RNA–Protein interactions for RNA: ENST00000560676.5

AKAP13-222, Transcript of A-kinase anchoring protein 13, human

APPRIS ALT2 TSL 1 (best)

Gene AKAP13, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AKAP13-222	ENST00000560676	PHF23	Q9BUL5	403 aa	Predicted RBP	10.9	□□□□□ -0.66
AKAP13-222	ENST00000560676	ABCA6	Q8N139	1617 aa		10.9	□□□□□ -0.66
AKAP13-222	ENST00000560676	VIRMA	Q69YN4	1812 aa	Known RBP	10.9	□□□□□ -0.66
AKAP13-222	ENST00000560676	CCDC27	Q2M243	656 aa		10.9	□□□□□ -0.67
AKAP13-222	ENST00000560676	NCBP3	Q53F19	620 aa	Known RBP	10.9	□□□□□ -0.67
AKAP13-222	ENST00000560676	TCP11L2	Q8N4U5	519 aa		10.9	□□□□□ -0.67
AKAP13-222	ENST00000560676	RWDD1	Q9H446	243 aa	Predicted RBP	10.9	□□□□□ -0.67
AKAP13-222	ENST00000560676	NSD3	Q9BZ95	1437 aa		10.9	□□□□□ -0.67
AKAP13-222	ENST00000560676	NEUROD2	Q15784	382 aa		10.89	□□□□□ -0.67
AKAP13-222	ENST00000560676	FAM43A	Q8N2R8	423 aa		10.89	□□□□□ -0.67
AKAP13-222	ENST00000560676	EIF5B	O60841	1220 aa	Known RBP	10.89	□□□□□ -0.67
AKAP13-222	ENST00000560676	CFAP53	Q96M91	514 aa		10.89	□□□□□ -0.67
AKAP13-222	ENST00000560676	ATP7A	Q04656	1500 aa		10.89	□□□□□ -0.67
AKAP13-222	ENST00000560676	NLRP1	Q9C000	1473 aa		10.89	□□□□□ -0.67
AKAP13-222	ENST00000560676	NRXN1	Q9ULB1	1477 aa		10.89	□□□□□ -0.67
AKAP13-222	ENST00000560676	UBE2Q2	Q8WVN8	375 aa		10.89	□□□□□ -0.67
AKAP13-222	ENST00000560676	TBC1D32	Q96NH3	1257 aa		10.89	□□□□□ -0.67
AKAP13-222	ENST00000560676	MYO3A	Q8NEV4	1616 aa		10.88	□□□□□ -0.67
AKAP13-222	ENST00000560676	MYH16	Q9H6N6	1097 aa		10.88	□□□□□ -0.67
AKAP13-222	ENST00000560676	PCDHB15	Q9Y5E8	787 aa		10.88	□□□□□ -0.67
AKAP13-222	ENST00000560676	SLK	Q9H2G2	1235 aa	Predicted RBP	10.88	□□□□□ -0.67
AKAP13-222	ENST00000560676	RRP7A	Q9Y3A4	280 aa	Known RBP	10.88	□□□□□ -0.67
AKAP13-222	ENST00000560676	IQSEC2	Q5JU85	1478 aa		10.88	□□□□□ -0.67
AKAP13-222	ENST00000560676	L1TD1	Q5T7N2	865 aa	Known RBP	10.87	□□□□□ -0.67
AKAP13-222	ENST00000560676	PDZRN3	Q9UPQ7	1066 aa		10.87	□□□□□ -0.67
AKAP13-222	ENST00000560676	INO80	Q9ULG1	1556 aa	Predicted RBP	10.87	□□□□□ -0.67
AKAP13-222	ENST00000560676	ANTXR1	Q9H6X2	564 aa		10.87	□□□□□ -0.67
AKAP13-222	ENST00000560676	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.87	□□□□□ -0.67
AKAP13-222	ENST00000560676	RLBP1	P12271	317 aa		10.86	□□□□□ -0.67
AKAP13-222	ENST00000560676	TNNT2	P45379	298 aa	Predicted RBP	10.86	□□□□□ -0.67
AKAP13-222	ENST00000560676	POGK	Q9P215	609 aa		10.86	□□□□□ -0.67
AKAP13-222	ENST00000560676	SETBP1	Q9Y6X0	1596 aa		10.86	□□□□□ -0.67
AKAP13-222	ENST00000560676	UGGT1	Q9NYU2	1555 aa		10.86	□□□□□ -0.67
AKAP13-222	ENST00000560676	CT47B1	P0C2W7	299 aa	Predicted RBP	10.85	□□□□□ -0.67
AKAP13-222	ENST00000560676	SLC12A5	Q9H2X9	1139 aa		10.85	□□□□□ -0.67
AKAP13-222	ENST00000560676	FANCA	O15360	1455 aa		10.85	□□□□□ -0.67
AKAP13-222	ENST00000560676	MTHFS	P49914	203 aa		10.85	□□□□□ -0.67
AKAP13-222	ENST00000560676	ZNF518A	Q6AHZ1	1483 aa		10.85	□□□□□ -0.67
AKAP13-222	ENST00000560676	SHPRH	Q149N8	1683 aa		10.85	□□□□□ -0.67
AKAP13-222	ENST00000560676	EFCAB6	Q5THR3	1501 aa		10.85	□□□□□ -0.67
AKAP13-222	ENST00000560676	MVP	Q14764	893 aa	Known RBP	10.85	□□□□□ -0.67
AKAP13-222	ENST00000560676	TBC1D2	Q9BYX2	928 aa		10.85	□□□□□ -0.67
AKAP13-222	ENST00000560676	MLEC	Q14165	292 aa		10.84	□□□□□ -0.67
AKAP13-222	ENST00000560676	TRAK1	Q9UPV9	953 aa		10.84	□□□□□ -0.67
AKAP13-222	ENST00000560676	NOS1	P29475	1434 aa		10.84	□□□□□ -0.67
AKAP13-222	ENST00000560676	KIF1B	O60333	1816 aa		10.84	□□□□□ -0.67
AKAP13-222	ENST00000560676	ZKSCAN2	Q63HK3	967 aa		10.84	□□□□□ -0.67
AKAP13-222	ENST00000560676	BCL2L13	Q9BXK5	485 aa		10.84	□□□□□ -0.67
AKAP13-222	ENST00000560676	C14orf93	Q9H972	538 aa	Known RBP	10.84	□□□□□ -0.67
AKAP13-222	ENST00000560676	MROH1	Q8NDA8	1641 aa		10.83	□□□□□ -0.67
AKAP13-222	ENST00000560676	FTSJ3	Q8IY81	847 aa	Known RBP	10.83	□□□□□ -0.67
AKAP13-222	ENST00000560676	PUS7	Q96PZ0	661 aa	Known RBP	10.83	□□□□□ -0.67
AKAP13-222	ENST00000560676	RSPH6A	Q9H0K4	717 aa		10.83	□□□□□ -0.67
AKAP13-222	ENST00000560676	IFT172	Q9UG01	1749 aa		10.83	□□□□□ -0.68
AKAP13-222	ENST00000560676	TNN	Q9UQP3	1299 aa		10.83	□□□□□ -0.68
AKAP13-222	ENST00000560676	NSD2	O96028	1365 aa		10.83	□□□□□ -0.68
AKAP13-222	ENST00000560676	DZIP1L	Q8IYY4	767 aa	Known RBP	10.83	□□□□□ -0.68
AKAP13-222	ENST00000560676	ADGRL1	O94910	1474 aa		10.83	□□□□□ -0.68
AKAP13-222	ENST00000560676	LMTK2	Q8IWU2	1503 aa		10.83	□□□□□ -0.68
AKAP13-222	ENST00000560676	ADGRB3	O60242	1522 aa		10.82	□□□□□ -0.68
AKAP13-222	ENST00000560676	USP32	Q8NFA0	1604 aa		10.82	□□□□□ -0.68
AKAP13-222	ENST00000560676	ABCA9	Q8IUA7	1624 aa		10.82	□□□□□ -0.68
AKAP13-222	ENST00000560676	CHGA	P10645	457 aa	Known RBP	10.82	□□□□□ -0.68
AKAP13-222	ENST00000560676	RPGRIP1L	Q68CZ1	1315 aa		10.81	□□□□□ -0.68
AKAP13-222	ENST00000560676	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.81	□□□□□ -0.68
AKAP13-222	ENST00000560676	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
AKAP13-222	ENST00000560676	HDAC1	Q13547	482 aa	Predicted RBP	10.8	□□□□□ -0.68
AKAP13-222	ENST00000560676	C22orf23	Q9BZE7	217 aa		10.8	□□□□□ -0.68
AKAP13-222	ENST00000560676	EVC2	Q86UK5	1308 aa		10.8	□□□□□ -0.68
AKAP13-222	ENST00000560676	MROH2A	A6NES4	1674 aa		10.8	□□□□□ -0.68
AKAP13-222	ENST00000560676	ANKRD36B	Q8N2N9	1353 aa		10.8	□□□□□ -0.68
AKAP13-222	ENST00000560676	CHMP5	Q9NZZ3	219 aa		10.8	□□□□□ -0.68
AKAP13-222	ENST00000560676	DDX19B	Q9UMR2	479 aa		10.8	□□□□□ -0.68
AKAP13-222	ENST00000560676	MCM4	P33991	863 aa		10.79	□□□□□ -0.68
AKAP13-222	ENST00000560676	FAM69C	Q0P6D2	419 aa		10.79	□□□□□ -0.68
AKAP13-222	ENST00000560676	SMC4	Q9NTJ3	1288 aa		10.79	□□□□□ -0.68
AKAP13-222	ENST00000560676	ADGRB1	O14514	1584 aa		10.79	□□□□□ -0.68
AKAP13-222	ENST00000560676	PPRC1	Q5VV67	1664 aa	Known RBP	10.79	□□□□□ -0.68
AKAP13-222	ENST00000560676	GOLGA6L3	A6NEY3	463 aa		10.79	□□□□□ -0.68
AKAP13-222	ENST00000560676	QRICH2	Q9H0J4	1663 aa		10.78	□□□□□ -0.68
AKAP13-222	ENST00000560676	MFAP1	P55081	439 aa	Known RBP	10.78	□□□□□ -0.68
AKAP13-222	ENST00000560676	TMEM132E	Q6IEE7	984 aa		10.78	□□□□□ -0.68
AKAP13-222	ENST00000560676	ZC3H13	Q5T200	1668 aa	Known RBP	10.78	□□□□□ -0.68
AKAP13-222	ENST00000560676	ADGRB2	O60241	1585 aa		10.77	□□□□□ -0.69
AKAP13-222	ENST00000560676	TRIM27	P14373	513 aa		10.77	□□□□□ -0.69
AKAP13-222	ENST00000560676	ATF7IP	Q6VMQ6	1270 aa		10.77	□□□□□ -0.69
AKAP13-222	ENST00000560676	IL16	Q14005	1332 aa		10.77	□□□□□ -0.69
AKAP13-222	ENST00000560676	FSD2	A1L4K1	749 aa		10.76	□□□□□ -0.69
AKAP13-222	ENST00000560676	EXOSC9	Q06265	439 aa	Known RBP	10.76	□□□□□ -0.69
AKAP13-222	ENST00000560676	ITPRIP	Q8IWB1	547 aa		10.76	□□□□□ -0.69
AKAP13-222	ENST00000560676	HSCB	Q8IWL3	235 aa		10.76	□□□□□ -0.69
AKAP13-222	ENST00000560676	SMC5	Q8IY18	1101 aa		10.76	□□□□□ -0.69
AKAP13-222	ENST00000560676	TSR2	Q969E8	191 aa	Known RBP	10.76	□□□□□ -0.69
AKAP13-222	ENST00000560676	SPRYD3	Q8NCJ5	442 aa		10.76	□□□□□ -0.69
AKAP13-222	ENST00000560676	NPAT	Q14207	1427 aa		10.76	□□□□□ -0.69
AKAP13-222	ENST00000560676	ABCC11	Q96J66	1382 aa		10.75	□□□□□ -0.69
AKAP13-222	ENST00000560676	TMPO	P42166	694 aa	Known RBP	10.75	□□□□□ -0.69
AKAP13-222	ENST00000560676	SSH1	Q8WYL5	1049 aa		10.75	□□□□□ -0.69
AKAP13-222	ENST00000560676	IPO8	O15397	1037 aa	Known RBP	10.75	□□□□□ -0.69
AKAP13-222	ENST00000560676	PLEKHF1	Q96S99	279 aa		10.75	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms