RNA–Protein interactions for RNA: ENST00000559757.1

RNF111-208, Transcript of ring finger protein 111, humanhuman

TSL 4

Gene RNF111, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-208ENST00000559757 C1orf167Q5SNV9 1468 aa24.57■■□□□ 1.52
RNF111-208ENST00000559757 NHSL1Q5SYE7 1610 aa24.56■■□□□ 1.52
RNF111-208ENST00000559757 PLEKHH1Q9ULM0 1364 aa24.54■■□□□ 1.52
RNF111-208ENST00000559757 JCADQ9P266 1359 aa24.54■■□□□ 1.52
RNF111-208ENST00000559757 FMN2Q9NZ56 1722 aa24.5■■□□□ 1.51
RNF111-208ENST00000559757 PRAM1Q96QH2 718 aa24.5■■□□□ 1.51
RNF111-208ENST00000559757 SIN3AQ96ST3 1273 aa24.5■■□□□ 1.51
RNF111-208ENST00000559757 POGKQ9P215 609 aa24.5■■□□□ 1.51
RNF111-208ENST00000559757 NEUROD1Q13562 356 aa24.48■■□□□ 1.51
RNF111-208ENST00000559757 SHPRHQ149N8 1683 aa24.48■■□□□ 1.51
RNF111-208ENST00000559757 TRAK1Q9UPV9 953 aa24.48■■□□□ 1.51
RNF111-208ENST00000559757 L3MBTL2Q969R5 705 aa24.46■■□□□ 1.51
RNF111-208ENST00000559757 ARHGEF28Q8N1W1 1705 aaKnown RBP24.46■■□□□ 1.51
RNF111-208ENST00000559757 ADGRB2O60241 1585 aa24.46■■□□□ 1.51
RNF111-208ENST00000559757 PHF23Q9BUL5 403 aaPredicted RBP24.45■■□□□ 1.5
RNF111-208ENST00000559757 ORAI2Q96SN7 254 aa24.44■■□□□ 1.5
RNF111-208ENST00000559757 SPATA31A6Q5VVP1 1343 aa24.43■■□□□ 1.5
RNF111-208ENST00000559757 SAFB2Q14151 953 aaKnown RBP eCLIP24.43■■□□□ 1.5
RNF111-208ENST00000559757 ESCO1Q5FWF5 840 aa24.43■■□□□ 1.5
RNF111-208ENST00000559757 LRRC59Q96AG4 307 aaKnown RBP24.43■■□□□ 1.5
RNF111-208ENST00000559757 KIF1AQ12756 1690 aa24.42■■□□□ 1.5
RNF111-208ENST00000559757 EIF3AQ14152 1382 aaKnown RBP24.4■■□□□ 1.5
RNF111-208ENST00000559757 NPHP3Q7Z494 1330 aa24.39■■□□□ 1.5
RNF111-208ENST00000559757 NUTM2FA1L443 756 aa24.39■■□□□ 1.49
RNF111-208ENST00000559757 DDX17Q92841 729 aaKnown RBP24.38■■□□□ 1.49
RNF111-208ENST00000559757 SOS2Q07890 1332 aaPredicted RBP24.37■■□□□ 1.49
RNF111-208ENST00000559757 ANKARQ7Z5J8 1434 aa24.37■■□□□ 1.49
RNF111-208ENST00000559757 RGPD8O14715 1765 aaPredicted RBP24.37■■□□□ 1.49
RNF111-208ENST00000559757 TRPM1Q7Z4N2 1603 aa24.37■■□□□ 1.49
RNF111-208ENST00000559757 TONSLQ96HA7 1378 aa24.37■■□□□ 1.49
RNF111-208ENST00000559757 NBPF1Q3BBV0 1214 aa24.36■■□□□ 1.49
RNF111-208ENST00000559757 MINK1Q8N4C8 1332 aaPredicted RBP24.35■■□□□ 1.49
RNF111-208ENST00000559757 PNPLA6Q8IY17 1366 aa24.32■■□□□ 1.48
RNF111-208ENST00000559757 TULP4Q9NRJ4 1543 aa24.32■■□□□ 1.48
RNF111-208ENST00000559757 FOXO3O43524 673 aa24.32■■□□□ 1.48
RNF111-208ENST00000559757 HIRIP3Q9BW71 556 aaPredicted RBP24.32■■□□□ 1.48
RNF111-208ENST00000559757 PXDNQ92626 1479 aa24.32■■□□□ 1.48
RNF111-208ENST00000559757 USP32Q8NFA0 1604 aa24.32■■□□□ 1.48
RNF111-208ENST00000559757 WASLO00401 505 aaPredicted RBP24.31■■□□□ 1.48
RNF111-208ENST00000559757 LRP6O75581 1613 aa24.31■■□□□ 1.48
RNF111-208ENST00000559757 ILDR2Q71H61 639 aa24.3■■□□□ 1.48
RNF111-208ENST00000559757 PCGF6Q9BYE7 350 aa24.3■■□□□ 1.48
RNF111-208ENST00000559757 PHF8Q9UPP1 1060 aa24.3■■□□□ 1.48
RNF111-208ENST00000559757 MEX3CQ5U5Q3 659 aaKnown RBP24.29■■□□□ 1.48
RNF111-208ENST00000559757 ROCK2O75116 1388 aaKnown RBP24.29■■□□□ 1.48
RNF111-208ENST00000559757 ITSN1Q15811 1721 aa24.28■■□□□ 1.48
RNF111-208ENST00000559757 CENPJQ9HC77 1338 aaPredicted RBP24.27■■□□□ 1.48
RNF111-208ENST00000559757 COL22A1Q8NFW1 1626 aaPredicted RBP24.27■■□□□ 1.48
RNF111-208ENST00000559757 QRICH2Q9H0J4 1663 aa24.26■■□□□ 1.47
RNF111-208ENST00000559757 NUTM2BA6NNL0 878 aaPredicted RBP24.25■■□□□ 1.47
RNF111-208ENST00000559757 NUTM2EB1AL46 878 aaPredicted RBP24.25■■□□□ 1.47
RNF111-208ENST00000559757 NUTM2AQ8IVF1 878 aaPredicted RBP24.25■■□□□ 1.47
RNF111-208ENST00000559757 PSME1Q06323 249 aa24.24■■□□□ 1.47
RNF111-208ENST00000559757 XPCQ01831 940 aaPredicted RBP24.23■■□□□ 1.47
RNF111-208ENST00000559757 RGS17Q9UGC6 210 aaPredicted RBP24.23■■□□□ 1.47
RNF111-208ENST00000559757 CLSPNQ9HAW4 1339 aa24.23■■□□□ 1.47
RNF111-208ENST00000559757 GPRASP1Q5JY77 1395 aa24.23■■□□□ 1.47
RNF111-208ENST00000559757 NBPF8Q3BBV2 869 aa24.22■■□□□ 1.47
RNF111-208ENST00000559757 KRT28Q7Z3Y7 464 aa24.22■■□□□ 1.47
RNF111-208ENST00000559757 ATP7BP35670 1465 aa24.21■■□□□ 1.47
RNF111-208ENST00000559757 PRR36Q9H6K5 1346 aa24.21■■□□□ 1.47
RNF111-208ENST00000559757 RALGAPBQ86X10 1494 aa24.2■■□□□ 1.47
RNF111-208ENST00000559757 PMFBP1Q8TBY8 1022 aa24.2■■□□□ 1.46
RNF111-208ENST00000559757 CDK19Q9BWU1 502 aa24.2■■□□□ 1.46
RNF111-208ENST00000559757 SPATA31A3Q5VYP0 1347 aa24.19■■□□□ 1.46
RNF111-208ENST00000559757 SBNO1A3KN83 1393 aa24.18■■□□□ 1.46
RNF111-208ENST00000559757 ZNF772Q68DY9 489 aaPredicted RBP24.18■■□□□ 1.46
RNF111-208ENST00000559757 NUDT16Q96DE0 195 aaKnown RBP24.18■■□□□ 1.46
RNF111-208ENST00000559757 TNS3Q68CZ2 1445 aa24.18■■□□□ 1.46
RNF111-208ENST00000559757 TOPAZ1Q8N9V7 1692 aa24.18■■□□□ 1.46
RNF111-208ENST00000559757 NGDNQ8NEJ9 315 aaKnown RBP24.15■■□□□ 1.46
RNF111-208ENST00000559757 CARD11Q9BXL7 1154 aa24.15■■□□□ 1.46
RNF111-208ENST00000559757 CCDC61Q9Y6R9 512 aa24.15■■□□□ 1.46
RNF111-208ENST00000559757 ARHGEF10O15013 1369 aa24.15■■□□□ 1.46
RNF111-208ENST00000559757 SRPK2P78362 688 aaKnown RBP24.14■■□□□ 1.45
RNF111-208ENST00000559757 TRPM3Q9HCF6 1732 aaPredicted RBP24.14■■□□□ 1.45
RNF111-208ENST00000559757 MARF1Q9Y4F3 1742 aaKnown RBP24.13■■□□□ 1.45
RNF111-208ENST00000559757 SOCS7O14512 581 aa24.13■■□□□ 1.45
RNF111-208ENST00000559757 TIMELESSQ9UNS1 1208 aa24.13■■□□□ 1.45
RNF111-208ENST00000559757 ADAMTS2O95450 1211 aa24.12■■□□□ 1.45
RNF111-208ENST00000559757 POTEAQ6S8J7 498 aa24.12■■□□□ 1.45
RNF111-208ENST00000559757 C8orf37Q96NL8 207 aa24.12■■□□□ 1.45
RNF111-208ENST00000559757 AFF2P51816 1311 aa24.11■■□□□ 1.45
RNF111-208ENST00000559757 EVC2Q86UK5 1308 aa24.11■■□□□ 1.45
RNF111-208ENST00000559757 ALS2Q96Q42 1657 aa24.09■■□□□ 1.45
RNF111-208ENST00000559757 SBNO2Q9Y2G9 1366 aa24.09■■□□□ 1.45
RNF111-208ENST00000559757 NGLY1Q96IV0 654 aa24.09■■□□□ 1.45
RNF111-208ENST00000559757 POLR3AO14802 1390 aaPredicted RBP24.08■■□□□ 1.45
RNF111-208ENST00000559757 PLEKHG3A1L390 1219 aa24.08■■□□□ 1.45
RNF111-208ENST00000559757 LMOD2Q6P5Q4 547 aa24.08■■□□□ 1.45
RNF111-208ENST00000559757 CABP2Q9NPB3 220 aa24.07■■□□□ 1.44
RNF111-208ENST00000559757 PPIP5K1Q6PFW1 1433 aa24.07■■□□□ 1.44
RNF111-208ENST00000559757 HAP1P54257 671 aaPredicted RBP24.06■■□□□ 1.44
RNF111-208ENST00000559757 ABCA3Q99758 1704 aa24.06■■□□□ 1.44
RNF111-208ENST00000559757 CCER1Q8TC90 406 aaPredicted RBP24.05■■□□□ 1.44
RNF111-208ENST00000559757 ACEP12821 1306 aa24.05■■□□□ 1.44
RNF111-208ENST00000559757 PAK3O75914 559 aaPredicted RBP24.03■■□□□ 1.44
RNF111-208ENST00000559757 FNBP4Q8N3X1 1017 aaPredicted RBP24.02■■□□□ 1.44
RNF111-208ENST00000559757 ATAD2Q6PL18 1390 aa24.01■■□□□ 1.43
RNF111-208ENST00000559757 USP21Q9UK80 565 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms