RNA–Protein interactions for RNA: ENST00000566905.5

PKD1-232, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 559 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-232ENST00000566905 DISP3Q9P2K9 1392 aa27.52■■■□□ 2
PKD1-232ENST00000566905 SAFB2Q14151 953 aaKnown RBP eCLIP27.52■■■□□ 2
PKD1-232ENST00000566905 PCGF6Q9BYE7 350 aa27.52■■■□□ 2
PKD1-232ENST00000566905 DLC1Q96QB1 1528 aa27.51■■■□□ 2
PKD1-232ENST00000566905 C1orf167Q5SNV9 1468 aa27.51■■■□□ 2
PKD1-232ENST00000566905 PRAM1Q96QH2 718 aa27.51■■□□□ 1.99
PKD1-232ENST00000566905 COL16A1Q07092 1604 aaPredicted RBP27.51■■□□□ 1.99
PKD1-232ENST00000566905 AHDC1Q5TGY3 1603 aaPredicted RBP27.51■■□□□ 1.99
PKD1-232ENST00000566905 POGKQ9P215 609 aa27.5■■□□□ 1.99
PKD1-232ENST00000566905 MED1Q15648 1581 aaPredicted RBP27.5■■□□□ 1.99
PKD1-232ENST00000566905 NHSL1Q5SYE7 1610 aa27.48■■□□□ 1.99
PKD1-232ENST00000566905 FMN2Q9NZ56 1722 aa27.47■■□□□ 1.99
PKD1-232ENST00000566905 NUTM2FA1L443 756 aa27.46■■□□□ 1.99
PKD1-232ENST00000566905 ARHGEF28Q8N1W1 1705 aaKnown RBP27.46■■□□□ 1.99
PKD1-232ENST00000566905 ORAI2Q96SN7 254 aa27.45■■□□□ 1.98
PKD1-232ENST00000566905 NBPF1Q3BBV0 1214 aa27.43■■□□□ 1.98
PKD1-232ENST00000566905 DDX17Q92841 729 aaKnown RBP27.42■■□□□ 1.98
PKD1-232ENST00000566905 RGPD8O14715 1765 aaPredicted RBP27.41■■□□□ 1.98
PKD1-232ENST00000566905 JCADQ9P266 1359 aa27.41■■□□□ 1.98
PKD1-232ENST00000566905 ESCO1Q5FWF5 840 aa27.4■■□□□ 1.98
PKD1-232ENST00000566905 TRPM1Q7Z4N2 1603 aa27.39■■□□□ 1.98
PKD1-232ENST00000566905 MINK1Q8N4C8 1332 aaPredicted RBP27.39■■□□□ 1.97
PKD1-232ENST00000566905 TONSLQ96HA7 1378 aa27.38■■□□□ 1.97
PKD1-232ENST00000566905 HIRIP3Q9BW71 556 aaPredicted RBP27.38■■□□□ 1.97
PKD1-232ENST00000566905 ADGRB2O60241 1585 aa27.37■■□□□ 1.97
PKD1-232ENST00000566905 SHPRHQ149N8 1683 aa27.36■■□□□ 1.97
PKD1-232ENST00000566905 PHF23Q9BUL5 403 aaPredicted RBP27.33■■□□□ 1.97
PKD1-232ENST00000566905 KIF1AQ12756 1690 aa27.31■■□□□ 1.96
PKD1-232ENST00000566905 LRRC59Q96AG4 307 aaKnown RBP27.3■■□□□ 1.96
PKD1-232ENST00000566905 USP32Q8NFA0 1604 aa27.3■■□□□ 1.96
PKD1-232ENST00000566905 NBPF8Q3BBV2 869 aa27.29■■□□□ 1.96
PKD1-232ENST00000566905 ROCK2O75116 1388 aaKnown RBP27.28■■□□□ 1.96
PKD1-232ENST00000566905 NPHP3Q7Z494 1330 aa27.28■■□□□ 1.96
PKD1-232ENST00000566905 FOXO3O43524 673 aa27.28■■□□□ 1.96
PKD1-232ENST00000566905 SOS2Q07890 1332 aaPredicted RBP27.27■■□□□ 1.96
PKD1-232ENST00000566905 SPATA31A6Q5VVP1 1343 aa27.26■■□□□ 1.95
PKD1-232ENST00000566905 WASLO00401 505 aaPredicted RBP27.26■■□□□ 1.95
PKD1-232ENST00000566905 XPCQ01831 940 aaPredicted RBP27.26■■□□□ 1.95
PKD1-232ENST00000566905 ANKARQ7Z5J8 1434 aa27.25■■□□□ 1.95
PKD1-232ENST00000566905 QRICH2Q9H0J4 1663 aa27.25■■□□□ 1.95
PKD1-232ENST00000566905 EIF3AQ14152 1382 aaKnown RBP27.24■■□□□ 1.95
PKD1-232ENST00000566905 PHF8Q9UPP1 1060 aa27.24■■□□□ 1.95
PKD1-232ENST00000566905 TULP4Q9NRJ4 1543 aa27.24■■□□□ 1.95
PKD1-232ENST00000566905 PXDNQ92626 1479 aa27.24■■□□□ 1.95
PKD1-232ENST00000566905 LRP6O75581 1613 aa27.23■■□□□ 1.95
PKD1-232ENST00000566905 PNPLA6Q8IY17 1366 aa27.23■■□□□ 1.95
PKD1-232ENST00000566905 CENPJQ9HC77 1338 aaPredicted RBP27.23■■□□□ 1.95
PKD1-232ENST00000566905 NUTM2BA6NNL0 878 aaPredicted RBP27.23■■□□□ 1.95
PKD1-232ENST00000566905 NUTM2EB1AL46 878 aaPredicted RBP27.23■■□□□ 1.95
PKD1-232ENST00000566905 NUTM2AQ8IVF1 878 aaPredicted RBP27.23■■□□□ 1.95
PKD1-232ENST00000566905 ILDR2Q71H61 639 aa27.21■■□□□ 1.95
PKD1-232ENST00000566905 PRR36Q9H6K5 1346 aa27.2■■□□□ 1.95
PKD1-232ENST00000566905 MEX3CQ5U5Q3 659 aaKnown RBP27.2■■□□□ 1.94
PKD1-232ENST00000566905 PMFBP1Q8TBY8 1022 aa27.2■■□□□ 1.94
PKD1-232ENST00000566905 ITSN1Q15811 1721 aa27.19■■□□□ 1.94
PKD1-232ENST00000566905 CDK19Q9BWU1 502 aa27.18■■□□□ 1.94
PKD1-232ENST00000566905 RALGAPBQ86X10 1494 aa27.17■■□□□ 1.94
PKD1-232ENST00000566905 KRT28Q7Z3Y7 464 aa27.16■■□□□ 1.94
PKD1-232ENST00000566905 GPRASP1Q5JY77 1395 aa27.16■■□□□ 1.94
PKD1-232ENST00000566905 CLSPNQ9HAW4 1339 aa27.16■■□□□ 1.94
PKD1-232ENST00000566905 ATP7BP35670 1465 aa27.15■■□□□ 1.94
PKD1-232ENST00000566905 NUDT16Q96DE0 195 aaKnown RBP27.15■■□□□ 1.94
PKD1-232ENST00000566905 CARD11Q9BXL7 1154 aa27.15■■□□□ 1.94
PKD1-232ENST00000566905 PSME1Q06323 249 aa27.14■■□□□ 1.94
PKD1-232ENST00000566905 CCER1Q8TC90 406 aaPredicted RBP27.14■■□□□ 1.94
PKD1-232ENST00000566905 COL22A1Q8NFW1 1626 aaPredicted RBP27.13■■□□□ 1.93
PKD1-232ENST00000566905 RGS17Q9UGC6 210 aaPredicted RBP27.13■■□□□ 1.93
PKD1-232ENST00000566905 SRPK2P78362 688 aaKnown RBP27.11■■□□□ 1.93
PKD1-232ENST00000566905 TOPAZ1Q8N9V7 1692 aa27.11■■□□□ 1.93
PKD1-232ENST00000566905 SPATA31A3Q5VYP0 1347 aa27.1■■□□□ 1.93
PKD1-232ENST00000566905 NGDNQ8NEJ9 315 aaKnown RBP27.09■■□□□ 1.93
PKD1-232ENST00000566905 ADAMTS2O95450 1211 aa27.08■■□□□ 1.93
PKD1-232ENST00000566905 CABP2Q9NPB3 220 aa27.07■■□□□ 1.92
PKD1-232ENST00000566905 TNS3Q68CZ2 1445 aa27.07■■□□□ 1.92
PKD1-232ENST00000566905 LMOD2Q6P5Q4 547 aa27.06■■□□□ 1.92
PKD1-232ENST00000566905 TRPM3Q9HCF6 1732 aaPredicted RBP27.06■■□□□ 1.92
PKD1-232ENST00000566905 CCDC61Q9Y6R9 512 aa27.05■■□□□ 1.92
PKD1-232ENST00000566905 C8orf37Q96NL8 207 aa27.04■■□□□ 1.92
PKD1-232ENST00000566905 EVC2Q86UK5 1308 aa27.04■■□□□ 1.92
PKD1-232ENST00000566905 SBNO1A3KN83 1393 aa27.04■■□□□ 1.92
PKD1-232ENST00000566905 PLEKHG5O94827 1062 aa27.03■■□□□ 1.92
PKD1-232ENST00000566905 POTEAQ6S8J7 498 aa27.03■■□□□ 1.92
PKD1-232ENST00000566905 TIMELESSQ9UNS1 1208 aa27.02■■□□□ 1.92
PKD1-232ENST00000566905 MARF1Q9Y4F3 1742 aaKnown RBP27.02■■□□□ 1.92
PKD1-232ENST00000566905 PPIP5K1Q6PFW1 1433 aa27.01■■□□□ 1.91
PKD1-232ENST00000566905 ACEP12821 1306 aa27■■□□□ 1.91
PKD1-232ENST00000566905 AFF2P51816 1311 aa27■■□□□ 1.91
PKD1-232ENST00000566905 ALS2Q96Q42 1657 aa26.99■■□□□ 1.91
PKD1-232ENST00000566905 PAK3O75914 559 aaPredicted RBP26.99■■□□□ 1.91
PKD1-232ENST00000566905 ARHGEF10O15013 1369 aa26.98■■□□□ 1.91
PKD1-232ENST00000566905 ZNF772Q68DY9 489 aaPredicted RBP26.98■■□□□ 1.91
PKD1-232ENST00000566905 NGLY1Q96IV0 654 aa26.98■■□□□ 1.91
PKD1-232ENST00000566905 ABCA3Q99758 1704 aa26.97■■□□□ 1.91
PKD1-232ENST00000566905 PLEKHG3A1L390 1219 aa26.97■■□□□ 1.91
PKD1-232ENST00000566905 HAP1P54257 671 aaPredicted RBP26.97■■□□□ 1.91
PKD1-232ENST00000566905 POLR3AO14802 1390 aaPredicted RBP26.97■■□□□ 1.91
PKD1-232ENST00000566905 CABLES1Q8TDN4 633 aa26.96■■□□□ 1.91
PKD1-232ENST00000566905 SBNO2Q9Y2G9 1366 aa26.95■■□□□ 1.9
PKD1-232ENST00000566905 CABP1Q9NZU7 370 aa26.94■■□□□ 1.9
PKD1-232ENST00000566905 ST20-MTHFSA0A0A6YYL1 179 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms