 aaKnown RBP9.73□□□□□ -0.85
SF3B3-214ENST00000572365 ABCC8Q09428 1581 aa9.72□□□□□ -0.85
SF3B3-214ENST00000572365 FDX1P10109 184 aa9.72□□□□□ -0.85
SF3B3-214ENST00000572365 CLUAP1Q96AJ1 413 aa9.72□□□□□ -0.85
SF3B3-214ENST00000572365 CFHP08603 1231 aa9.71□□□□□ -0.86
SF3B3-214ENST00000572365 ARXQ96QS3 562 aa9.71□□□□□ -0.86
SF3B3-214ENST00000572365 ZBTB3Q9H5J0 574 aa9.71□□□□□ -0.86
SF3B3-214ENST00000572365 PCDHGC3Q9UN70 934 aa9.71□□□□□ -0.86
SF3B3-214ENST00000572365 SOCS7O14512 581 aa9.7□□□□□ -0.86
SF3B3-214ENST00000572365 HRCP23327 699 aa9.7□□□□□ -0.86
SF3B3-214ENST00000572365 FUT2Q10981 343 aa9.7□□□□□ -0.86
SF3B3-214ENST00000572365 RTL5Q5HYW3 569 aaPredicted RBP9.7□□□□□ -0.86
SF3B3-214ENST00000572365 SPNS2Q8IVW8 549 aa9.7□□□□□ -0.86
SF3B3-214ENST00000572365 CABLES1Q8TDN4 633 aa9.7□□□□□ -0.86
SF3B3-214ENST00000572365 SNRKQ9NRH2 765 aa9.7□□□□□ -0.86
SF3B3-214ENST00000572365 NUTM2BA6NNL0 878 aaPredicted RBP9.69□□□□□ -0.86
SF3B3-214ENST00000572365 NUTM2EB1AL46 878 aaPredicted RBP9.69□□□□□ -0.86
SF3B3-214ENST00000572365 GRIPAP1Q4V328 841 aa9.69□□□□□ -0.86
SF3B3-214ENST00000572365 NUTM2DQ5VT03 806 aaPredicted RBP9.69□□□□□ -0.86
SF3B3-214ENST00000572365 NUTM2AQ8IVF1 878 aaPredicted RBP9.69□□□□□ -0.86
SF3B3-214ENST00000572365 NECTIN2Q92692 538 aa9.69□□□□□ -0.86
SF3B3-214ENST00000572365 HLA-CQ95604 372 aa9.69□□□□□ -0.86
SF3B3-214ENST00000572365 LRCH3Q96II8 777 aa9.69□□□□□ -0.86
SF3B3-214ENST00000572365 GUCA2AQ02747 115 aa9.68□□□□□ -0.86
SF3B3-214ENST00000572365 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.68□□□□□ -0.86
SF3B3-214ENST00000572365 SYNJ2O15056 1496 aa9.67□□□□□ -0.86
SF3B3-214ENST00000572365 TRAK2O60296 914 aa9.67□□□□□ -0.86
SF3B3-214ENST00000572365 RNF40O75150 1001 aa9.67□□□□□ -0.86
SF3B3-214ENST00000572365 ATP6V1AP38606 617 aa9.67□□□□□ -0.86
SF3B3-214ENST00000572365 MTMR14Q8NCE2 650 aa9.67□□□□□ -0.86
SF3B3-214ENST00000572365 FGD5Q6ZNL6 1462 aa9.66□□□□□ -0.86
SF3B3-214ENST00000572365 RAD21O60216 631 aa9.66□□□□□ -0.86
SF3B3-214ENST00000572365 AP1G2O75843 785 aa9.66□□□□□ -0.86
SF3B3-214ENST00000572365 MTMR2Q13614 643 aa9.66□□□□□ -0.86
SF3B3-214ENST00000572365 KMT5BQ4FZB7 885 aa9.66□□□□□ -0.86
SF3B3-214ENST00000572365 POM121Q96HA1 1249 aa9.66□□□□□ -0.86
SF3B3-214ENST00000572365 COG6Q9Y2V7 657 aa9.66□□□□□ -0.86
SF3B3-214ENST00000572365 GRIN2BQ13224 1484 aa9.66□□□□□ -0.86
SF3B3-214ENST00000572365 MAGI1Q96QZ7 1491 aaPredicted RBP9.66□□□□□ -0.86
SF3B3-214ENST00000572365 PROSER2Q86WR7 435 aaPredicted RBP9.65□□□□□ -0.86
SF3B3-214ENST00000572365 FNBP4Q8N3X1 1017 aaPredicted RBP9.65□□□□□ -0.86
SF3B3-214ENST00000572365 C1orf115Q9H7X2 142 aa9.65□□□□□ -0.86
SF3B3-214ENST00000572365 PBRM1Q86U86 1689 aa9.64□□□□□ -0.87
SF3B3-214ENST00000572365 ACTN4O43707 911 aaKnown RBP9.64□□□□□ -0.87
SF3B3-214ENST00000572365 ANKRD13DQ6ZTN6 518 aa9.64□□□□□ -0.87
SF3B3-214ENST00000572365 ANKK1Q8NFD2 765 aa9.64□□□□□ -0.87
SF3B3-214ENST00000572365 KDM6BO15054 1643 aa9.64□□□□□ -0.87
SF3B3-214ENST00000572365 CEP170Q5SW79 1584 aa9.63□□□□□ -0.87
SF3B3-214ENST00000572365 HECW2Q9P2P5 1572 aa9.63□□□□□ -0.87
SF3B3-214ENST00000572365 TTBK1Q5TCY1 1321 aaPredicted RBP9.63□□□□□ -0.87
SF3B3-214ENST00000572365 SOWAHBA6NEL2 793 aa9.63□□□□□ -0.87
SF3B3-214ENST00000572365 USP17L8P0C7I0 530 aa9.63□□□□□ -0.87
SF3B3-214ENST00000572365 PRR14Q9BWN1 585 aa9.63□□□□□ -0.87
SF3B3-214ENST00000572365 APBB1O00213 710 aa9.62□□□□□ -0.87
SF3B3-214ENST00000572365 MORN1Q5T089 497 aa9.62□□□□□ -0.87
SF3B3-214ENST00000572365 FBXO41Q8TF61 875 aa9.62□□□□□ -0.87
SF3B3-214ENST00000572365 STAC3Q96MF2 364 aa9.62□□□□□ -0.87
SF3B3-214ENST00000572365 GOLGA8CPA6NN73 597 aa9.61□□□□□ -0.87
SF3B3-214ENST00000572365 C6orf229H3BNL8 230 aa9.61□□□□□ -0.87
SF3B3-214ENST00000572365 ARID3CA6NKF2 412 aa9.6□□□□□ -0.87
SF3B3-214ENST00000572365 CFAP99D6REC4 459 aa9.6□□□□□ -0.87
SF3B3-214ENST00000572365 ADGRL1O94910 1474 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms