RNA–Protein interactions for RNA: ENST00000570021.1

SIN3A-213, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 3

Gene SIN3A, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-213ENST00000570021 ZBTB24O43167 697 aaPredicted RBP10.68□□□□□ -0.7
SIN3A-213ENST00000570021 SMCPP49901 116 aaPredicted RBP10.68□□□□□ -0.7
SIN3A-213ENST00000570021 BRICD5Q6PL45 260 aa10.68□□□□□ -0.7
SIN3A-213ENST00000570021 PRDM9Q9NQV7 894 aa10.68□□□□□ -0.7
SIN3A-213ENST00000570021 C11orf95C9JLR9 678 aaPredicted RBP10.67□□□□□ -0.7
SIN3A-213ENST00000570021 GPR37O15354 613 aa10.67□□□□□ -0.7
SIN3A-213ENST00000570021 NLRP7Q8WX94 980 aa10.67□□□□□ -0.7
SIN3A-213ENST00000570021 GMPR2Q9P2T1 348 aaKnown RBP10.67□□□□□ -0.7
SIN3A-213ENST00000570021 MSS51Q4VC12 460 aa10.66□□□□□ -0.7
SIN3A-213ENST00000570021 TTC24A2A3L6 582 aaPredicted RBP10.65□□□□□ -0.7
SIN3A-213ENST00000570021 WFS1O76024 890 aa10.64□□□□□ -0.71
SIN3A-213ENST00000570021 GRIPAP1Q4V328 841 aa10.64□□□□□ -0.71
SIN3A-213ENST00000570021 RNF19BQ6ZMZ0 732 aa10.63□□□□□ -0.71
SIN3A-213ENST00000570021 PHOX2BQ99453 314 aa10.63□□□□□ -0.71
SIN3A-213ENST00000570021 WNT7AO00755 349 aa10.62□□□□□ -0.71
SIN3A-213ENST00000570021 Q3C1V9 767 aa10.6□□□□□ -0.71
SIN3A-213ENST00000570021 SMPD1P17405 629 aa10.59□□□□□ -0.71
SIN3A-213ENST00000570021 NFX1Q12986 1120 aaKnown RBP10.59□□□□□ -0.71
SIN3A-213ENST00000570021 TRIM32Q13049 653 aa10.59□□□□□ -0.71
SIN3A-213ENST00000570021 SNIP1Q8TAD8 396 aaKnown RBP10.59□□□□□ -0.71
SIN3A-213ENST00000570021 MMP16P51512 607 aa10.58□□□□□ -0.72
SIN3A-213ENST00000570021 MRGPRX2Q96LB1 330 aa10.56□□□□□ -0.72
SIN3A-213ENST00000570021 ATP13A2Q9NQ11 1180 aa10.56□□□□□ -0.72
SIN3A-213ENST00000570021 WIPF1O43516 503 aa10.54□□□□□ -0.72
SIN3A-213ENST00000570021 EIF4G1Q04637 1599 aaKnown RBP10.54□□□□□ -0.72
SIN3A-213ENST00000570021 GPIHBP1Q8IV16 184 aa10.54□□□□□ -0.72
SIN3A-213ENST00000570021 REPIN1Q9BWE0 567 aaKnown RBP10.54□□□□□ -0.72
SIN3A-213ENST00000570021 STK17AQ9UEE5 414 aa10.54□□□□□ -0.72
SIN3A-213ENST00000570021 J3QL48 77 aa10.53□□□□□ -0.72
SIN3A-213ENST00000570021 CD46P15529 392 aa10.53□□□□□ -0.72
SIN3A-213ENST00000570021 USB1Q9BQ65 265 aaKnown RBP10.53□□□□□ -0.72
SIN3A-213ENST00000570021 SENP2Q9HC62 589 aa10.53□□□□□ -0.72
SIN3A-213ENST00000570021 DXOO77932 396 aaKnown RBP10.52□□□□□ -0.73
SIN3A-213ENST00000570021 INSM1Q01101 510 aaPredicted RBP10.52□□□□□ -0.73
SIN3A-213ENST00000570021 MYO15BQ96JP2 1530 aa10.52□□□□□ -0.73
SIN3A-213ENST00000570021 SNRPBP14678 240 aaKnown RBP10.51□□□□□ -0.73
SIN3A-213ENST00000570021 TRIM47Q96LD4 638 aa10.51□□□□□ -0.73
SIN3A-213ENST00000570021 KDM4AO75164 1064 aa10.5□□□□□ -0.73
SIN3A-213ENST00000570021 TERTO14746 1132 aaKnown RBP10.49□□□□□ -0.73
SIN3A-213ENST00000570021 USP46P62068 366 aa10.48□□□□□ -0.73
SIN3A-213ENST00000570021 HPS1Q92902 700 aa10.48□□□□□ -0.73
SIN3A-213ENST00000570021 KIFC2Q96AC6 838 aa10.48□□□□□ -0.73
SIN3A-213ENST00000570021 WNT7BP56706 349 aa10.47□□□□□ -0.73
SIN3A-213ENST00000570021 RC3H1Q5TC82 1133 aaKnown RBP10.47□□□□□ -0.73
SIN3A-213ENST00000570021 CCDC24Q8N4L8 307 aa10.47□□□□□ -0.73
SIN3A-213ENST00000570021 SHROOM4Q9ULL8 1493 aa10.45□□□□□ -0.74
SIN3A-213ENST00000570021 SKOR1P84550 965 aa10.45□□□□□ -0.74
SIN3A-213ENST00000570021 MAP2K5Q13163 448 aa10.45□□□□□ -0.74
SIN3A-213ENST00000570021 LCE2CQ5TA81 110 aa10.44□□□□□ -0.74
SIN3A-213ENST00000570021 HLA-CQ95604 372 aa10.43□□□□□ -0.74
SIN3A-213ENST00000570021 HOXA2O43364 376 aa10.42□□□□□ -0.74
SIN3A-213ENST00000570021 MDM2Q00987 491 aaPredicted RBP10.41□□□□□ -0.74
SIN3A-213ENST00000570021 IRF6O14896 467 aa10.4□□□□□ -0.74
SIN3A-213ENST00000570021 ALDH1A1P00352 501 aa10.4□□□□□ -0.74
SIN3A-213ENST00000570021 PLCB2Q00722 1185 aa10.4□□□□□ -0.74
SIN3A-213ENST00000570021 JUNDP17535 347 aa10.39□□□□□ -0.75
SIN3A-213ENST00000570021 GUCA2AQ02747 115 aa10.37□□□□□ -0.75
SIN3A-213ENST00000570021 SLC16A10Q8TF71 515 aa10.37□□□□□ -0.75
SIN3A-213ENST00000570021 SCRIBQ14160 1630 aa10.36□□□□□ -0.75
SIN3A-213ENST00000570021 MINK1Q8N4C8 1332 aaPredicted RBP10.36□□□□□ -0.75
SIN3A-213ENST00000570021 CUX2O14529 1486 aa10.36□□□□□ -0.75
SIN3A-213ENST00000570021 SIAH2O43255 324 aa10.35□□□□□ -0.75
SIN3A-213ENST00000570021 RETREG3Q86VR2 466 aa10.35□□□□□ -0.75
SIN3A-213ENST00000570021 EHBP1Q8NDI1 1231 aa10.35□□□□□ -0.75
SIN3A-213ENST00000570021 NUDT12Q9BQG2 462 aa10.35□□□□□ -0.75
SIN3A-213ENST00000570021 NXF1Q9UBU9 619 aaKnown RBP10.35□□□□□ -0.75
SIN3A-213ENST00000570021 SYMPKQ92797 1274 aaKnown RBP10.34□□□□□ -0.75
SIN3A-213ENST00000570021 GPCPD1Q9NPB8 672 aa10.33□□□□□ -0.76
SIN3A-213ENST00000570021 WASF2Q9Y6W5 498 aa10.33□□□□□ -0.76
SIN3A-213ENST00000570021 FAM181BA6NEQ2 426 aa10.32□□□□□ -0.76
SIN3A-213ENST00000570021 CAPN5O15484 640 aaPredicted RBP10.32□□□□□ -0.76
SIN3A-213ENST00000570021 BMP1P13497 986 aa10.32□□□□□ -0.76
SIN3A-213ENST00000570021 CLCN1P35523 988 aa10.32□□□□□ -0.76
SIN3A-213ENST00000570021 PTCRAQ6ISU1 281 aaPredicted RBP10.32□□□□□ -0.76
SIN3A-213ENST00000570021 NUTM1Q86Y26 1132 aa10.32□□□□□ -0.76
SIN3A-213ENST00000570021 FAM217BQ9NTX9 383 aaPredicted RBP10.32□□□□□ -0.76
SIN3A-213ENST00000570021 TULP1O00294 542 aaPredicted RBP10.31□□□□□ -0.76
SIN3A-213ENST00000570021 NPAS3Q8IXF0 933 aa10.31□□□□□ -0.76
SIN3A-213ENST00000570021 CCDC102AQ96A19 550 aa10.31□□□□□ -0.76
SIN3A-213ENST00000570021 TRIM46Q7Z4K8 759 aa10.3□□□□□ -0.76
SIN3A-213ENST00000570021 CCNYL3P0C7X3 344 aa10.28□□□□□ -0.76
SIN3A-213ENST00000570021 SH3BP2P78314 561 aa10.28□□□□□ -0.76
SIN3A-213ENST00000570021 IRF7Q92985 503 aa10.28□□□□□ -0.76
SIN3A-213ENST00000570021 FDX1P10109 184 aa10.27□□□□□ -0.77
SIN3A-213ENST00000570021 MS4A1P11836 297 aa10.27□□□□□ -0.77
SIN3A-213ENST00000570021 GMPRP36959 345 aa10.27□□□□□ -0.77
SIN3A-213ENST00000570021 C6orf229H3BNL8 230 aa10.26□□□□□ -0.77
SIN3A-213ENST00000570021 KRI1Q8N9T8 703 aaKnown RBP10.26□□□□□ -0.77
SIN3A-213ENST00000570021 ZSCAN1Q8NBB4 408 aa10.25□□□□□ -0.77
SIN3A-213ENST00000570021 PCDHGC3Q9UN70 934 aa10.25□□□□□ -0.77
SIN3A-213ENST00000570021 ERCC6Q03468 1493 aa10.24□□□□□ -0.77
SIN3A-213ENST00000570021 ZCCHC6Q5VYS8 1495 aaKnown RBP10.24□□□□□ -0.77
SIN3A-213ENST00000570021 H3BM21 787 aa10.24□□□□□ -0.77
SIN3A-213ENST00000570021 PTPRNQ16849 979 aa10.24□□□□□ -0.77
SIN3A-213ENST00000570021 UNC93B1Q9H1C4 597 aa10.24□□□□□ -0.77
SIN3A-213ENST00000570021 DCAF1Q9Y4B6 1507 aa10.23□□□□□ -0.77
SIN3A-213ENST00000570021 VEGFBP49765 207 aa10.23□□□□□ -0.77
SIN3A-213ENST00000570021 EVA1BQ9NVM1 165 aa10.23□□□□□ -0.77
SIN3A-213ENST00000570021 LORP23490 312 aaPredicted RBP10.22□□□□□ -0.77
SIN3A-213ENST00000570021 HAP1P54257 671 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms