RNA–Protein interactions for RNA: ENST00000570688.1

ABR-208, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-208ENST00000570688 CDC42BPGQ6DT37 1551 aa16.01■□□□□ 0.15
ABR-208ENST00000570688 DCCP43146 1447 aa16.01■□□□□ 0.15
ABR-208ENST00000570688 ADGRB2O60241 1585 aa16■□□□□ 0.15
ABR-208ENST00000570688 FMN2Q9NZ56 1722 aa16■□□□□ 0.15
ABR-208ENST00000570688 TIMELESSQ9UNS1 1208 aa16■□□□□ 0.15
ABR-208ENST00000570688 USP32Q8NFA0 1604 aa16■□□□□ 0.15
ABR-208ENST00000570688 ROCK2O75116 1388 aaKnown RBP16■□□□□ 0.15
ABR-208ENST00000570688 RGPD8O14715 1765 aaPredicted RBP15.99■□□□□ 0.15
ABR-208ENST00000570688 ROBO1Q9Y6N7 1651 aa15.99■□□□□ 0.15
ABR-208ENST00000570688 QRICH2Q9H0J4 1663 aa15.98■□□□□ 0.15
ABR-208ENST00000570688 PIP4K2BP78356 416 aa15.97■□□□□ 0.15
ABR-208ENST00000570688 C14orf37Q86TY3 774 aa15.97■□□□□ 0.15
ABR-208ENST00000570688 HIRIP3Q9BW71 556 aaPredicted RBP15.97■□□□□ 0.15
ABR-208ENST00000570688 C1orf167Q5SNV9 1468 aa15.97■□□□□ 0.15
ABR-208ENST00000570688 MINK1Q8N4C8 1332 aaPredicted RBP15.96■□□□□ 0.15
ABR-208ENST00000570688 TOM1O60784 492 aa15.96■□□□□ 0.15
ABR-208ENST00000570688 SLAIN2Q9P270 581 aa15.96■□□□□ 0.15
ABR-208ENST00000570688 TULP4Q9NRJ4 1543 aa15.95■□□□□ 0.14
ABR-208ENST00000570688 PRR36Q9H6K5 1346 aa15.94■□□□□ 0.14
ABR-208ENST00000570688 NUTM2FA1L443 756 aa15.93■□□□□ 0.14
ABR-208ENST00000570688 BRINP3Q76B58 766 aa15.93■□□□□ 0.14
ABR-208ENST00000570688 CADPS2Q86UW7 1296 aa15.93■□□□□ 0.14
ABR-208ENST00000570688 ORAI2Q96SN7 254 aa15.93■□□□□ 0.14
ABR-208ENST00000570688 CARD11Q9BXL7 1154 aa15.93■□□□□ 0.14
ABR-208ENST00000570688 POGKQ9P215 609 aa15.93■□□□□ 0.14
ABR-208ENST00000570688 ATF3P18847 181 aa15.92■□□□□ 0.14
ABR-208ENST00000570688 CENPJQ9HC77 1338 aaPredicted RBP15.92■□□□□ 0.14
ABR-208ENST00000570688 DDX17Q92841 729 aaKnown RBP15.91■□□□□ 0.14
ABR-208ENST00000570688 NHSL1Q5SYE7 1610 aa15.9■□□□□ 0.14
ABR-208ENST00000570688 HSPA1LP34931 641 aa15.9■□□□□ 0.14
ABR-208ENST00000570688 TESK2Q96S53 571 aa15.9■□□□□ 0.14
ABR-208ENST00000570688 ATP7BP35670 1465 aa15.9■□□□□ 0.14
ABR-208ENST00000570688 WASLO00401 505 aaPredicted RBP15.89■□□□□ 0.13
ABR-208ENST00000570688 COL16A1Q07092 1604 aaPredicted RBP15.89■□□□□ 0.13
ABR-208ENST00000570688 SCAF1Q9H7N4 1312 aaKnown RBP15.89■□□□□ 0.13
ABR-208ENST00000570688 TOPAZ1Q8N9V7 1692 aa15.89■□□□□ 0.13
ABR-208ENST00000570688 AHDC1Q5TGY3 1603 aaPredicted RBP15.88■□□□□ 0.13
ABR-208ENST00000570688 USP47Q96K76 1375 aa15.87■□□□□ 0.13
ABR-208ENST00000570688 ST20-MTHFSA0A0A6YYL1 179 aa15.86■□□□□ 0.13
ABR-208ENST00000570688 CDK19Q9BWU1 502 aa15.86■□□□□ 0.13
ABR-208ENST00000570688 SBNO2Q9Y2G9 1366 aa15.86■□□□□ 0.13
ABR-208ENST00000570688 ANKARQ7Z5J8 1434 aa15.85■□□□□ 0.13
ABR-208ENST00000570688 PHLPP1O60346 1717 aa15.85■□□□□ 0.13
ABR-208ENST00000570688 CABP2Q9NPB3 220 aa15.83■□□□□ 0.12
ABR-208ENST00000570688 PXDNQ92626 1479 aa15.83■□□□□ 0.12
ABR-208ENST00000570688 ESCO1Q5FWF5 840 aa15.82■□□□□ 0.12
ABR-208ENST00000570688 NUDT16Q96DE0 195 aaKnown RBP15.82■□□□□ 0.12
ABR-208ENST00000570688 EIF3AQ14152 1382 aaKnown RBP15.82■□□□□ 0.12
ABR-208ENST00000570688 DISP3Q9P2K9 1392 aa15.82■□□□□ 0.12
ABR-208ENST00000570688 KIF1AQ12756 1690 aa15.81■□□□□ 0.12
ABR-208ENST00000570688 XPCQ01831 940 aaPredicted RBP15.8■□□□□ 0.12
ABR-208ENST00000570688 PMFBP1Q8TBY8 1022 aa15.8■□□□□ 0.12
ABR-208ENST00000570688 ITSN1Q15811 1721 aa15.8■□□□□ 0.12
ABR-208ENST00000570688 TRPM3Q9HCF6 1732 aaPredicted RBP15.8■□□□□ 0.12
ABR-208ENST00000570688 SOS2Q07890 1332 aaPredicted RBP15.79■□□□□ 0.12
ABR-208ENST00000570688 FOXO3O43524 673 aa15.79■□□□□ 0.12
ABR-208ENST00000570688 HSPA5P11021 654 aaKnown RBP15.79■□□□□ 0.12
ABR-208ENST00000570688 PHF8Q9UPP1 1060 aa15.79■□□□□ 0.12
ABR-208ENST00000570688 CD163L1Q9NR16 1453 aa15.77■□□□□ 0.11
ABR-208ENST00000570688 EVC2Q86UK5 1308 aa15.76■□□□□ 0.11
ABR-208ENST00000570688 C11orf95C9JLR9 678 aaPredicted RBP15.76■□□□□ 0.11
ABR-208ENST00000570688 PPIP5K1Q6PFW1 1433 aa15.76■□□□□ 0.11
ABR-208ENST00000570688 POLR3AO14802 1390 aaPredicted RBP15.75■□□□□ 0.11
ABR-208ENST00000570688 PLEKHG3A1L390 1219 aa15.75■□□□□ 0.11
ABR-208ENST00000570688 SRPK2P78362 688 aaKnown RBP15.75■□□□□ 0.11
ABR-208ENST00000570688 MYOM1P52179 1685 aa15.75■□□□□ 0.11
ABR-208ENST00000570688 SHPRHQ149N8 1683 aa15.74■□□□□ 0.11
ABR-208ENST00000570688 CCDC61Q9Y6R9 512 aa15.74■□□□□ 0.11
ABR-208ENST00000570688 AKAP12Q02952 1782 aa15.74■□□□□ 0.11
ABR-208ENST00000570688 PNPLA6Q8IY17 1366 aa15.74■□□□□ 0.11
ABR-208ENST00000570688 ALS2Q96Q42 1657 aa15.73■□□□□ 0.11
ABR-208ENST00000570688 ACEP12821 1306 aa15.73■□□□□ 0.11
ABR-208ENST00000570688 LRP6O75581 1613 aa15.73■□□□□ 0.11
ABR-208ENST00000570688 CABP1Q9NZU7 370 aa15.73■□□□□ 0.11
ABR-208ENST00000570688 NPHP3Q7Z494 1330 aa15.72■□□□□ 0.11
ABR-208ENST00000570688 KRT28Q7Z3Y7 464 aa15.72■□□□□ 0.11
ABR-208ENST00000570688 NRKQ7Z2Y5 1582 aa15.71■□□□□ 0.11
ABR-208ENST00000570688 CPSF1Q10570 1443 aaKnown RBP15.71■□□□□ 0.11
ABR-208ENST00000570688 SSH2Q76I76 1423 aa15.71■□□□□ 0.11
ABR-208ENST00000570688 EIF4G2P78344 907 aaKnown RBP eCLIP15.71■□□□□ 0.11
ABR-208ENST00000570688 COL22A1Q8NFW1 1626 aaPredicted RBP15.71■□□□□ 0.11
ABR-208ENST00000570688 CRYBG1Q9Y4K1 1723 aa15.71■□□□□ 0.1
ABR-208ENST00000570688 SLC12A5Q9H2X9 1139 aa15.7■□□□□ 0.1
ABR-208ENST00000570688 MON2Q7Z3U7 1717 aa15.7■□□□□ 0.1
ABR-208ENST00000570688 SPATA31A3Q5VYP0 1347 aa15.69■□□□□ 0.1
ABR-208ENST00000570688 MARF1Q9Y4F3 1742 aaKnown RBP15.69■□□□□ 0.1
ABR-208ENST00000570688 ATAD2Q6PL18 1390 aa15.69■□□□□ 0.1
ABR-208ENST00000570688 JCADQ9P266 1359 aa15.69■□□□□ 0.1
ABR-208ENST00000570688 ABCA3Q99758 1704 aa15.68■□□□□ 0.1
ABR-208ENST00000570688 SBNO1A3KN83 1393 aa15.68■□□□□ 0.1
ABR-208ENST00000570688 PUS7Q96PZ0 661 aaKnown RBP15.68■□□□□ 0.1
ABR-208ENST00000570688 USP6P35125 1406 aa15.68■□□□□ 0.1
ABR-208ENST00000570688 TNS3Q68CZ2 1445 aa15.68■□□□□ 0.1
ABR-208ENST00000570688 MED1Q15648 1581 aaPredicted RBP15.67■□□□□ 0.1
ABR-208ENST00000570688 NGDNQ8NEJ9 315 aaKnown RBP15.67■□□□□ 0.1
ABR-208ENST00000570688 TMF1P82094 1093 aa15.66■□□□□ 0.1
ABR-208ENST00000570688 LRRC59Q96AG4 307 aaKnown RBP15.66■□□□□ 0.1
ABR-208ENST00000570688 PIK3C2AO00443 1686 aa15.66■□□□□ 0.1
ABR-208ENST00000570688 A0A1W2PP64 1363 aa15.65■□□□□ 0.1
ABR-208ENST00000570688 PSME1Q06323 249 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms