RNA–Protein interactions for RNA: ENST00000564890.1

PKD1-229, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-229ENST00000564890 CDC42BPGQ6DT37 1551 aa26.76■■□□□ 1.87
PKD1-229ENST00000564890 BRINP3Q76B58 766 aa26.76■■□□□ 1.87
PKD1-229ENST00000564890 POGKQ9P215 609 aa26.76■■□□□ 1.87
PKD1-229ENST00000564890 SAFB2Q14151 953 aaKnown RBP eCLIP26.75■■□□□ 1.87
PKD1-229ENST00000564890 TONSLQ96HA7 1378 aa26.74■■□□□ 1.87
PKD1-229ENST00000564890 NBPF1Q3BBV0 1214 aa26.74■■□□□ 1.87
PKD1-229ENST00000564890 C1orf167Q5SNV9 1468 aa26.74■■□□□ 1.87
PKD1-229ENST00000564890 PHLPP1O60346 1717 aa26.7■■□□□ 1.87
PKD1-229ENST00000564890 AHDC1Q5TGY3 1603 aaPredicted RBP26.68■■□□□ 1.86
PKD1-229ENST00000564890 ARHGEF28Q8N1W1 1705 aaKnown RBP26.68■■□□□ 1.86
PKD1-229ENST00000564890 TRPM1Q7Z4N2 1603 aa26.66■■□□□ 1.86
PKD1-229ENST00000564890 NUTM2FA1L443 756 aa26.66■■□□□ 1.86
PKD1-229ENST00000564890 ORAI2Q96SN7 254 aa26.66■■□□□ 1.86
PKD1-229ENST00000564890 NBPF8Q3BBV2 869 aa26.65■■□□□ 1.86
PKD1-229ENST00000564890 FMN2Q9NZ56 1722 aa26.65■■□□□ 1.86
PKD1-229ENST00000564890 MINK1Q8N4C8 1332 aaPredicted RBP26.65■■□□□ 1.86
PKD1-229ENST00000564890 COL16A1Q07092 1604 aaPredicted RBP26.64■■□□□ 1.85
PKD1-229ENST00000564890 HIRIP3Q9BW71 556 aaPredicted RBP26.63■■□□□ 1.85
PKD1-229ENST00000564890 CLSPNQ9HAW4 1339 aa26.63■■□□□ 1.85
PKD1-229ENST00000564890 ADGRB2O60241 1585 aa26.63■■□□□ 1.85
PKD1-229ENST00000564890 ROCK2O75116 1388 aaKnown RBP26.62■■□□□ 1.85
PKD1-229ENST00000564890 ESCO1Q5FWF5 840 aa26.62■■□□□ 1.85
PKD1-229ENST00000564890 DDX17Q92841 729 aaKnown RBP26.62■■□□□ 1.85
PKD1-229ENST00000564890 NHSL1Q5SYE7 1610 aa26.61■■□□□ 1.85
PKD1-229ENST00000564890 CCER1Q8TC90 406 aaPredicted RBP26.58■■□□□ 1.85
PKD1-229ENST00000564890 JCADQ9P266 1359 aa26.58■■□□□ 1.84
PKD1-229ENST00000564890 MED1Q15648 1581 aaPredicted RBP26.56■■□□□ 1.84
PKD1-229ENST00000564890 WASLO00401 505 aaPredicted RBP26.55■■□□□ 1.84
PKD1-229ENST00000564890 CENPJQ9HC77 1338 aaPredicted RBP26.54■■□□□ 1.84
PKD1-229ENST00000564890 GPRASP1Q5JY77 1395 aa26.54■■□□□ 1.84
PKD1-229ENST00000564890 DISP3Q9P2K9 1392 aa26.54■■□□□ 1.84
PKD1-229ENST00000564890 EIF3AQ14152 1382 aaKnown RBP26.53■■□□□ 1.84
PKD1-229ENST00000564890 ANKARQ7Z5J8 1434 aa26.53■■□□□ 1.84
PKD1-229ENST00000564890 RALGAPBQ86X10 1494 aa26.53■■□□□ 1.84
PKD1-229ENST00000564890 RGPD8O14715 1765 aaPredicted RBP26.51■■□□□ 1.83
PKD1-229ENST00000564890 NPHP3Q7Z494 1330 aa26.51■■□□□ 1.83
PKD1-229ENST00000564890 FOXO3O43524 673 aa26.51■■□□□ 1.83
PKD1-229ENST00000564890 LRRC59Q96AG4 307 aaKnown RBP26.51■■□□□ 1.83
PKD1-229ENST00000564890 USP32Q8NFA0 1604 aa26.5■■□□□ 1.83
PKD1-229ENST00000564890 TULP4Q9NRJ4 1543 aa26.5■■□□□ 1.83
PKD1-229ENST00000564890 SOS2Q07890 1332 aaPredicted RBP26.5■■□□□ 1.83
PKD1-229ENST00000564890 KIF1AQ12756 1690 aa26.5■■□□□ 1.83
PKD1-229ENST00000564890 CARD11Q9BXL7 1154 aa26.49■■□□□ 1.83
PKD1-229ENST00000564890 PHF8Q9UPP1 1060 aa26.49■■□□□ 1.83
PKD1-229ENST00000564890 SHPRHQ149N8 1683 aa26.48■■□□□ 1.83
PKD1-229ENST00000564890 PRR36Q9H6K5 1346 aa26.48■■□□□ 1.83
PKD1-229ENST00000564890 QRICH2Q9H0J4 1663 aa26.47■■□□□ 1.83
PKD1-229ENST00000564890 XPCQ01831 940 aaPredicted RBP26.47■■□□□ 1.83
PKD1-229ENST00000564890 CDK19Q9BWU1 502 aa26.47■■□□□ 1.83
PKD1-229ENST00000564890 TIMELESSQ9UNS1 1208 aa26.47■■□□□ 1.83
PKD1-229ENST00000564890 PXDNQ92626 1479 aa26.45■■□□□ 1.82
PKD1-229ENST00000564890 SPATA31A6Q5VVP1 1343 aa26.44■■□□□ 1.82
PKD1-229ENST00000564890 PMFBP1Q8TBY8 1022 aa26.43■■□□□ 1.82
PKD1-229ENST00000564890 PNPLA6Q8IY17 1366 aa26.43■■□□□ 1.82
PKD1-229ENST00000564890 ATP7BP35670 1465 aa26.42■■□□□ 1.82
PKD1-229ENST00000564890 NUDT16Q96DE0 195 aaKnown RBP26.42■■□□□ 1.82
PKD1-229ENST00000564890 PHF23Q9BUL5 403 aaPredicted RBP26.41■■□□□ 1.82
PKD1-229ENST00000564890 KRT28Q7Z3Y7 464 aa26.4■■□□□ 1.82
PKD1-229ENST00000564890 SRPK2P78362 688 aaKnown RBP26.39■■□□□ 1.82
PKD1-229ENST00000564890 NUTM2BA6NNL0 878 aaPredicted RBP26.38■■□□□ 1.81
PKD1-229ENST00000564890 NUTM2EB1AL46 878 aaPredicted RBP26.38■■□□□ 1.81
PKD1-229ENST00000564890 NUTM2AQ8IVF1 878 aaPredicted RBP26.38■■□□□ 1.81
PKD1-229ENST00000564890 LRP6O75581 1613 aa26.38■■□□□ 1.81
PKD1-229ENST00000564890 ITSN1Q15811 1721 aa26.37■■□□□ 1.81
PKD1-229ENST00000564890 PSME1Q06323 249 aa26.37■■□□□ 1.81
PKD1-229ENST00000564890 CABP2Q9NPB3 220 aa26.36■■□□□ 1.81
PKD1-229ENST00000564890 EVC2Q86UK5 1308 aa26.36■■□□□ 1.81
PKD1-229ENST00000564890 NGDNQ8NEJ9 315 aaKnown RBP26.35■■□□□ 1.81
PKD1-229ENST00000564890 CCDC61Q9Y6R9 512 aa26.35■■□□□ 1.81
PKD1-229ENST00000564890 MEX3CQ5U5Q3 659 aaKnown RBP26.34■■□□□ 1.81
PKD1-229ENST00000564890 TOPAZ1Q8N9V7 1692 aa26.34■■□□□ 1.81
PKD1-229ENST00000564890 SPATA31A3Q5VYP0 1347 aa26.34■■□□□ 1.81
PKD1-229ENST00000564890 SBNO1A3KN83 1393 aa26.32■■□□□ 1.8
PKD1-229ENST00000564890 SBNO2Q9Y2G9 1366 aa26.32■■□□□ 1.8
PKD1-229ENST00000564890 COL22A1Q8NFW1 1626 aaPredicted RBP26.31■■□□□ 1.8
PKD1-229ENST00000564890 TNS3Q68CZ2 1445 aa26.31■■□□□ 1.8
PKD1-229ENST00000564890 PPIP5K1Q6PFW1 1433 aa26.29■■□□□ 1.8
PKD1-229ENST00000564890 PLEKHG3A1L390 1219 aa26.28■■□□□ 1.8
PKD1-229ENST00000564890 RGS17Q9UGC6 210 aaPredicted RBP26.27■■□□□ 1.8
PKD1-229ENST00000564890 ACEP12821 1306 aa26.27■■□□□ 1.8
PKD1-229ENST00000564890 POLR3AO14802 1390 aaPredicted RBP26.27■■□□□ 1.8
PKD1-229ENST00000564890 ST20-MTHFSA0A0A6YYL1 179 aa26.26■■□□□ 1.79
PKD1-229ENST00000564890 LMOD2Q6P5Q4 547 aa26.26■■□□□ 1.79
PKD1-229ENST00000564890 TRPM3Q9HCF6 1732 aaPredicted RBP26.25■■□□□ 1.79
PKD1-229ENST00000564890 USP47Q96K76 1375 aa26.25■■□□□ 1.79
PKD1-229ENST00000564890 ARHGEF10O15013 1369 aa26.24■■□□□ 1.79
PKD1-229ENST00000564890 ADAMTS2O95450 1211 aa26.24■■□□□ 1.79
PKD1-229ENST00000564890 ILDR2Q71H61 639 aa26.23■■□□□ 1.79
PKD1-229ENST00000564890 CABP1Q9NZU7 370 aa26.23■■□□□ 1.79
PKD1-229ENST00000564890 PAK3O75914 559 aaPredicted RBP26.22■■□□□ 1.79
PKD1-229ENST00000564890 ATAD2Q6PL18 1390 aa26.21■■□□□ 1.79
PKD1-229ENST00000564890 TESK2Q96S53 571 aa26.21■■□□□ 1.79
PKD1-229ENST00000564890 PLEKHG5O94827 1062 aa26.2■■□□□ 1.78
PKD1-229ENST00000564890 C8orf37Q96NL8 207 aa26.2■■□□□ 1.78
PKD1-229ENST00000564890 ALS2Q96Q42 1657 aa26.19■■□□□ 1.78
PKD1-229ENST00000564890 CABLES1Q8TDN4 633 aa26.17■■□□□ 1.78
PKD1-229ENST00000564890 AFF2P51816 1311 aa26.16■■□□□ 1.78
PKD1-229ENST00000564890 HAP1P54257 671 aaPredicted RBP26.16■■□□□ 1.78
PKD1-229ENST00000564890 POTEAQ6S8J7 498 aa26.16■■□□□ 1.78
PKD1-229ENST00000564890 NGLY1Q96IV0 654 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms