RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 DDX17Q92841 729 aaKnown RBP20.93■□□□□ 0.94
COMMD4-225ENST00000569245 ORAI2Q96SN7 254 aa20.93■□□□□ 0.94
COMMD4-225ENST00000569245 NUTM2FA1L443 756 aa20.92■□□□□ 0.94
COMMD4-225ENST00000569245 PRAM1Q96QH2 718 aa20.92■□□□□ 0.94
COMMD4-225ENST00000569245 TRAK1Q9UPV9 953 aa20.92■□□□□ 0.94
COMMD4-225ENST00000569245 ESCO1Q5FWF5 840 aa20.91■□□□□ 0.94
COMMD4-225ENST00000569245 AHDC1Q5TGY3 1603 aaPredicted RBP20.91■□□□□ 0.94
COMMD4-225ENST00000569245 LAMC1P11047 1609 aa20.9■□□□□ 0.94
COMMD4-225ENST00000569245 COL16A1Q07092 1604 aaPredicted RBP20.89■□□□□ 0.94
COMMD4-225ENST00000569245 NEUROD1Q13562 356 aa20.89■□□□□ 0.93
COMMD4-225ENST00000569245 LRRC59Q96AG4 307 aaKnown RBP20.89■□□□□ 0.93
COMMD4-225ENST00000569245 SIN3AQ96ST3 1273 aa20.88■□□□□ 0.93
COMMD4-225ENST00000569245 SPATA31A6Q5VVP1 1343 aa20.87■□□□□ 0.93
COMMD4-225ENST00000569245 MEX3CQ5U5Q3 659 aaKnown RBP20.87■□□□□ 0.93
COMMD4-225ENST00000569245 NUTM2BA6NNL0 878 aaPredicted RBP20.86■□□□□ 0.93
COMMD4-225ENST00000569245 NUTM2EB1AL46 878 aaPredicted RBP20.86■□□□□ 0.93
COMMD4-225ENST00000569245 NUTM2AQ8IVF1 878 aaPredicted RBP20.86■□□□□ 0.93
COMMD4-225ENST00000569245 KNDC1Q76NI1 1749 aa20.86■□□□□ 0.93
COMMD4-225ENST00000569245 CDC42BPGQ6DT37 1551 aa20.85■□□□□ 0.93
COMMD4-225ENST00000569245 ADGRB1O14514 1584 aa20.84■□□□□ 0.93
COMMD4-225ENST00000569245 FOXO3O43524 673 aa20.82■□□□□ 0.92
COMMD4-225ENST00000569245 L3MBTL2Q969R5 705 aa20.82■□□□□ 0.92
COMMD4-225ENST00000569245 HIRIP3Q9BW71 556 aaPredicted RBP20.82■□□□□ 0.92
COMMD4-225ENST00000569245 RGS17Q9UGC6 210 aaPredicted RBP20.82■□□□□ 0.92
COMMD4-225ENST00000569245 NPHP3Q7Z494 1330 aa20.81■□□□□ 0.92
COMMD4-225ENST00000569245 CCER1Q8TC90 406 aaPredicted RBP20.81■□□□□ 0.92
COMMD4-225ENST00000569245 DLC1Q96QB1 1528 aa20.81■□□□□ 0.92
COMMD4-225ENST00000569245 SOS2Q07890 1332 aaPredicted RBP20.8■□□□□ 0.92
COMMD4-225ENST00000569245 MINK1Q8N4C8 1332 aaPredicted RBP20.8■□□□□ 0.92
COMMD4-225ENST00000569245 NHSL1Q5SYE7 1610 aa20.8■□□□□ 0.92
COMMD4-225ENST00000569245 XPCQ01831 940 aaPredicted RBP20.8■□□□□ 0.92
COMMD4-225ENST00000569245 SOCS7O14512 581 aa20.79■□□□□ 0.92
COMMD4-225ENST00000569245 NBPF1Q3BBV0 1214 aa20.78■□□□□ 0.92
COMMD4-225ENST00000569245 PNPLA6Q8IY17 1366 aa20.77■□□□□ 0.92
COMMD4-225ENST00000569245 CLSPNQ9HAW4 1339 aa20.77■□□□□ 0.91
COMMD4-225ENST00000569245 LRP6O75581 1613 aa20.76■□□□□ 0.91
COMMD4-225ENST00000569245 PHF8Q9UPP1 1060 aa20.76■□□□□ 0.91
COMMD4-225ENST00000569245 SHPRHQ149N8 1683 aa20.76■□□□□ 0.91
COMMD4-225ENST00000569245 POTEAQ6S8J7 498 aa20.74■□□□□ 0.91
COMMD4-225ENST00000569245 WASLO00401 505 aaPredicted RBP20.73■□□□□ 0.91
COMMD4-225ENST00000569245 FMN2Q9NZ56 1722 aa20.73■□□□□ 0.91
COMMD4-225ENST00000569245 ADAMTS2O95450 1211 aa20.72■□□□□ 0.91
COMMD4-225ENST00000569245 KRT28Q7Z3Y7 464 aa20.72■□□□□ 0.91
COMMD4-225ENST00000569245 PSME1Q06323 249 aa20.71■□□□□ 0.91
COMMD4-225ENST00000569245 ZNF772Q68DY9 489 aaPredicted RBP20.71■□□□□ 0.91
COMMD4-225ENST00000569245 PMFBP1Q8TBY8 1022 aa20.71■□□□□ 0.91
COMMD4-225ENST00000569245 C8orf37Q96NL8 207 aa20.71■□□□□ 0.91
COMMD4-225ENST00000569245 EIF3AQ14152 1382 aaKnown RBP20.71■□□□□ 0.91
COMMD4-225ENST00000569245 PXDNQ92626 1479 aa20.69■□□□□ 0.9
COMMD4-225ENST00000569245 ANKARQ7Z5J8 1434 aa20.69■□□□□ 0.9
COMMD4-225ENST00000569245 KIAA1210Q9ULL0 1709 aa20.67■□□□□ 0.9
COMMD4-225ENST00000569245 LMOD2Q6P5Q4 547 aa20.67■□□□□ 0.9
COMMD4-225ENST00000569245 NGLY1Q96IV0 654 aa20.67■□□□□ 0.9
COMMD4-225ENST00000569245 CDK19Q9BWU1 502 aa20.67■□□□□ 0.9
COMMD4-225ENST00000569245 AFF2P51816 1311 aa20.67■□□□□ 0.9
COMMD4-225ENST00000569245 TONSLQ96HA7 1378 aa20.67■□□□□ 0.9
COMMD4-225ENST00000569245 ADGRB2O60241 1585 aa20.67■□□□□ 0.9
COMMD4-225ENST00000569245 KIF1AQ12756 1690 aa20.65■□□□□ 0.9
COMMD4-225ENST00000569245 SPATA31A3Q5VYP0 1347 aa20.65■□□□□ 0.9
COMMD4-225ENST00000569245 PRR36Q9H6K5 1346 aa20.65■□□□□ 0.9
COMMD4-225ENST00000569245 CENPJQ9HC77 1338 aaPredicted RBP20.65■□□□□ 0.9
COMMD4-225ENST00000569245 NGDNQ8NEJ9 315 aaKnown RBP20.65■□□□□ 0.9
COMMD4-225ENST00000569245 ROCK2O75116 1388 aaKnown RBP20.64■□□□□ 0.89
COMMD4-225ENST00000569245 PLEKHG5O94827 1062 aa20.64■□□□□ 0.89
COMMD4-225ENST00000569245 NUDT16Q96DE0 195 aaKnown RBP20.64■□□□□ 0.89
COMMD4-225ENST00000569245 ARHGEF28Q8N1W1 1705 aaKnown RBP20.63■□□□□ 0.89
COMMD4-225ENST00000569245 TULP4Q9NRJ4 1543 aa20.63■□□□□ 0.89
COMMD4-225ENST00000569245 GPRASP1Q5JY77 1395 aa20.62■□□□□ 0.89
COMMD4-225ENST00000569245 HAP1P54257 671 aaPredicted RBP20.62■□□□□ 0.89
COMMD4-225ENST00000569245 SRPK2P78362 688 aaKnown RBP20.61■□□□□ 0.89
COMMD4-225ENST00000569245 NBPF8Q3BBV2 869 aa20.61■□□□□ 0.89
COMMD4-225ENST00000569245 RGPD8O14715 1765 aaPredicted RBP20.61■□□□□ 0.89
COMMD4-225ENST00000569245 RXRBP28702 533 aa20.6■□□□□ 0.89
COMMD4-225ENST00000569245 USP32Q8NFA0 1604 aa20.6■□□□□ 0.89
COMMD4-225ENST00000569245 SBNO1A3KN83 1393 aa20.59■□□□□ 0.89
COMMD4-225ENST00000569245 ZEB1P37275 1124 aaPredicted RBP20.59■□□□□ 0.89
COMMD4-225ENST00000569245 TNS3Q68CZ2 1445 aa20.59■□□□□ 0.89
COMMD4-225ENST00000569245 PAK3O75914 559 aaPredicted RBP20.58■□□□□ 0.89
COMMD4-225ENST00000569245 QTRT2Q9H974 415 aaKnown RBP20.58■□□□□ 0.89
COMMD4-225ENST00000569245 USP21Q9UK80 565 aa20.58■□□□□ 0.89
COMMD4-225ENST00000569245 CCDC61Q9Y6R9 512 aa20.58■□□□□ 0.89
COMMD4-225ENST00000569245 CABLES1Q8TDN4 633 aa20.57■□□□□ 0.88
COMMD4-225ENST00000569245 CABP2Q9NPB3 220 aa20.57■□□□□ 0.88
COMMD4-225ENST00000569245 ARHGEF10O15013 1369 aa20.57■□□□□ 0.88
COMMD4-225ENST00000569245 COL22A1Q8NFW1 1626 aaPredicted RBP20.56■□□□□ 0.88
COMMD4-225ENST00000569245 CARD11Q9BXL7 1154 aa20.56■□□□□ 0.88
COMMD4-225ENST00000569245 ATP7BP35670 1465 aa20.55■□□□□ 0.88
COMMD4-225ENST00000569245 TRPM1Q7Z4N2 1603 aa20.54■□□□□ 0.88
COMMD4-225ENST00000569245 FNBP4Q8N3X1 1017 aaPredicted RBP20.54■□□□□ 0.88
COMMD4-225ENST00000569245 ACEP12821 1306 aa20.53■□□□□ 0.88
COMMD4-225ENST00000569245 EVC2Q86UK5 1308 aa20.53■□□□□ 0.88
COMMD4-225ENST00000569245 RBM6P78332 1123 aaKnown RBP20.52■□□□□ 0.88
COMMD4-225ENST00000569245 PLEKHG3A1L390 1219 aa20.51■□□□□ 0.87
COMMD4-225ENST00000569245 TRPC5Q9UL62 973 aaPredicted RBP20.51■□□□□ 0.87
COMMD4-225ENST00000569245 PPIP5K1Q6PFW1 1433 aa20.48■□□□□ 0.87
COMMD4-225ENST00000569245 CABP1Q9NZU7 370 aa20.48■□□□□ 0.87
COMMD4-225ENST00000569245 TIMELESSQ9UNS1 1208 aa20.48■□□□□ 0.87
COMMD4-225ENST00000569245 QRICH2Q9H0J4 1663 aa20.48■□□□□ 0.87
COMMD4-225ENST00000569245 POLR3AO14802 1390 aaPredicted RBP20.46■□□□□ 0.87
COMMD4-225ENST00000569245 NUTM2GQ5VZR2 741 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms