RNA–Protein interactions for RNA: ENST00000558777.5

RMDN3-207, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 2

Gene RMDN3, Length 2,139 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-207ENST00000558777 RIMBP3BA6NNM3 1639 aa22.48■■□□□ 1.19
RMDN3-207ENST00000558777 RIMBP3Q9UFD9 1639 aa22.48■■□□□ 1.19
RMDN3-207ENST00000558777 CGNL1Q0VF96 1302 aa22.48■■□□□ 1.19
RMDN3-207ENST00000558777 ANKRD36BQ8N2N9 1353 aa22.47■■□□□ 1.19
RMDN3-207ENST00000558777 FBXO31Q5XUX0 539 aaPredicted RBP22.45■■□□□ 1.18
RMDN3-207ENST00000558777 PPP6R1Q9UPN7 881 aa22.45■■□□□ 1.18
RMDN3-207ENST00000558777 REREQ9P2R6 1566 aa22.44■■□□□ 1.18
RMDN3-207ENST00000558777 C20orf194Q5TEA3 1177 aa22.44■■□□□ 1.18
RMDN3-207ENST00000558777 SPINK5Q9NQ38 1064 aaPredicted RBP22.44■■□□□ 1.18
RMDN3-207ENST00000558777 E9PSI1 815 aa22.43■■□□□ 1.18
RMDN3-207ENST00000558777 NSD2O96028 1365 aa22.43■■□□□ 1.18
RMDN3-207ENST00000558777 AGLP35573 1532 aa22.43■■□□□ 1.18
RMDN3-207ENST00000558777 TCERG1O14776 1098 aaKnown RBP22.43■■□□□ 1.18
RMDN3-207ENST00000558777 CABP2Q9NPB3 220 aa22.43■■□□□ 1.18
RMDN3-207ENST00000558777 NKTRP30414 1462 aaKnown RBP22.42■■□□□ 1.18
RMDN3-207ENST00000558777 MYO5BQ9ULV0 1848 aa22.42■■□□□ 1.18
RMDN3-207ENST00000558777 NINLQ9Y2I6 1382 aa22.42■■□□□ 1.18
RMDN3-207ENST00000558777 SHPRHQ149N8 1683 aa22.42■■□□□ 1.18
RMDN3-207ENST00000558777 TNNT2P45379 298 aaPredicted RBP22.41■■□□□ 1.18
RMDN3-207ENST00000558777 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.41■■□□□ 1.18
RMDN3-207ENST00000558777 PTPRMP28827 1452 aa22.41■■□□□ 1.18
RMDN3-207ENST00000558777 STK26Q9P289 416 aa22.4■■□□□ 1.18
RMDN3-207ENST00000558777 SAFB2Q14151 953 aaKnown RBP eCLIP22.39■■□□□ 1.18
RMDN3-207ENST00000558777 YTHDC2Q9H6S0 1430 aaKnown RBP22.39■■□□□ 1.17
RMDN3-207ENST00000558777 MTHFSP49914 203 aa22.39■■□□□ 1.17
RMDN3-207ENST00000558777 RUNDC1Q96C34 613 aa22.37■■□□□ 1.17
RMDN3-207ENST00000558777 DMRT2Q9Y5R5 561 aa22.37■■□□□ 1.17
RMDN3-207ENST00000558777 WWC1Q8IX03 1113 aa22.37■■□□□ 1.17
RMDN3-207ENST00000558777 CFAP53Q96M91 514 aa22.36■■□□□ 1.17
RMDN3-207ENST00000558777 MS4A1P11836 297 aa22.36■■□□□ 1.17
RMDN3-207ENST00000558777 PRAM1Q96QH2 718 aa22.35■■□□□ 1.17
RMDN3-207ENST00000558777 A0A1W2PP64 1363 aa22.35■■□□□ 1.17
RMDN3-207ENST00000558777 ATAD2Q6PL18 1390 aa22.35■■□□□ 1.17
RMDN3-207ENST00000558777 ABCC11Q96J66 1382 aa22.35■■□□□ 1.17
RMDN3-207ENST00000558777 ALKQ9UM73 1620 aa22.35■■□□□ 1.17
RMDN3-207ENST00000558777 SRPK2P78362 688 aaKnown RBP22.34■■□□□ 1.17
RMDN3-207ENST00000558777 IQSEC2Q5JU85 1478 aa22.34■■□□□ 1.17
RMDN3-207ENST00000558777 SENP3Q9H4L4 574 aaPredicted RBP22.33■■□□□ 1.17
RMDN3-207ENST00000558777 KDM2BQ8NHM5 1336 aa22.33■■□□□ 1.16
RMDN3-207ENST00000558777 ERICH6Q7L0X2 663 aa22.33■■□□□ 1.16
RMDN3-207ENST00000558777 PHF23Q9BUL5 403 aaPredicted RBP22.33■■□□□ 1.16
RMDN3-207ENST00000558777 STAG3Q9UJ98 1225 aa22.33■■□□□ 1.16
RMDN3-207ENST00000558777 TSPOAP1O95153 1857 aa22.33■■□□□ 1.16
RMDN3-207ENST00000558777 POGKQ9P215 609 aa22.32■■□□□ 1.16
RMDN3-207ENST00000558777 MINK1Q8N4C8 1332 aaPredicted RBP22.31■■□□□ 1.16
RMDN3-207ENST00000558777 SPATA31D1Q6ZQQ2 1576 aa22.31■■□□□ 1.16
RMDN3-207ENST00000558777 TCP11L2Q8N4U5 519 aa22.31■■□□□ 1.16
RMDN3-207ENST00000558777 CLTCQ00610 1675 aaKnown RBP22.31■■□□□ 1.16
RMDN3-207ENST00000558777 A2ML1A8K2U0 1454 aa22.3■■□□□ 1.16
RMDN3-207ENST00000558777 NCBP3Q53F19 620 aaKnown RBP22.3■■□□□ 1.16
RMDN3-207ENST00000558777 BCAR3O75815 825 aa22.29■■□□□ 1.16
RMDN3-207ENST00000558777 ANP32AP39687 249 aaKnown RBP22.29■■□□□ 1.16
RMDN3-207ENST00000558777 TERF2IPQ9NYB0 399 aa22.29■■□□□ 1.16
RMDN3-207ENST00000558777 PDE4AP27815 886 aa22.28■■□□□ 1.16
RMDN3-207ENST00000558777 CCDC27Q2M243 656 aa22.28■■□□□ 1.16
RMDN3-207ENST00000558777 CD163L1Q9NR16 1453 aa22.28■■□□□ 1.16
RMDN3-207ENST00000558777 CENPQQ7L2Z9 268 aaPredicted RBP22.28■■□□□ 1.16
RMDN3-207ENST00000558777 ARHGEF40Q8TER5 1519 aa22.27■■□□□ 1.16
RMDN3-207ENST00000558777 WDR63Q8IWG1 891 aa22.27■■□□□ 1.16
RMDN3-207ENST00000558777 BACH2Q9BYV9 841 aa22.27■■□□□ 1.15
RMDN3-207ENST00000558777 MED14O60244 1454 aa22.27■■□□□ 1.15
RMDN3-207ENST00000558777 RRP7AQ9Y3A4 280 aaKnown RBP22.26■■□□□ 1.15
RMDN3-207ENST00000558777 RIMS2Q9UQ26 1411 aa22.25■■□□□ 1.15
RMDN3-207ENST00000558777 NEUROD2Q15784 382 aa22.25■■□□□ 1.15
RMDN3-207ENST00000558777 IPO9Q96P70 1041 aaKnown RBP22.25■■□□□ 1.15
RMDN3-207ENST00000558777 CDK19Q9BWU1 502 aa22.25■■□□□ 1.15
RMDN3-207ENST00000558777 NOP58Q9Y2X3 529 aaKnown RBP22.25■■□□□ 1.15
RMDN3-207ENST00000558777 DLC1Q96QB1 1528 aa22.24■■□□□ 1.15
RMDN3-207ENST00000558777 FYB1O15117 783 aa22.24■■□□□ 1.15
RMDN3-207ENST00000558777 GGNBP2Q9H3C7 697 aa22.24■■□□□ 1.15
RMDN3-207ENST00000558777 NLRP1Q9C000 1473 aa22.24■■□□□ 1.15
RMDN3-207ENST00000558777 U2AF1L5P0DN76 240 aaPredicted RBP22.22■■□□□ 1.15
RMDN3-207ENST00000558777 U2AF1Q01081 240 aaKnown RBP eCLIP22.22■■□□□ 1.15
RMDN3-207ENST00000558777 PDE3AQ14432 1141 aa22.22■■□□□ 1.15
RMDN3-207ENST00000558777 MLECQ14165 292 aa22.21■■□□□ 1.15
RMDN3-207ENST00000558777 HDGFL2Q7Z4V5 671 aaPredicted RBP22.21■■□□□ 1.15
RMDN3-207ENST00000558777 COL3A1P02461 1466 aaPredicted RBP22.2■■□□□ 1.14
RMDN3-207ENST00000558777 SKAP1Q86WV1 359 aa22.2■■□□□ 1.14
RMDN3-207ENST00000558777 ADGRB2O60241 1585 aa22.2■■□□□ 1.14
RMDN3-207ENST00000558777 CABP1Q9NZU7 370 aa22.19■■□□□ 1.14
RMDN3-207ENST00000558777 SETD1AO15047 1707 aaKnown RBP22.18■■□□□ 1.14
RMDN3-207ENST00000558777 ANKRD26Q9UPS8 1709 aa22.18■■□□□ 1.14
RMDN3-207ENST00000558777 PAK3O75914 559 aaPredicted RBP22.17■■□□□ 1.14
RMDN3-207ENST00000558777 RARSP54136 660 aaKnown RBP22.17■■□□□ 1.14
RMDN3-207ENST00000558777 WAPLQ7Z5K2 1190 aa22.16■■□□□ 1.14
RMDN3-207ENST00000558777 PLEKHF1Q96S99 279 aa22.16■■□□□ 1.14
RMDN3-207ENST00000558777 ZMYM3Q14202 1370 aa22.15■■□□□ 1.14
RMDN3-207ENST00000558777 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.15■■□□□ 1.14
RMDN3-207ENST00000558777 MYH16Q9H6N6 1097 aa22.15■■□□□ 1.14
RMDN3-207ENST00000558777 PNPLA6Q8IY17 1366 aa22.14■■□□□ 1.14
RMDN3-207ENST00000558777 ATP7BP35670 1465 aa22.13■■□□□ 1.13
RMDN3-207ENST00000558777 U2SURPO15042 1029 aaKnown RBP22.12■■□□□ 1.13
RMDN3-207ENST00000558777 CANXP27824 592 aaKnown RBP22.12■■□□□ 1.13
RMDN3-207ENST00000558777 ZBTB47Q9UFB7 747 aaPredicted RBP22.12■■□□□ 1.13
RMDN3-207ENST00000558777 NRXN3Q9Y4C0 1643 aa22.12■■□□□ 1.13
RMDN3-207ENST00000558777 KIF13AQ9H1H9 1805 aa22.12■■□□□ 1.13
RMDN3-207ENST00000558777 ESF1Q9H501 851 aaKnown RBP22.12■■□□□ 1.13
RMDN3-207ENST00000558777 PANK1Q8TE04 598 aa22.11■■□□□ 1.13
RMDN3-207ENST00000558777 METP08581 1390 aa22.1■■□□□ 1.13
RMDN3-207ENST00000558777 TMPOP42166 694 aaKnown RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms