RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 CDC42BPGQ6DT37 1551 aa25.95■■□□□ 1.74
CMTM3-204ENST00000562357 LRRC59Q96AG4 307 aaKnown RBP25.93■■□□□ 1.74
CMTM3-204ENST00000562357 SIRT1Q96EB6 747 aa25.93■■□□□ 1.74
CMTM3-204ENST00000562357 MEX3CQ5U5Q3 659 aaKnown RBP25.92■■□□□ 1.74
CMTM3-204ENST00000562357 NHSL1Q5SYE7 1610 aa25.92■■□□□ 1.74
CMTM3-204ENST00000562357 PLEKHH1Q9ULM0 1364 aa25.9■■□□□ 1.74
CMTM3-204ENST00000562357 ORAI2Q96SN7 254 aa25.89■■□□□ 1.74
CMTM3-204ENST00000562357 SHPRHQ149N8 1683 aa25.89■■□□□ 1.73
CMTM3-204ENST00000562357 ESCO1Q5FWF5 840 aa25.88■■□□□ 1.73
CMTM3-204ENST00000562357 DDX17Q92841 729 aaKnown RBP25.88■■□□□ 1.73
CMTM3-204ENST00000562357 POGKQ9P215 609 aa25.88■■□□□ 1.73
CMTM3-204ENST00000562357 PRAM1Q96QH2 718 aa25.86■■□□□ 1.73
CMTM3-204ENST00000562357 NUTM2FA1L443 756 aa25.84■■□□□ 1.73
CMTM3-204ENST00000562357 NUTM2BA6NNL0 878 aaPredicted RBP25.84■■□□□ 1.73
CMTM3-204ENST00000562357 NUTM2EB1AL46 878 aaPredicted RBP25.84■■□□□ 1.73
CMTM3-204ENST00000562357 NUTM2AQ8IVF1 878 aaPredicted RBP25.84■■□□□ 1.73
CMTM3-204ENST00000562357 RGS17Q9UGC6 210 aaPredicted RBP25.84■■□□□ 1.73
CMTM3-204ENST00000562357 NPHP3Q7Z494 1330 aa25.84■■□□□ 1.73
CMTM3-204ENST00000562357 DLC1Q96QB1 1528 aa25.83■■□□□ 1.73
CMTM3-204ENST00000562357 SAFB2Q14151 953 aaKnown RBP eCLIP25.83■■□□□ 1.73
CMTM3-204ENST00000562357 TRAK1Q9UPV9 953 aa25.82■■□□□ 1.72
CMTM3-204ENST00000562357 ADGRB1O14514 1584 aa25.82■■□□□ 1.72
CMTM3-204ENST00000562357 LRP6O75581 1613 aa25.81■■□□□ 1.72
CMTM3-204ENST00000562357 SOS2Q07890 1332 aaPredicted RBP25.81■■□□□ 1.72
CMTM3-204ENST00000562357 PNPLA6Q8IY17 1366 aa25.8■■□□□ 1.72
CMTM3-204ENST00000562357 ZNF772Q68DY9 489 aaPredicted RBP25.77■■□□□ 1.72
CMTM3-204ENST00000562357 FMN2Q9NZ56 1722 aa25.77■■□□□ 1.72
CMTM3-204ENST00000562357 FOXO3O43524 673 aa25.76■■□□□ 1.71
CMTM3-204ENST00000562357 POTEAQ6S8J7 498 aa25.75■■□□□ 1.71
CMTM3-204ENST00000562357 EIF3AQ14152 1382 aaKnown RBP25.73■■□□□ 1.71
CMTM3-204ENST00000562357 KIF1AQ12756 1690 aa25.72■■□□□ 1.71
CMTM3-204ENST00000562357 MINK1Q8N4C8 1332 aaPredicted RBP25.71■■□□□ 1.71
CMTM3-204ENST00000562357 XPCQ01831 940 aaPredicted RBP25.71■■□□□ 1.71
CMTM3-204ENST00000562357 TRIM26Q12899 539 aaPredicted RBP25.71■■□□□ 1.71
CMTM3-204ENST00000562357 PHF8Q9UPP1 1060 aa25.7■■□□□ 1.7
CMTM3-204ENST00000562357 ANKARQ7Z5J8 1434 aa25.7■■□□□ 1.7
CMTM3-204ENST00000562357 ADGRB2O60241 1585 aa25.69■■□□□ 1.7
CMTM3-204ENST00000562357 PXDNQ92626 1479 aa25.69■■□□□ 1.7
CMTM3-204ENST00000562357 HIRIP3Q9BW71 556 aaPredicted RBP25.69■■□□□ 1.7
CMTM3-204ENST00000562357 C8orf37Q96NL8 207 aa25.68■■□□□ 1.7
CMTM3-204ENST00000562357 ADAMTS2O95450 1211 aa25.67■■□□□ 1.7
CMTM3-204ENST00000562357 NEUROD1Q13562 356 aa25.67■■□□□ 1.7
CMTM3-204ENST00000562357 AFF2P51816 1311 aa25.66■■□□□ 1.7
CMTM3-204ENST00000562357 KIAA1210Q9ULL0 1709 aa25.66■■□□□ 1.7
CMTM3-204ENST00000562357 PSME1Q06323 249 aa25.66■■□□□ 1.7
CMTM3-204ENST00000562357 KRT28Q7Z3Y7 464 aa25.65■■□□□ 1.7
CMTM3-204ENST00000562357 L3MBTL2Q969R5 705 aa25.65■■□□□ 1.7
CMTM3-204ENST00000562357 SIN3AQ96ST3 1273 aa25.65■■□□□ 1.7
CMTM3-204ENST00000562357 WASLO00401 505 aaPredicted RBP25.64■■□□□ 1.7
CMTM3-204ENST00000562357 NGLY1Q96IV0 654 aa25.64■■□□□ 1.7
CMTM3-204ENST00000562357 ARHGEF28Q8N1W1 1705 aaKnown RBP25.62■■□□□ 1.69
CMTM3-204ENST00000562357 COL22A1Q8NFW1 1626 aaPredicted RBP25.62■■□□□ 1.69
CMTM3-204ENST00000562357 TULP4Q9NRJ4 1543 aa25.61■■□□□ 1.69
CMTM3-204ENST00000562357 SPATA31A3Q5VYP0 1347 aa25.61■■□□□ 1.69
CMTM3-204ENST00000562357 NBPF1Q3BBV0 1214 aa25.6■■□□□ 1.69
CMTM3-204ENST00000562357 RXRBP28702 533 aa25.59■■□□□ 1.69
CMTM3-204ENST00000562357 PMFBP1Q8TBY8 1022 aa25.59■■□□□ 1.69
CMTM3-204ENST00000562357 GPRASP1Q5JY77 1395 aa25.57■■□□□ 1.68
CMTM3-204ENST00000562357 RGPD8O14715 1765 aaPredicted RBP25.57■■□□□ 1.68
CMTM3-204ENST00000562357 HAP1P54257 671 aaPredicted RBP25.57■■□□□ 1.68
CMTM3-204ENST00000562357 SBNO1A3KN83 1393 aa25.56■■□□□ 1.68
CMTM3-204ENST00000562357 TNS3Q68CZ2 1445 aa25.56■■□□□ 1.68
CMTM3-204ENST00000562357 LMOD2Q6P5Q4 547 aa25.56■■□□□ 1.68
CMTM3-204ENST00000562357 USP32Q8NFA0 1604 aa25.55■■□□□ 1.68
CMTM3-204ENST00000562357 ARHGEF10O15013 1369 aa25.55■■□□□ 1.68
CMTM3-204ENST00000562357 NGDNQ8NEJ9 315 aaKnown RBP25.54■■□□□ 1.68
CMTM3-204ENST00000562357 PRR36Q9H6K5 1346 aa25.54■■□□□ 1.68
CMTM3-204ENST00000562357 QTRT2Q9H974 415 aaKnown RBP25.53■■□□□ 1.68
CMTM3-204ENST00000562357 USP21Q9UK80 565 aa25.53■■□□□ 1.68
CMTM3-204ENST00000562357 CENPJQ9HC77 1338 aaPredicted RBP25.53■■□□□ 1.68
CMTM3-204ENST00000562357 CDK19Q9BWU1 502 aa25.52■■□□□ 1.68
CMTM3-204ENST00000562357 NUDT16Q96DE0 195 aaKnown RBP25.51■■□□□ 1.67
CMTM3-204ENST00000562357 ROCK2O75116 1388 aaKnown RBP25.5■■□□□ 1.67
CMTM3-204ENST00000562357 RBM6P78332 1123 aaKnown RBP25.5■■□□□ 1.67
CMTM3-204ENST00000562357 FNBP4Q8N3X1 1017 aaPredicted RBP25.5■■□□□ 1.67
CMTM3-204ENST00000562357 TONSLQ96HA7 1378 aa25.5■■□□□ 1.67
CMTM3-204ENST00000562357 CDK12Q9NYV4 1490 aaPredicted RBP25.49■■□□□ 1.67
CMTM3-204ENST00000562357 TRPC5Q9UL62 973 aaPredicted RBP25.49■■□□□ 1.67
CMTM3-204ENST00000562357 ATP7BP35670 1465 aa25.48■■□□□ 1.67
CMTM3-204ENST00000562357 ITSN1Q15811 1721 aa25.48■■□□□ 1.67
CMTM3-204ENST00000562357 PLEKHG5O94827 1062 aa25.47■■□□□ 1.67
CMTM3-204ENST00000562357 SRPK2P78362 688 aaKnown RBP25.47■■□□□ 1.67
CMTM3-204ENST00000562357 CCDC61Q9Y6R9 512 aa25.46■■□□□ 1.67
CMTM3-204ENST00000562357 TRPM1Q7Z4N2 1603 aa25.45■■□□□ 1.67
CMTM3-204ENST00000562357 PAK3O75914 559 aaPredicted RBP25.45■■□□□ 1.66
CMTM3-204ENST00000562357 CABLES1Q8TDN4 633 aa25.43■■□□□ 1.66
CMTM3-204ENST00000562357 MARF1Q9Y4F3 1742 aaKnown RBP25.42■■□□□ 1.66
CMTM3-204ENST00000562357 QRICH2Q9H0J4 1663 aa25.4■■□□□ 1.66
CMTM3-204ENST00000562357 ATRNO75882 1429 aa25.39■■□□□ 1.66
CMTM3-204ENST00000562357 TRPM3Q9HCF6 1732 aaPredicted RBP25.39■■□□□ 1.65
CMTM3-204ENST00000562357 EVC2Q86UK5 1308 aa25.38■■□□□ 1.65
CMTM3-204ENST00000562357 ACEP12821 1306 aa25.37■■□□□ 1.65
CMTM3-204ENST00000562357 RGS12O14924 1447 aa25.37■■□□□ 1.65
CMTM3-204ENST00000562357 BCL9LQ86UU0 1499 aa25.37■■□□□ 1.65
CMTM3-204ENST00000562357 PLEKHG3A1L390 1219 aa25.37■■□□□ 1.65
CMTM3-204ENST00000562357 NBPF8Q3BBV2 869 aa25.37■■□□□ 1.65
CMTM3-204ENST00000562357 UNC5CLQ8IV45 518 aa25.37■■□□□ 1.65
CMTM3-204ENST00000562357 CABP2Q9NPB3 220 aa25.37■■□□□ 1.65
CMTM3-204ENST00000562357 POLR3AO14802 1390 aaPredicted RBP25.36■■□□□ 1.65
CMTM3-204ENST00000562357 CARD11Q9BXL7 1154 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms