RNA–Protein interactions for RNA: ENST00000561660.1

FANCA-206, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-206ENST00000561660 KNDC1Q76NI1 1749 aa26.3■■□□□ 1.8
FANCA-206ENST00000561660 STAC3Q96MF2 364 aa26.27■■□□□ 1.8
FANCA-206ENST00000561660 ADGRB1O14514 1584 aa26.27■■□□□ 1.8
FANCA-206ENST00000561660 CDC42BPGQ6DT37 1551 aa26.27■■□□□ 1.8
FANCA-206ENST00000561660 LAMC1P11047 1609 aa26.27■■□□□ 1.8
FANCA-206ENST00000561660 NHSL1Q5SYE7 1610 aa26.27■■□□□ 1.8
FANCA-206ENST00000561660 SOCS7O14512 581 aa26.25■■□□□ 1.79
FANCA-206ENST00000561660 SPATA31A6Q5VVP1 1343 aa26.23■■□□□ 1.79
FANCA-206ENST00000561660 PRAM1Q96QH2 718 aa26.23■■□□□ 1.79
FANCA-206ENST00000561660 LRP6O75581 1613 aa26.23■■□□□ 1.79
FANCA-206ENST00000561660 NUTM2FA1L443 756 aa26.21■■□□□ 1.79
FANCA-206ENST00000561660 LRRC59Q96AG4 307 aaKnown RBP26.21■■□□□ 1.79
FANCA-206ENST00000561660 SHPRHQ149N8 1683 aa26.2■■□□□ 1.78
FANCA-206ENST00000561660 SAFB2Q14151 953 aaKnown RBP eCLIP26.2■■□□□ 1.78
FANCA-206ENST00000561660 ESCO1Q5FWF5 840 aa26.2■■□□□ 1.78
FANCA-206ENST00000561660 DLC1Q96QB1 1528 aa26.19■■□□□ 1.78
FANCA-206ENST00000561660 SOS2Q07890 1332 aaPredicted RBP26.19■■□□□ 1.78
FANCA-206ENST00000561660 TRAK1Q9UPV9 953 aa26.19■■□□□ 1.78
FANCA-206ENST00000561660 POTEAQ6S8J7 498 aa26.17■■□□□ 1.78
FANCA-206ENST00000561660 SIN3AQ96ST3 1273 aa26.16■■□□□ 1.78
FANCA-206ENST00000561660 PNPLA6Q8IY17 1366 aa26.16■■□□□ 1.78
FANCA-206ENST00000561660 POGKQ9P215 609 aa26.15■■□□□ 1.78
FANCA-206ENST00000561660 NUTM2BA6NNL0 878 aaPredicted RBP26.14■■□□□ 1.78
FANCA-206ENST00000561660 NUTM2EB1AL46 878 aaPredicted RBP26.14■■□□□ 1.78
FANCA-206ENST00000561660 NUTM2AQ8IVF1 878 aaPredicted RBP26.14■■□□□ 1.78
FANCA-206ENST00000561660 FMN2Q9NZ56 1722 aa26.13■■□□□ 1.77
FANCA-206ENST00000561660 FOXO3O43524 673 aa26.12■■□□□ 1.77
FANCA-206ENST00000561660 TRIM26Q12899 539 aaPredicted RBP26.11■■□□□ 1.77
FANCA-206ENST00000561660 NPHP3Q7Z494 1330 aa26.11■■□□□ 1.77
FANCA-206ENST00000561660 L3MBTL2Q969R5 705 aa26.1■■□□□ 1.77
FANCA-206ENST00000561660 PXDNQ92626 1479 aa26.1■■□□□ 1.77
FANCA-206ENST00000561660 XPCQ01831 940 aaPredicted RBP26.09■■□□□ 1.77
FANCA-206ENST00000561660 NBPF1Q3BBV0 1214 aa26.09■■□□□ 1.77
FANCA-206ENST00000561660 MEX3CQ5U5Q3 659 aaKnown RBP26.09■■□□□ 1.77
FANCA-206ENST00000561660 HIRIP3Q9BW71 556 aaPredicted RBP26.09■■□□□ 1.77
FANCA-206ENST00000561660 MINK1Q8N4C8 1332 aaPredicted RBP26.07■■□□□ 1.76
FANCA-206ENST00000561660 NEUROD1Q13562 356 aa26.06■■□□□ 1.76
FANCA-206ENST00000561660 ADGRB2O60241 1585 aa26.04■■□□□ 1.76
FANCA-206ENST00000561660 PHF8Q9UPP1 1060 aa26.03■■□□□ 1.76
FANCA-206ENST00000561660 WASLO00401 505 aaPredicted RBP26.01■■□□□ 1.75
FANCA-206ENST00000561660 PRR36Q9H6K5 1346 aa26.01■■□□□ 1.75
FANCA-206ENST00000561660 KIAA1210Q9ULL0 1709 aa26.01■■□□□ 1.75
FANCA-206ENST00000561660 USP32Q8NFA0 1604 aa26■■□□□ 1.75
FANCA-206ENST00000561660 ANKARQ7Z5J8 1434 aa26■■□□□ 1.75
FANCA-206ENST00000561660 RGPD8O14715 1765 aaPredicted RBP26■■□□□ 1.75
FANCA-206ENST00000561660 ARHGEF28Q8N1W1 1705 aaKnown RBP26■■□□□ 1.75
FANCA-206ENST00000561660 KRT28Q7Z3Y7 464 aa25.99■■□□□ 1.75
FANCA-206ENST00000561660 ADAMTS2O95450 1211 aa25.98■■□□□ 1.75
FANCA-206ENST00000561660 ZNF772Q68DY9 489 aaPredicted RBP25.98■■□□□ 1.75
FANCA-206ENST00000561660 KIF1AQ12756 1690 aa25.98■■□□□ 1.75
FANCA-206ENST00000561660 AFF2P51816 1311 aa25.97■■□□□ 1.75
FANCA-206ENST00000561660 PMFBP1Q8TBY8 1022 aa25.97■■□□□ 1.75
FANCA-206ENST00000561660 C8orf37Q96NL8 207 aa25.97■■□□□ 1.75
FANCA-206ENST00000561660 COL22A1Q8NFW1 1626 aaPredicted RBP25.96■■□□□ 1.75
FANCA-206ENST00000561660 SPATA31A3Q5VYP0 1347 aa25.96■■□□□ 1.75
FANCA-206ENST00000561660 TULP4Q9NRJ4 1543 aa25.94■■□□□ 1.74
FANCA-206ENST00000561660 EIF3AQ14152 1382 aaKnown RBP25.91■■□□□ 1.74
FANCA-206ENST00000561660 PSME1Q06323 249 aa25.9■■□□□ 1.74
FANCA-206ENST00000561660 NBPF8Q3BBV2 869 aa25.9■■□□□ 1.74
FANCA-206ENST00000561660 NGLY1Q96IV0 654 aa25.9■■□□□ 1.74
FANCA-206ENST00000561660 CDK19Q9BWU1 502 aa25.9■■□□□ 1.74
FANCA-206ENST00000561660 NUDT16Q96DE0 195 aaKnown RBP25.89■■□□□ 1.74
FANCA-206ENST00000561660 SBNO1A3KN83 1393 aa25.89■■□□□ 1.74
FANCA-206ENST00000561660 TNS3Q68CZ2 1445 aa25.88■■□□□ 1.73
FANCA-206ENST00000561660 ATP7BP35670 1465 aa25.87■■□□□ 1.73
FANCA-206ENST00000561660 FNBP4Q8N3X1 1017 aaPredicted RBP25.86■■□□□ 1.73
FANCA-206ENST00000561660 CENPJQ9HC77 1338 aaPredicted RBP25.86■■□□□ 1.73
FANCA-206ENST00000561660 TRPM1Q7Z4N2 1603 aa25.85■■□□□ 1.73
FANCA-206ENST00000561660 RXRBP28702 533 aa25.85■■□□□ 1.73
FANCA-206ENST00000561660 QTRT2Q9H974 415 aaKnown RBP25.85■■□□□ 1.73
FANCA-206ENST00000561660 CABLES1Q8TDN4 633 aa25.83■■□□□ 1.73
FANCA-206ENST00000561660 NGDNQ8NEJ9 315 aaKnown RBP25.82■■□□□ 1.72
FANCA-206ENST00000561660 ROCK2O75116 1388 aaKnown RBP25.82■■□□□ 1.72
FANCA-206ENST00000561660 USP21Q9UK80 565 aa25.81■■□□□ 1.72
FANCA-206ENST00000561660 LMOD2Q6P5Q4 547 aa25.8■■□□□ 1.72
FANCA-206ENST00000561660 GPRASP1Q5JY77 1395 aa25.8■■□□□ 1.72
FANCA-206ENST00000561660 PLEKHG5O94827 1062 aa25.79■■□□□ 1.72
FANCA-206ENST00000561660 CCDC61Q9Y6R9 512 aa25.79■■□□□ 1.72
FANCA-206ENST00000561660 TRPM3Q9HCF6 1732 aaPredicted RBP25.79■■□□□ 1.72
FANCA-206ENST00000561660 ARHGEF10O15013 1369 aa25.79■■□□□ 1.72
FANCA-206ENST00000561660 TONSLQ96HA7 1378 aa25.78■■□□□ 1.72
FANCA-206ENST00000561660 BCL9LQ86UU0 1499 aa25.78■■□□□ 1.72
FANCA-206ENST00000561660 PLEKHG3A1L390 1219 aa25.77■■□□□ 1.72
FANCA-206ENST00000561660 RBM6P78332 1123 aaKnown RBP25.77■■□□□ 1.72
FANCA-206ENST00000561660 CABP2Q9NPB3 220 aa25.77■■□□□ 1.72
FANCA-206ENST00000561660 CDK12Q9NYV4 1490 aaPredicted RBP25.75■■□□□ 1.71
FANCA-206ENST00000561660 ATRNO75882 1429 aa25.75■■□□□ 1.71
FANCA-206ENST00000561660 POLR3AO14802 1390 aaPredicted RBP25.75■■□□□ 1.71
FANCA-206ENST00000561660 ACEP12821 1306 aa25.75■■□□□ 1.71
FANCA-206ENST00000561660 SRPK2P78362 688 aaKnown RBP25.75■■□□□ 1.71
FANCA-206ENST00000561660 TRPC5Q9UL62 973 aaPredicted RBP25.74■■□□□ 1.71
FANCA-206ENST00000561660 TOPAZ1Q8N9V7 1692 aa25.74■■□□□ 1.71
FANCA-206ENST00000561660 QRICH2Q9H0J4 1663 aa25.74■■□□□ 1.71
FANCA-206ENST00000561660 MARF1Q9Y4F3 1742 aaKnown RBP25.73■■□□□ 1.71
FANCA-206ENST00000561660 ALS2Q96Q42 1657 aa25.73■■□□□ 1.71
FANCA-206ENST00000561660 SLIT2O94813 1529 aa25.73■■□□□ 1.71
FANCA-206ENST00000561660 ITSN1Q15811 1721 aa25.72■■□□□ 1.71
FANCA-206ENST00000561660 PAK3O75914 559 aaPredicted RBP25.72■■□□□ 1.71
FANCA-206ENST00000561660 RGS12O14924 1447 aa25.71■■□□□ 1.71
FANCA-206ENST00000561660 HAP1P54257 671 aaPredicted RBP25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms