RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 SULF1Q8IWU6 871 aa6.86□□□□□ -1.31
HMGB3P26-201ENST00000560051 DDX11L8A8MPP1 907 aa6.85□□□□□ -1.31
HMGB3P26-201ENST00000560051 AXIN1O15169 862 aa6.85□□□□□ -1.31
HMGB3P26-201ENST00000560051 PDIA4P13667 645 aaKnown RBP6.85□□□□□ -1.31
HMGB3P26-201ENST00000560051 TREML4Q6UXN2 200 aa6.85□□□□□ -1.31
HMGB3P26-201ENST00000560051 FCF1Q9Y324 198 aaKnown RBP6.85□□□□□ -1.31
HMGB3P26-201ENST00000560051 CCDC9Q9Y3X0 531 aaKnown RBP6.85□□□□□ -1.31
HMGB3P26-201ENST00000560051 TTC24A2A3L6 582 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P26-201ENST00000560051 GNPATO15228 680 aa6.84□□□□□ -1.31
HMGB3P26-201ENST00000560051 CTC1Q2NKJ3 1217 aa6.84□□□□□ -1.31
HMGB3P26-201ENST00000560051 PKD2L1Q9P0L9 805 aa6.84□□□□□ -1.31
HMGB3P26-201ENST00000560051 C11orf95C9JLR9 678 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P26-201ENST00000560051 FUT2Q10981 343 aa6.83□□□□□ -1.32
HMGB3P26-201ENST00000560051 MORN1Q5T089 497 aa6.83□□□□□ -1.32
HMGB3P26-201ENST00000560051 CRIPAKQ8N1N5 446 aa6.82□□□□□ -1.32
HMGB3P26-201ENST00000560051 UBE2Q2Q8WVN8 375 aa6.82□□□□□ -1.32
HMGB3P26-201ENST00000560051 SALL2Q9Y467 1007 aaPredicted RBP6.82□□□□□ -1.32
HMGB3P26-201ENST00000560051 TOR4AQ9NXH8 423 aa6.81□□□□□ -1.32
HMGB3P26-201ENST00000560051 SLC27A5Q9Y2P5 690 aa6.81□□□□□ -1.32
HMGB3P26-201ENST00000560051 WFS1O76024 890 aa6.8□□□□□ -1.32
HMGB3P26-201ENST00000560051 AVPP01185 164 aa6.8□□□□□ -1.32
HMGB3P26-201ENST00000560051 GCGRP47871 477 aa6.8□□□□□ -1.32
HMGB3P26-201ENST00000560051 RBM26Q5T8P6 1007 aaKnown RBP6.8□□□□□ -1.32
HMGB3P26-201ENST00000560051 NEFLP07196 543 aa6.79□□□□□ -1.32
HMGB3P26-201ENST00000560051 FECHP22830 423 aa6.79□□□□□ -1.32
HMGB3P26-201ENST00000560051 BRD2P25440 801 aaKnown RBP6.79□□□□□ -1.32
HMGB3P26-201ENST00000560051 Q3C1V9 767 aa6.79□□□□□ -1.32
HMGB3P26-201ENST00000560051 THAP11Q96EK4 314 aa6.79□□□□□ -1.32
HMGB3P26-201ENST00000560051 BRPF1P55201 1214 aaPredicted RBP6.78□□□□□ -1.32
HMGB3P26-201ENST00000560051 FAM160A2Q8N612 972 aaPredicted RBP6.78□□□□□ -1.32
HMGB3P26-201ENST00000560051 GMPR2Q9P2T1 348 aaKnown RBP6.78□□□□□ -1.32
HMGB3P26-201ENST00000560051 TESPA1A2RU30 521 aaPredicted RBP6.77□□□□□ -1.33
HMGB3P26-201ENST00000560051 SMCPP49901 116 aaPredicted RBP6.77□□□□□ -1.33
HMGB3P26-201ENST00000560051 MSS51Q4VC12 460 aa6.77□□□□□ -1.33
HMGB3P26-201ENST00000560051 BRICD5Q6PL45 260 aa6.77□□□□□ -1.33
HMGB3P26-201ENST00000560051 SNIP1Q8TAD8 396 aaKnown RBP6.77□□□□□ -1.33
HMGB3P26-201ENST00000560051 INSM1Q01101 510 aaPredicted RBP6.76□□□□□ -1.33
HMGB3P26-201ENST00000560051 REPIN1Q9BWE0 567 aaKnown RBP6.76□□□□□ -1.33
HMGB3P26-201ENST00000560051 DACH1Q9UI36 760 aa6.76□□□□□ -1.33
HMGB3P26-201ENST00000560051 WNT7AO00755 349 aa6.75□□□□□ -1.33
HMGB3P26-201ENST00000560051 TAF7LQ5H9L4 462 aa6.75□□□□□ -1.33
HMGB3P26-201ENST00000560051 SENP2Q9HC62 589 aa6.75□□□□□ -1.33
HMGB3P26-201ENST00000560051 PRDM9Q9NQV7 894 aa6.75□□□□□ -1.33
HMGB3P26-201ENST00000560051 NLRP7Q8WX94 980 aa6.74□□□□□ -1.33
HMGB3P26-201ENST00000560051 ZBTB7CA1YPR0 619 aa6.73□□□□□ -1.33
HMGB3P26-201ENST00000560051 TRIM32Q13049 653 aa6.73□□□□□ -1.33
HMGB3P26-201ENST00000560051 RNF19BQ6ZMZ0 732 aa6.73□□□□□ -1.33
HMGB3P26-201ENST00000560051 GPIHBP1Q8IV16 184 aa6.73□□□□□ -1.33
HMGB3P26-201ENST00000560051 STK17AQ9UEE5 414 aa6.73□□□□□ -1.33
HMGB3P26-201ENST00000560051 IGSF3O75054 1194 aa6.72□□□□□ -1.33
HMGB3P26-201ENST00000560051 CCDC24Q8N4L8 307 aa6.72□□□□□ -1.33
HMGB3P26-201ENST00000560051 PUS7Q96PZ0 661 aaKnown RBP6.72□□□□□ -1.33
HMGB3P26-201ENST00000560051 USB1Q9BQ65 265 aaKnown RBP6.72□□□□□ -1.33
HMGB3P26-201ENST00000560051 ATP13A2Q9NQ11 1180 aa6.72□□□□□ -1.33
HMGB3P26-201ENST00000560051 LCE2AQ5TA79 106 aaPredicted RBP6.71□□□□□ -1.34
HMGB3P26-201ENST00000560051 KIFC2Q96AC6 838 aa6.71□□□□□ -1.34
HMGB3P26-201ENST00000560051 MRGPRX2Q96LB1 330 aa6.71□□□□□ -1.34
HMGB3P26-201ENST00000560051 ARID3AQ99856 593 aa6.71□□□□□ -1.34
HMGB3P26-201ENST00000560051 CHMP4AQ9BY43 222 aa6.71□□□□□ -1.34
HMGB3P26-201ENST00000560051 ZMYND15Q9H091 742 aa6.71□□□□□ -1.34
HMGB3P26-201ENST00000560051 KDM4AO75164 1064 aa6.7□□□□□ -1.34
HMGB3P26-201ENST00000560051 SMPD1P17405 629 aa6.7□□□□□ -1.34
HMGB3P26-201ENST00000560051 MMP16P51512 607 aa6.7□□□□□ -1.34
HMGB3P26-201ENST00000560051 USP46P62068 366 aa6.7□□□□□ -1.34
HMGB3P26-201ENST00000560051 PDE4CQ08493 712 aa6.69□□□□□ -1.34
HMGB3P26-201ENST00000560051 NFX1Q12986 1120 aaKnown RBP6.69□□□□□ -1.34
HMGB3P26-201ENST00000560051 SLC16A10Q8TF71 515 aa6.69□□□□□ -1.34
HMGB3P26-201ENST00000560051 PHOX2BQ99453 314 aa6.69□□□□□ -1.34
HMGB3P26-201ENST00000560051 FAM181BA6NEQ2 426 aa6.68□□□□□ -1.34
HMGB3P26-201ENST00000560051 J3QL48 77 aa6.68□□□□□ -1.34
HMGB3P26-201ENST00000560051 TERTO14746 1132 aaKnown RBP6.68□□□□□ -1.34
HMGB3P26-201ENST00000560051 GPR37O15354 613 aa6.68□□□□□ -1.34
HMGB3P26-201ENST00000560051 WIPF1O43516 503 aa6.68□□□□□ -1.34
HMGB3P26-201ENST00000560051 ZNF326Q5BKZ1 582 aaKnown RBP6.68□□□□□ -1.34
HMGB3P26-201ENST00000560051 TRIM47Q96LD4 638 aa6.68□□□□□ -1.34
HMGB3P26-201ENST00000560051 RSPH6AQ9H0K4 717 aa6.68□□□□□ -1.34
HMGB3P26-201ENST00000560051 DXOO77932 396 aaKnown RBP6.67□□□□□ -1.34
HMGB3P26-201ENST00000560051 CD46P15529 392 aa6.67□□□□□ -1.34
HMGB3P26-201ENST00000560051 WNT7BP56706 349 aa6.67□□□□□ -1.34
HMGB3P26-201ENST00000560051 RC3H1Q5TC82 1133 aaKnown RBP6.67□□□□□ -1.34
HMGB3P26-201ENST00000560051 BCCIPQ9P287 314 aaKnown RBP eCLIP6.67□□□□□ -1.34
HMGB3P26-201ENST00000560051 SNRPBP14678 240 aaKnown RBP6.66□□□□□ -1.34
HMGB3P26-201ENST00000560051 KRI1Q8N9T8 703 aaKnown RBP6.66□□□□□ -1.34
HMGB3P26-201ENST00000560051 HPS1Q92902 700 aa6.66□□□□□ -1.34
HMGB3P26-201ENST00000560051 C1orf115Q9H7X2 142 aa6.66□□□□□ -1.34
HMGB3P26-201ENST00000560051 ALDH1A1P00352 501 aa6.65□□□□□ -1.34
HMGB3P26-201ENST00000560051 MAP2K5Q13163 448 aa6.65□□□□□ -1.34
HMGB3P26-201ENST00000560051 NEUROD2Q15784 382 aa6.64□□□□□ -1.35
HMGB3P26-201ENST00000560051 NUTM1Q86Y26 1132 aa6.64□□□□□ -1.35
HMGB3P26-201ENST00000560051 WASF2Q9Y6W5 498 aa6.64□□□□□ -1.35
HMGB3P26-201ENST00000560051 MDM2Q00987 491 aaPredicted RBP6.63□□□□□ -1.35
HMGB3P26-201ENST00000560051 EHBP1Q8NDI1 1231 aa6.63□□□□□ -1.35
HMGB3P26-201ENST00000560051 IRF6O14896 467 aa6.62□□□□□ -1.35
HMGB3P26-201ENST00000560051 JUNDP17535 347 aa6.62□□□□□ -1.35
HMGB3P26-201ENST00000560051 MINK1Q8N4C8 1332 aaPredicted RBP6.61□□□□□ -1.35
HMGB3P26-201ENST00000560051 HOXA2O43364 376 aa6.61□□□□□ -1.35
HMGB3P26-201ENST00000560051 SKOR1P84550 965 aa6.61□□□□□ -1.35
HMGB3P26-201ENST00000560051 NUDT12Q9BQG2 462 aa6.61□□□□□ -1.35
HMGB3P26-201ENST00000560051 NXF1Q9UBU9 619 aaKnown RBP6.61□□□□□ -1.35
HMGB3P26-201ENST00000560051 CAPN5O15484 640 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms