RNA–Protein interactions for RNA: ENST00000567212.5

UBFD1-207, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBFD1, Length 4,727 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-207ENST00000567212 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.06■□□□□ 0.166e-7■■□□□ 11.7
UBFD1-207ENST00000567212 ZNF830Q96NB3 372 aaPredicted RBP16.06■□□□□ 0.16
UBFD1-207ENST00000567212 RIPK4P57078 832 aa16.06■□□□□ 0.16
UBFD1-207ENST00000567212 PDILTQ8N807 584 aa16.06■□□□□ 0.16
UBFD1-207ENST00000567212 ERCC6Q03468 1493 aa16.06■□□□□ 0.16
UBFD1-207ENST00000567212 PDE3AQ14432 1141 aa16.06■□□□□ 0.16
UBFD1-207ENST00000567212 GPATCH11Q8N954 259 aa16.06■□□□□ 0.16
UBFD1-207ENST00000567212 SDF4Q9BRK5 362 aa16.05■□□□□ 0.16
UBFD1-207ENST00000567212 RABEP1Q15276 862 aa16.05■□□□□ 0.16
UBFD1-207ENST00000567212 RASSF8Q8NHQ8 419 aa16.05■□□□□ 0.16
UBFD1-207ENST00000567212 USP25Q9UHP3 1055 aa16.05■□□□□ 0.16
UBFD1-207ENST00000567212 POLR3GO15318 223 aaPredicted RBP16.05■□□□□ 0.16
UBFD1-207ENST00000567212 CALRP27797 417 aaKnown RBP16.05■□□□□ 0.16
UBFD1-207ENST00000567212 HDGFL2Q7Z4V5 671 aaPredicted RBP16.05■□□□□ 0.16
UBFD1-207ENST00000567212 NECTIN2Q92692 538 aa16.05■□□□□ 0.16
UBFD1-207ENST00000567212 GTF2F1P35269 517 aaKnown RBP eCLIP16.04■□□□□ 0.16
UBFD1-207ENST00000567212 TCP11L2Q8N4U5 519 aa16.04■□□□□ 0.16
UBFD1-207ENST00000567212 CEBPZQ03701 1054 aaKnown RBP16.04■□□□□ 0.16
UBFD1-207ENST00000567212 IPO4Q8TEX9 1081 aaKnown RBP16.04■□□□□ 0.16
UBFD1-207ENST00000567212 BICRAQ9NZM4 1560 aa16.04■□□□□ 0.16
UBFD1-207ENST00000567212 DYNC1I1O14576 645 aa16.04■□□□□ 0.16
UBFD1-207ENST00000567212 ZKSCAN1P17029 563 aaPredicted RBP16.04■□□□□ 0.16
UBFD1-207ENST00000567212 HNRNPMP52272 730 aaKnown RBP eCLIP16.04■□□□□ 0.169e-7■■■□□ 15.8
UBFD1-207ENST00000567212 ZNF644Q9H582 1327 aaPredicted RBP16.04■□□□□ 0.16
UBFD1-207ENST00000567212 RDXP35241 583 aaKnown RBP16.03■□□□□ 0.16
UBFD1-207ENST00000567212 GPATCH3Q96I76 525 aa16.03■□□□□ 0.16
UBFD1-207ENST00000567212 CIZ1Q9ULV3 898 aaPredicted RBP16.03■□□□□ 0.16
UBFD1-207ENST00000567212 SMC2O95347 1197 aa16.03■□□□□ 0.16
UBFD1-207ENST00000567212 TSR2Q969E8 191 aaKnown RBP16.03■□□□□ 0.16
UBFD1-207ENST00000567212 DEF6Q9H4E7 631 aa16.03■□□□□ 0.16
UBFD1-207ENST00000567212 CCDC73Q6ZRK6 1079 aa16.02■□□□□ 0.16
UBFD1-207ENST00000567212 TSPYL1Q9H0U9 437 aa16.02■□□□□ 0.16
UBFD1-207ENST00000567212 C16orf45Q96MC5 204 aaPredicted RBP16.02■□□□□ 0.16
UBFD1-207ENST00000567212 RBM27Q9P2N5 1060 aaKnown RBP16.02■□□□□ 0.16
UBFD1-207ENST00000567212 RUNDC1Q96C34 613 aa16.02■□□□□ 0.15
UBFD1-207ENST00000567212 TSR1Q2NL82 804 aaKnown RBP16.02■□□□□ 0.15
UBFD1-207ENST00000567212 NCAPD3P42695 1498 aa16.01■□□□□ 0.15
UBFD1-207ENST00000567212 AK7Q96M32 723 aa16.01■□□□□ 0.15
UBFD1-207ENST00000567212 CCDC34Q96HJ3 373 aa16.01■□□□□ 0.15
UBFD1-207ENST00000567212 AXDND1Q5T1B0 1012 aaPredicted RBP16.01■□□□□ 0.15
UBFD1-207ENST00000567212 CLSTN1O94985 981 aa16■□□□□ 0.15
UBFD1-207ENST00000567212 EXOSC9Q06265 439 aaKnown RBP16■□□□□ 0.15
UBFD1-207ENST00000567212 EIF3AQ14152 1382 aaKnown RBP16■□□□□ 0.15
UBFD1-207ENST00000567212 PLCD4Q9BRC7 762 aa16■□□□□ 0.15
UBFD1-207ENST00000567212 GDPD2Q9HCC8 539 aa16■□□□□ 0.15
UBFD1-207ENST00000567212 ANKRD30AQ9BXX3 1397 aa15.99■□□□□ 0.15
UBFD1-207ENST00000567212 CCDC192P0DO97 292 aa15.99■□□□□ 0.15
UBFD1-207ENST00000567212 TOMM22Q9NS69 142 aa15.99■□□□□ 0.15
UBFD1-207ENST00000567212 TPM1P09493 284 aa15.99■□□□□ 0.15
UBFD1-207ENST00000567212 PPP2R1AP30153 589 aa15.99■□□□□ 0.15
UBFD1-207ENST00000567212 CCDC70Q6NSX1 233 aa15.99■□□□□ 0.15
UBFD1-207ENST00000567212 CALCOCO1Q9P1Z2 691 aa15.99■□□□□ 0.15
UBFD1-207ENST00000567212 RUFY1Q96T51 708 aa15.98■□□□□ 0.15
UBFD1-207ENST00000567212 GGT6Q6P531 493 aa15.98■□□□□ 0.15
UBFD1-207ENST00000567212 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.98■□□□□ 0.15
UBFD1-207ENST00000567212 PDS5BQ9NTI5 1447 aa15.98■□□□□ 0.15
UBFD1-207ENST00000567212 TNNT1P13805 278 aa15.98■□□□□ 0.15
UBFD1-207ENST00000567212 ACBD3Q9H3P7 528 aa15.98■□□□□ 0.15
UBFD1-207ENST00000567212 LETM1O95202 739 aaPredicted RBP15.97■□□□□ 0.15
UBFD1-207ENST00000567212 CWC22Q9HCG8 908 aaKnown RBP15.97■□□□□ 0.15
UBFD1-207ENST00000567212 ZNF330Q9Y3S2 320 aaPredicted RBP15.97■□□□□ 0.15
UBFD1-207ENST00000567212 ZBTB9Q96C00 473 aa15.96■□□□□ 0.15
UBFD1-207ENST00000567212 UACAQ9BZF9 1416 aa15.96■□□□□ 0.15
UBFD1-207ENST00000567212 CAMK4Q16566 473 aa15.96■□□□□ 0.15
UBFD1-207ENST00000567212 NOB1Q9ULX3 412 aaKnown RBP15.96■□□□□ 0.15
UBFD1-207ENST00000567212 SPAG9O60271 1321 aaKnown RBP15.96■□□□□ 0.14
UBFD1-207ENST00000567212 IGHDP01880 384 aa15.96■□□□□ 0.14
UBFD1-207ENST00000567212 UBXN4Q92575 508 aa15.96■□□□□ 0.14
UBFD1-207ENST00000567212 TRMT1Q9NXH9 659 aaKnown RBP15.96■□□□□ 0.14
UBFD1-207ENST00000567212 AAMPQ13685 434 aa15.95■□□□□ 0.14
UBFD1-207ENST00000567212 IPO7O95373 1038 aaKnown RBP15.95■□□□□ 0.14
UBFD1-207ENST00000567212 TIGD1Q96MW7 591 aa15.95■□□□□ 0.14
UBFD1-207ENST00000567212 API5Q9BZZ5 524 aaKnown RBP15.95■□□□□ 0.14
UBFD1-207ENST00000567212 TNMDQ9H2S6 317 aa15.95■□□□□ 0.14
UBFD1-207ENST00000567212 CUX1P39880 1505 aa15.95■□□□□ 0.14
UBFD1-207ENST00000567212 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.94■□□□□ 0.14
UBFD1-207ENST00000567212 KDM4AO75164 1064 aa15.94■□□□□ 0.14
UBFD1-207ENST00000567212 PCMTD1Q96MG8 357 aaPredicted RBP15.94■□□□□ 0.14
UBFD1-207ENST00000567212 OFD1O75665 1012 aa15.94■□□□□ 0.14
UBFD1-207ENST00000567212 CENPHQ9H3R5 247 aa15.94■□□□□ 0.14
UBFD1-207ENST00000567212 NBPF1Q3BBV0 1214 aa15.94■□□□□ 0.14
UBFD1-207ENST00000567212 AQRO60306 1485 aaKnown RBP eCLIP15.93■□□□□ 0.141e-6■■■■■ 29.3
UBFD1-207ENST00000567212 HMOX1P09601 288 aa15.93■□□□□ 0.14
UBFD1-207ENST00000567212 CHD1LQ86WJ1 897 aa15.93■□□□□ 0.14
UBFD1-207ENST00000567212 TTC12Q9H892 705 aaPredicted RBP15.93■□□□□ 0.14
UBFD1-207ENST00000567212 NUTM2FA1L443 756 aa15.93■□□□□ 0.14
UBFD1-207ENST00000567212 BAG4O95429 457 aaKnown RBP15.93■□□□□ 0.14
UBFD1-207ENST00000567212 RUFY2Q8WXA3 655 aa15.93■□□□□ 0.14
UBFD1-207ENST00000567212 MTHFSP49914 203 aa15.93■□□□□ 0.14
UBFD1-207ENST00000567212 JPH4Q96JJ6 628 aa15.93■□□□□ 0.14
UBFD1-207ENST00000567212 TERF2IPQ9NYB0 399 aa15.93■□□□□ 0.14
UBFD1-207ENST00000567212 C8orf34Q49A92 452 aa15.92■□□□□ 0.14
UBFD1-207ENST00000567212 NGEFQ8N5V2 710 aa15.92■□□□□ 0.14
UBFD1-207ENST00000567212 CCDC102AQ96A19 550 aa15.92■□□□□ 0.14
UBFD1-207ENST00000567212 UPF3BQ9BZI7 483 aaKnown RBP15.92■□□□□ 0.14
UBFD1-207ENST00000567212 KINO60870 393 aaKnown RBP15.92■□□□□ 0.14
UBFD1-207ENST00000567212 TMCO3Q6UWJ1 677 aa15.92■□□□□ 0.14
UBFD1-207ENST00000567212 MVPQ14764 893 aaKnown RBP15.92■□□□□ 0.14
UBFD1-207ENST00000567212 PTPN14Q15678 1187 aa15.92■□□□□ 0.14
UBFD1-207ENST00000567212 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms