RNA–Protein interactions for RNA: ENST00000567377.5

COMMD4-218, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-218ENST00000567377 WAPLQ7Z5K2 1190 aa26.46■■□□□ 1.83
COMMD4-218ENST00000567377 CDC42BPGQ6DT37 1551 aa26.45■■□□□ 1.82
COMMD4-218ENST00000567377 NHSL1Q5SYE7 1610 aa26.43■■□□□ 1.82
COMMD4-218ENST00000567377 KDM2AQ9Y2K7 1162 aa26.43■■□□□ 1.82
COMMD4-218ENST00000567377 SHPRHQ149N8 1683 aa26.41■■□□□ 1.82
COMMD4-218ENST00000567377 ORAI2Q96SN7 254 aa26.4■■□□□ 1.82
COMMD4-218ENST00000567377 RGS17Q9UGC6 210 aaPredicted RBP26.4■■□□□ 1.82
COMMD4-218ENST00000567377 PLEKHH1Q9ULM0 1364 aa26.37■■□□□ 1.81
COMMD4-218ENST00000567377 ESCO1Q5FWF5 840 aa26.37■■□□□ 1.81
COMMD4-218ENST00000567377 DLC1Q96QB1 1528 aa26.37■■□□□ 1.81
COMMD4-218ENST00000567377 SOS2Q07890 1332 aaPredicted RBP26.37■■□□□ 1.81
COMMD4-218ENST00000567377 MEX3CQ5U5Q3 659 aaKnown RBP26.36■■□□□ 1.81
COMMD4-218ENST00000567377 POGKQ9P215 609 aa26.36■■□□□ 1.81
COMMD4-218ENST00000567377 NPHP3Q7Z494 1330 aa26.36■■□□□ 1.81
COMMD4-218ENST00000567377 DDX17Q92841 729 aaKnown RBP26.34■■□□□ 1.81
COMMD4-218ENST00000567377 PRAM1Q96QH2 718 aa26.34■■□□□ 1.81
COMMD4-218ENST00000567377 ADGRB1O14514 1584 aa26.33■■□□□ 1.81
COMMD4-218ENST00000567377 PNPLA6Q8IY17 1366 aa26.31■■□□□ 1.8
COMMD4-218ENST00000567377 ZNF772Q68DY9 489 aaPredicted RBP26.3■■□□□ 1.8
COMMD4-218ENST00000567377 LRP6O75581 1613 aa26.29■■□□□ 1.8
COMMD4-218ENST00000567377 TRAK1Q9UPV9 953 aa26.29■■□□□ 1.8
COMMD4-218ENST00000567377 NUTM2BA6NNL0 878 aaPredicted RBP26.28■■□□□ 1.8
COMMD4-218ENST00000567377 NUTM2EB1AL46 878 aaPredicted RBP26.28■■□□□ 1.8
COMMD4-218ENST00000567377 NUTM2AQ8IVF1 878 aaPredicted RBP26.28■■□□□ 1.8
COMMD4-218ENST00000567377 POTEAQ6S8J7 498 aa26.27■■□□□ 1.8
COMMD4-218ENST00000567377 FMN2Q9NZ56 1722 aa26.27■■□□□ 1.8
COMMD4-218ENST00000567377 NUTM2FA1L443 756 aa26.26■■□□□ 1.79
COMMD4-218ENST00000567377 FOXO3O43524 673 aa26.26■■□□□ 1.79
COMMD4-218ENST00000567377 SAFB2Q14151 953 aaKnown RBP eCLIP26.25■■□□□ 1.79
COMMD4-218ENST00000567377 EIF3AQ14152 1382 aaKnown RBP26.24■■□□□ 1.79
COMMD4-218ENST00000567377 ANKARQ7Z5J8 1434 aa26.22■■□□□ 1.79
COMMD4-218ENST00000567377 KIF1AQ12756 1690 aa26.22■■□□□ 1.79
COMMD4-218ENST00000567377 TRIM26Q12899 539 aaPredicted RBP26.21■■□□□ 1.79
COMMD4-218ENST00000567377 PHF8Q9UPP1 1060 aa26.21■■□□□ 1.79
COMMD4-218ENST00000567377 KIAA1210Q9ULL0 1709 aa26.21■■□□□ 1.79
COMMD4-218ENST00000567377 PXDNQ92626 1479 aa26.21■■□□□ 1.79
COMMD4-218ENST00000567377 ADGRB2O60241 1585 aa26.2■■□□□ 1.79
COMMD4-218ENST00000567377 PSME1Q06323 249 aa26.19■■□□□ 1.78
COMMD4-218ENST00000567377 WASLO00401 505 aaPredicted RBP26.17■■□□□ 1.78
COMMD4-218ENST00000567377 MINK1Q8N4C8 1332 aaPredicted RBP26.16■■□□□ 1.78
COMMD4-218ENST00000567377 KRT28Q7Z3Y7 464 aa26.16■■□□□ 1.78
COMMD4-218ENST00000567377 AFF2P51816 1311 aa26.15■■□□□ 1.78
COMMD4-218ENST00000567377 L3MBTL2Q969R5 705 aa26.15■■□□□ 1.78
COMMD4-218ENST00000567377 COL22A1Q8NFW1 1626 aaPredicted RBP26.14■■□□□ 1.78
COMMD4-218ENST00000567377 XPCQ01831 940 aaPredicted RBP26.14■■□□□ 1.78
COMMD4-218ENST00000567377 C8orf37Q96NL8 207 aa26.14■■□□□ 1.78
COMMD4-218ENST00000567377 HIRIP3Q9BW71 556 aaPredicted RBP26.14■■□□□ 1.78
COMMD4-218ENST00000567377 SPATA31A3Q5VYP0 1347 aa26.14■■□□□ 1.77
COMMD4-218ENST00000567377 NGLY1Q96IV0 654 aa26.13■■□□□ 1.77
COMMD4-218ENST00000567377 ADAMTS2O95450 1211 aa26.12■■□□□ 1.77
COMMD4-218ENST00000567377 SIN3AQ96ST3 1273 aa26.12■■□□□ 1.77
COMMD4-218ENST00000567377 RXRBP28702 533 aa26.11■■□□□ 1.77
COMMD4-218ENST00000567377 SBNO1A3KN83 1393 aa26.1■■□□□ 1.77
COMMD4-218ENST00000567377 NEUROD1Q13562 356 aa26.1■■□□□ 1.77
COMMD4-218ENST00000567377 NBPF1Q3BBV0 1214 aa26.1■■□□□ 1.77
COMMD4-218ENST00000567377 ARHGEF28Q8N1W1 1705 aaKnown RBP26.1■■□□□ 1.77
COMMD4-218ENST00000567377 RGPD8O14715 1765 aaPredicted RBP26.1■■□□□ 1.77
COMMD4-218ENST00000567377 TULP4Q9NRJ4 1543 aa26.09■■□□□ 1.77
COMMD4-218ENST00000567377 FNBP4Q8N3X1 1017 aaPredicted RBP26.06■■□□□ 1.76
COMMD4-218ENST00000567377 PMFBP1Q8TBY8 1022 aa26.06■■□□□ 1.76
COMMD4-218ENST00000567377 QTRT2Q9H974 415 aaKnown RBP26.06■■□□□ 1.76
COMMD4-218ENST00000567377 ARHGEF10O15013 1369 aa26.06■■□□□ 1.76
COMMD4-218ENST00000567377 GPRASP1Q5JY77 1395 aa26.06■■□□□ 1.76
COMMD4-218ENST00000567377 TNS3Q68CZ2 1445 aa26.05■■□□□ 1.76
COMMD4-218ENST00000567377 USP32Q8NFA0 1604 aa26.05■■□□□ 1.76
COMMD4-218ENST00000567377 PRR36Q9H6K5 1346 aa26.04■■□□□ 1.76
COMMD4-218ENST00000567377 CDK12Q9NYV4 1490 aaPredicted RBP26.04■■□□□ 1.76
COMMD4-218ENST00000567377 RBM6P78332 1123 aaKnown RBP26.03■■□□□ 1.76
COMMD4-218ENST00000567377 NUDT16Q96DE0 195 aaKnown RBP26.03■■□□□ 1.76
COMMD4-218ENST00000567377 CDK19Q9BWU1 502 aa26.03■■□□□ 1.76
COMMD4-218ENST00000567377 NGDNQ8NEJ9 315 aaKnown RBP26.02■■□□□ 1.76
COMMD4-218ENST00000567377 USP21Q9UK80 565 aa26.02■■□□□ 1.76
COMMD4-218ENST00000567377 CENPJQ9HC77 1338 aaPredicted RBP26.02■■□□□ 1.76
COMMD4-218ENST00000567377 TRPC5Q9UL62 973 aaPredicted RBP26■■□□□ 1.75
COMMD4-218ENST00000567377 CCDC61Q9Y6R9 512 aa25.99■■□□□ 1.75
COMMD4-218ENST00000567377 HAP1P54257 671 aaPredicted RBP25.98■■□□□ 1.75
COMMD4-218ENST00000567377 LMOD2Q6P5Q4 547 aa25.98■■□□□ 1.75
COMMD4-218ENST00000567377 ATP7BP35670 1465 aa25.97■■□□□ 1.75
COMMD4-218ENST00000567377 ITSN1Q15811 1721 aa25.96■■□□□ 1.75
COMMD4-218ENST00000567377 ROCK2O75116 1388 aaKnown RBP25.95■■□□□ 1.75
COMMD4-218ENST00000567377 MARF1Q9Y4F3 1742 aaKnown RBP25.94■■□□□ 1.74
COMMD4-218ENST00000567377 PLEKHG3A1L390 1219 aa25.94■■□□□ 1.74
COMMD4-218ENST00000567377 TONSLQ96HA7 1378 aa25.94■■□□□ 1.74
COMMD4-218ENST00000567377 TRPM1Q7Z4N2 1603 aa25.93■■□□□ 1.74
COMMD4-218ENST00000567377 SRPK2P78362 688 aaKnown RBP25.92■■□□□ 1.74
COMMD4-218ENST00000567377 ATRNO75882 1429 aa25.91■■□□□ 1.74
COMMD4-218ENST00000567377 POLR3AO14802 1390 aaPredicted RBP25.91■■□□□ 1.74
COMMD4-218ENST00000567377 BCL9LQ86UU0 1499 aa25.91■■□□□ 1.74
COMMD4-218ENST00000567377 UNC5CLQ8IV45 518 aa25.9■■□□□ 1.74
COMMD4-218ENST00000567377 TRPM3Q9HCF6 1732 aaPredicted RBP25.89■■□□□ 1.74
COMMD4-218ENST00000567377 PAK3O75914 559 aaPredicted RBP25.89■■□□□ 1.74
COMMD4-218ENST00000567377 CABLES1Q8TDN4 633 aa25.89■■□□□ 1.74
COMMD4-218ENST00000567377 EVC2Q86UK5 1308 aa25.88■■□□□ 1.73
COMMD4-218ENST00000567377 NBPF8Q3BBV2 869 aa25.88■■□□□ 1.73
COMMD4-218ENST00000567377 SLIT2O94813 1529 aa25.88■■□□□ 1.73
COMMD4-218ENST00000567377 ACEP12821 1306 aa25.88■■□□□ 1.73
COMMD4-218ENST00000567377 ALS2Q96Q42 1657 aa25.86■■□□□ 1.73
COMMD4-218ENST00000567377 BRD4O60885 1362 aaPredicted RBP25.85■■□□□ 1.73
COMMD4-218ENST00000567377 QRICH2Q9H0J4 1663 aa25.85■■□□□ 1.73
COMMD4-218ENST00000567377 TOPAZ1Q8N9V7 1692 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms