RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 PRAM1Q96QH2 718 aa14.57□□□□□ -0.08
LRRC28-221ENST00000561276 TMEM94Q12767 1356 aa14.57□□□□□ -0.08
LRRC28-221ENST00000561276 DLC1Q96QB1 1528 aa14.56□□□□□ -0.08
LRRC28-221ENST00000561276 ZEB1P37275 1124 aaPredicted RBP14.56□□□□□ -0.08
LRRC28-221ENST00000561276 SAFB2Q14151 953 aaKnown RBP eCLIP14.56□□□□□ -0.08
LRRC28-221ENST00000561276 C14orf37Q86TY3 774 aa14.56□□□□□ -0.08
LRRC28-221ENST00000561276 PLEKHH1Q9ULM0 1364 aa14.56□□□□□ -0.08
LRRC28-221ENST00000561276 PTCH1Q13635 1447 aa14.56□□□□□ -0.08
LRRC28-221ENST00000561276 FAM135BQ49AJ0 1406 aa14.56□□□□□ -0.08
LRRC28-221ENST00000561276 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.55□□□□□ -0.08
LRRC28-221ENST00000561276 NCOA3Q9Y6Q9 1424 aa14.55□□□□□ -0.08
LRRC28-221ENST00000561276 NALCNQ8IZF0 1738 aa14.54□□□□□ -0.08
LRRC28-221ENST00000561276 RNF39Q9H2S5 420 aa14.53□□□□□ -0.08
LRRC28-221ENST00000561276 C19orf44Q9H6X5 657 aa14.53□□□□□ -0.08
LRRC28-221ENST00000561276 QRICH2Q9H0J4 1663 aa14.52□□□□□ -0.09
LRRC28-221ENST00000561276 MINK1Q8N4C8 1332 aaPredicted RBP14.51□□□□□ -0.09
LRRC28-221ENST00000561276 CENPJQ9HC77 1338 aaPredicted RBP14.51□□□□□ -0.09
LRRC28-221ENST00000561276 MSH6P52701 1360 aa14.5□□□□□ -0.09
LRRC28-221ENST00000561276 EIF3AQ14152 1382 aaKnown RBP14.5□□□□□ -0.09
LRRC28-221ENST00000561276 ST20-MTHFSA0A0A6YYL1 179 aa14.5□□□□□ -0.09
LRRC28-221ENST00000561276 HIRIP3Q9BW71 556 aaPredicted RBP14.5□□□□□ -0.09
LRRC28-221ENST00000561276 IQSEC2Q5JU85 1478 aa14.5□□□□□ -0.09
LRRC28-221ENST00000561276 ADGRL3Q9HAR2 1447 aa14.49□□□□□ -0.09
LRRC28-221ENST00000561276 ATF3P18847 181 aa14.49□□□□□ -0.09
LRRC28-221ENST00000561276 USP47Q96K76 1375 aa14.48□□□□□ -0.09
LRRC28-221ENST00000561276 EIF4G2P78344 907 aaKnown RBP eCLIP14.48□□□□□ -0.09
LRRC28-221ENST00000561276 RGPD8O14715 1765 aaPredicted RBP14.47□□□□□ -0.09
LRRC28-221ENST00000561276 CADPS2Q86UW7 1296 aa14.47□□□□□ -0.09
LRRC28-221ENST00000561276 TOM1O60784 492 aa14.46□□□□□ -0.09
LRRC28-221ENST00000561276 HSPA5P11021 654 aaKnown RBP14.46□□□□□ -0.09
LRRC28-221ENST00000561276 UBAP1LF5GYI3 381 aa14.45□□□□□ -0.1
LRRC28-221ENST00000561276 WASLO00401 505 aaPredicted RBP14.45□□□□□ -0.1
LRRC28-221ENST00000561276 SLAIN2Q9P270 581 aa14.45□□□□□ -0.1
LRRC28-221ENST00000561276 FMN2Q9NZ56 1722 aa14.44□□□□□ -0.1
LRRC28-221ENST00000561276 ADGRB2O60241 1585 aa14.44□□□□□ -0.1
LRRC28-221ENST00000561276 DCCP43146 1447 aa14.44□□□□□ -0.1
LRRC28-221ENST00000561276 NUTM2FA1L443 756 aa14.44□□□□□ -0.1
LRRC28-221ENST00000561276 NCBP3Q53F19 620 aaKnown RBP14.44□□□□□ -0.1
LRRC28-221ENST00000561276 TESK2Q96S53 571 aa14.44□□□□□ -0.1
LRRC28-221ENST00000561276 CDK19Q9BWU1 502 aa14.44□□□□□ -0.1
LRRC28-221ENST00000561276 CDC42BPGQ6DT37 1551 aa14.43□□□□□ -0.1
LRRC28-221ENST00000561276 EVC2Q86UK5 1308 aa14.42□□□□□ -0.1
LRRC28-221ENST00000561276 SLC24A1O60721 1099 aa14.42□□□□□ -0.1
LRRC28-221ENST00000561276 SBNO2Q9Y2G9 1366 aa14.42□□□□□ -0.1
LRRC28-221ENST00000561276 SRPK2P78362 688 aaKnown RBP14.41□□□□□ -0.1
LRRC28-221ENST00000561276 MST1RQ04912 1400 aa14.41□□□□□ -0.1
LRRC28-221ENST00000561276 PIP4K2BP78356 416 aa14.4□□□□□ -0.1
LRRC28-221ENST00000561276 CABP2Q9NPB3 220 aa14.4□□□□□ -0.1
LRRC28-221ENST00000561276 USP32Q8NFA0 1604 aa14.4□□□□□ -0.1
LRRC28-221ENST00000561276 TULP4Q9NRJ4 1543 aa14.4□□□□□ -0.1
LRRC28-221ENST00000561276 TMF1P82094 1093 aa14.39□□□□□ -0.11
LRRC28-221ENST00000561276 NUDT16Q96DE0 195 aaKnown RBP14.39□□□□□ -0.11
LRRC28-221ENST00000561276 ORAI2Q96SN7 254 aa14.39□□□□□ -0.11
LRRC28-221ENST00000561276 C1orf167Q5SNV9 1468 aa14.38□□□□□ -0.11
LRRC28-221ENST00000561276 ESCO1Q5FWF5 840 aa14.38□□□□□ -0.11
LRRC28-221ENST00000561276 PRR36Q9H6K5 1346 aa14.38□□□□□ -0.11
LRRC28-221ENST00000561276 ROBO1Q9Y6N7 1651 aa14.37□□□□□ -0.11
LRRC28-221ENST00000561276 ITSN1Q15811 1721 aa14.37□□□□□ -0.11
LRRC28-221ENST00000561276 DISP3Q9P2K9 1392 aa14.36□□□□□ -0.11
LRRC28-221ENST00000561276 CCDC61Q9Y6R9 512 aa14.36□□□□□ -0.11
LRRC28-221ENST00000561276 ANKARQ7Z5J8 1434 aa14.35□□□□□ -0.11
LRRC28-221ENST00000561276 BRINP3Q76B58 766 aa14.35□□□□□ -0.11
LRRC28-221ENST00000561276 PUS7Q96PZ0 661 aaKnown RBP14.35□□□□□ -0.11
LRRC28-221ENST00000561276 ATP7BP35670 1465 aa14.34□□□□□ -0.11
LRRC28-221ENST00000561276 C11orf95C9JLR9 678 aaPredicted RBP14.34□□□□□ -0.11
LRRC28-221ENST00000561276 CDCA8Q53HL2 280 aa14.34□□□□□ -0.11
LRRC28-221ENST00000561276 PMFBP1Q8TBY8 1022 aa14.34□□□□□ -0.11
LRRC28-221ENST00000561276 FBXO41Q8TF61 875 aa14.34□□□□□ -0.11
LRRC28-221ENST00000561276 PHF8Q9UPP1 1060 aa14.34□□□□□ -0.11
LRRC28-221ENST00000561276 TOPAZ1Q8N9V7 1692 aa14.33□□□□□ -0.11
LRRC28-221ENST00000561276 CABP1Q9NZU7 370 aa14.33□□□□□ -0.12
LRRC28-221ENST00000561276 FOXO3O43524 673 aa14.32□□□□□ -0.12
LRRC28-221ENST00000561276 C1QBPQ07021 282 aaKnown RBP14.32□□□□□ -0.12
LRRC28-221ENST00000561276 KIF1AQ12756 1690 aa14.32□□□□□ -0.12
LRRC28-221ENST00000561276 PPIP5K1Q6PFW1 1433 aa14.32□□□□□ -0.12
LRRC28-221ENST00000561276 PLEKHG3A1L390 1219 aa14.31□□□□□ -0.12
LRRC28-221ENST00000561276 TMC1Q8TDI8 760 aa14.31□□□□□ -0.12
LRRC28-221ENST00000561276 DDX17Q92841 729 aaKnown RBP14.31□□□□□ -0.12
LRRC28-221ENST00000561276 POLR3GLQ9BT43 218 aa14.31□□□□□ -0.12
LRRC28-221ENST00000561276 ATAD2Q6PL18 1390 aa14.31□□□□□ -0.12
LRRC28-221ENST00000561276 NGDNQ8NEJ9 315 aaKnown RBP14.3□□□□□ -0.12
LRRC28-221ENST00000561276 SLC12A5Q9H2X9 1139 aa14.3□□□□□ -0.12
LRRC28-221ENST00000561276 ACEP12821 1306 aa14.3□□□□□ -0.12
LRRC28-221ENST00000561276 NHSL1Q5SYE7 1610 aa14.3□□□□□ -0.12
LRRC28-221ENST00000561276 PSME1Q06323 249 aa14.29□□□□□ -0.12
LRRC28-221ENST00000561276 PHLPP1O60346 1717 aa14.29□□□□□ -0.12
LRRC28-221ENST00000561276 NPM3O75607 178 aaKnown RBP14.28□□□□□ -0.12
LRRC28-221ENST00000561276 AKAP12Q02952 1782 aa14.27□□□□□ -0.12
LRRC28-221ENST00000561276 KIF7Q2M1P5 1343 aa14.27□□□□□ -0.12
LRRC28-221ENST00000561276 NPHP3Q7Z494 1330 aa14.27□□□□□ -0.12
LRRC28-221ENST00000561276 XPCQ01831 940 aaPredicted RBP14.27□□□□□ -0.13
LRRC28-221ENST00000561276 KRT28Q7Z3Y7 464 aa14.27□□□□□ -0.13
LRRC28-221ENST00000561276 MYOM1P52179 1685 aa14.26□□□□□ -0.13
LRRC28-221ENST00000561276 POLR3AO14802 1390 aaPredicted RBP14.26□□□□□ -0.13
LRRC28-221ENST00000561276 ZNF692Q9BU19 519 aaPredicted RBP14.26□□□□□ -0.13
LRRC28-221ENST00000561276 AHDC1Q5TGY3 1603 aaPredicted RBP14.26□□□□□ -0.13
LRRC28-221ENST00000561276 WASHC2AQ641Q2 1341 aa14.25□□□□□ -0.13
LRRC28-221ENST00000561276 HSPA1LP34931 641 aa14.25□□□□□ -0.13
LRRC28-221ENST00000561276 TERF2IPQ9NYB0 399 aa14.25□□□□□ -0.13
LRRC28-221ENST00000561276 SOS2Q07890 1332 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms