RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.96■□□□□ 0.79
SUPT16H-208ENST00000557652 CDC42BPGQ6DT37 1551 aa19.96■□□□□ 0.79
SUPT16H-208ENST00000557652 QRICH2Q9H0J4 1663 aa19.96■□□□□ 0.79
SUPT16H-208ENST00000557652 PRAM1Q96QH2 718 aa19.95■□□□□ 0.78
SUPT16H-208ENST00000557652 CENPJQ9HC77 1338 aaPredicted RBP19.95■□□□□ 0.78
SUPT16H-208ENST00000557652 C14orf37Q86TY3 774 aa19.93■□□□□ 0.78
SUPT16H-208ENST00000557652 CADPS2Q86UW7 1296 aa19.93■□□□□ 0.78
SUPT16H-208ENST00000557652 WAPLQ7Z5K2 1190 aa19.91■□□□□ 0.78
SUPT16H-208ENST00000557652 USP47Q96K76 1375 aa19.91■□□□□ 0.78
SUPT16H-208ENST00000557652 PLEKHH1Q9ULM0 1364 aa19.9■□□□□ 0.78
SUPT16H-208ENST00000557652 TOM1O60784 492 aa19.89■□□□□ 0.77
SUPT16H-208ENST00000557652 ATF3P18847 181 aa19.89■□□□□ 0.77
SUPT16H-208ENST00000557652 FMN2Q9NZ56 1722 aa19.89■□□□□ 0.77
SUPT16H-208ENST00000557652 EIF4G2P78344 907 aaKnown RBP eCLIP19.87■□□□□ 0.77
SUPT16H-208ENST00000557652 ANKARQ7Z5J8 1434 aa19.85■□□□□ 0.77
SUPT16H-208ENST00000557652 ITSN1Q15811 1721 aa19.85■□□□□ 0.77
SUPT16H-208ENST00000557652 PUS7Q96PZ0 661 aaKnown RBP19.84■□□□□ 0.77
SUPT16H-208ENST00000557652 EVC2Q86UK5 1308 aa19.83■□□□□ 0.77
SUPT16H-208ENST00000557652 WASLO00401 505 aaPredicted RBP19.83■□□□□ 0.77
SUPT16H-208ENST00000557652 TULP4Q9NRJ4 1543 aa19.82■□□□□ 0.76
SUPT16H-208ENST00000557652 MINK1Q8N4C8 1332 aaPredicted RBP19.82■□□□□ 0.76
SUPT16H-208ENST00000557652 ST20-MTHFSA0A0A6YYL1 179 aa19.82■□□□□ 0.76
SUPT16H-208ENST00000557652 SAFB2Q14151 953 aaKnown RBP eCLIP19.82■□□□□ 0.76
SUPT16H-208ENST00000557652 RBM33Q96EV2 1170 aaKnown RBP19.82■□□□□ 0.76
SUPT16H-208ENST00000557652 MST1RQ04912 1400 aa19.82■□□□□ 0.76
SUPT16H-208ENST00000557652 CDCA8Q53HL2 280 aa19.8■□□□□ 0.76
SUPT16H-208ENST00000557652 SLAIN2Q9P270 581 aa19.8■□□□□ 0.76
SUPT16H-208ENST00000557652 KIF1AQ12756 1690 aa19.8■□□□□ 0.76
SUPT16H-208ENST00000557652 UBAP1LF5GYI3 381 aa19.79■□□□□ 0.76
SUPT16H-208ENST00000557652 TESK2Q96S53 571 aa19.79■□□□□ 0.76
SUPT16H-208ENST00000557652 RGPD8O14715 1765 aaPredicted RBP19.78■□□□□ 0.76
SUPT16H-208ENST00000557652 C1orf167Q5SNV9 1468 aa19.78■□□□□ 0.76
SUPT16H-208ENST00000557652 TMF1P82094 1093 aa19.77■□□□□ 0.76
SUPT16H-208ENST00000557652 ATAD2Q6PL18 1390 aa19.77■□□□□ 0.76
SUPT16H-208ENST00000557652 TOPAZ1Q8N9V7 1692 aa19.76■□□□□ 0.75
SUPT16H-208ENST00000557652 CDK19Q9BWU1 502 aa19.76■□□□□ 0.75
SUPT16H-208ENST00000557652 USP32Q8NFA0 1604 aa19.76■□□□□ 0.75
SUPT16H-208ENST00000557652 ATP7BP35670 1465 aa19.75■□□□□ 0.75
SUPT16H-208ENST00000557652 HIRIP3Q9BW71 556 aaPredicted RBP19.75■□□□□ 0.75
SUPT16H-208ENST00000557652 ROBO1Q9Y6N7 1651 aa19.75■□□□□ 0.75
SUPT16H-208ENST00000557652 HSPA5P11021 654 aaKnown RBP19.74■□□□□ 0.75
SUPT16H-208ENST00000557652 NINLQ9Y2I6 1382 aa19.73■□□□□ 0.75
SUPT16H-208ENST00000557652 FBXO41Q8TF61 875 aa19.73■□□□□ 0.75
SUPT16H-208ENST00000557652 CCDC61Q9Y6R9 512 aa19.73■□□□□ 0.75
SUPT16H-208ENST00000557652 SRPK2P78362 688 aaKnown RBP19.72■□□□□ 0.75
SUPT16H-208ENST00000557652 NUDT16Q96DE0 195 aaKnown RBP19.71■□□□□ 0.75
SUPT16H-208ENST00000557652 NHSL1Q5SYE7 1610 aa19.71■□□□□ 0.75
SUPT16H-208ENST00000557652 AHDC1Q5TGY3 1603 aaPredicted RBP19.7■□□□□ 0.74
SUPT16H-208ENST00000557652 BRINP3Q76B58 766 aa19.68■□□□□ 0.74
SUPT16H-208ENST00000557652 PLEKHG3A1L390 1219 aa19.67■□□□□ 0.74
SUPT16H-208ENST00000557652 ESCO1Q5FWF5 840 aa19.67■□□□□ 0.74
SUPT16H-208ENST00000557652 PHF8Q9UPP1 1060 aa19.67■□□□□ 0.74
SUPT16H-208ENST00000557652 NPHP3Q7Z494 1330 aa19.67■□□□□ 0.74
SUPT16H-208ENST00000557652 PRR36Q9H6K5 1346 aa19.67■□□□□ 0.74
SUPT16H-208ENST00000557652 BRD4O60885 1362 aaPredicted RBP19.67■□□□□ 0.74
SUPT16H-208ENST00000557652 CABP2Q9NPB3 220 aa19.66■□□□□ 0.74
SUPT16H-208ENST00000557652 DISP3Q9P2K9 1392 aa19.66■□□□□ 0.74
SUPT16H-208ENST00000557652 POLR3AO14802 1390 aaPredicted RBP19.65■□□□□ 0.74
SUPT16H-208ENST00000557652 PPIP5K1Q6PFW1 1433 aa19.65■□□□□ 0.74
SUPT16H-208ENST00000557652 AKAP12Q02952 1782 aa19.65■□□□□ 0.74
SUPT16H-208ENST00000557652 PHLPP1O60346 1717 aa19.64■□□□□ 0.73
SUPT16H-208ENST00000557652 NUTM2FA1L443 756 aa19.63■□□□□ 0.73
SUPT16H-208ENST00000557652 PIP4K2BP78356 416 aa19.63■□□□□ 0.73
SUPT16H-208ENST00000557652 ORAI2Q96SN7 254 aa19.63■□□□□ 0.73
SUPT16H-208ENST00000557652 SCAF1Q9H7N4 1312 aaKnown RBP19.62■□□□□ 0.73
SUPT16H-208ENST00000557652 ZNF692Q9BU19 519 aaPredicted RBP19.62■□□□□ 0.73
SUPT16H-208ENST00000557652 MON2Q7Z3U7 1717 aa19.6■□□□□ 0.73
SUPT16H-208ENST00000557652 SOS2Q07890 1332 aaPredicted RBP19.6■□□□□ 0.73
SUPT16H-208ENST00000557652 MYOM1P52179 1685 aa19.6■□□□□ 0.73
SUPT16H-208ENST00000557652 PSME1Q06323 249 aa19.6■□□□□ 0.73
SUPT16H-208ENST00000557652 COL16A1Q07092 1604 aaPredicted RBP19.59■□□□□ 0.73
SUPT16H-208ENST00000557652 NGDNQ8NEJ9 315 aaKnown RBP19.59■□□□□ 0.73
SUPT16H-208ENST00000557652 TERF2IPQ9NYB0 399 aa19.59■□□□□ 0.73
SUPT16H-208ENST00000557652 CABP1Q9NZU7 370 aa19.58■□□□□ 0.72
SUPT16H-208ENST00000557652 PXDNQ92626 1479 aa19.58■□□□□ 0.72
SUPT16H-208ENST00000557652 CPSF1Q10570 1443 aaKnown RBP19.58■□□□□ 0.72
SUPT16H-208ENST00000557652 SBNO1A3KN83 1393 aa19.57■□□□□ 0.72
SUPT16H-208ENST00000557652 ACEP12821 1306 aa19.57■□□□□ 0.72
SUPT16H-208ENST00000557652 TRPM3Q9HCF6 1732 aaPredicted RBP19.56■□□□□ 0.72
SUPT16H-208ENST00000557652 FOXO3O43524 673 aa19.56■□□□□ 0.72
SUPT16H-208ENST00000557652 HDGFL2Q7Z4V5 671 aaPredicted RBP19.56■□□□□ 0.72
SUPT16H-208ENST00000557652 ANKRD36BQ8N2N9 1353 aa19.56■□□□□ 0.72
SUPT16H-208ENST00000557652 PMFBP1Q8TBY8 1022 aa19.55■□□□□ 0.72
SUPT16H-208ENST00000557652 LRRC59Q96AG4 307 aaKnown RBP19.55■□□□□ 0.72
SUPT16H-208ENST00000557652 USP6P35125 1406 aa19.54■□□□□ 0.72
SUPT16H-208ENST00000557652 TMC1Q8TDI8 760 aa19.54■□□□□ 0.72
SUPT16H-208ENST00000557652 SHPRHQ149N8 1683 aa19.54■□□□□ 0.72
SUPT16H-208ENST00000557652 CCDC7Q96M83 1385 aa19.54■□□□□ 0.72
SUPT16H-208ENST00000557652 KIF7Q2M1P5 1343 aa19.53■□□□□ 0.72
SUPT16H-208ENST00000557652 KRT28Q7Z3Y7 464 aa19.53■□□□□ 0.72
SUPT16H-208ENST00000557652 CD163L1Q9NR16 1453 aa19.53■□□□□ 0.72
SUPT16H-208ENST00000557652 NRKQ7Z2Y5 1582 aa19.53■□□□□ 0.72
SUPT16H-208ENST00000557652 ALS2Q96Q42 1657 aa19.52■□□□□ 0.72
SUPT16H-208ENST00000557652 SLC12A5Q9H2X9 1139 aa19.52■□□□□ 0.72
SUPT16H-208ENST00000557652 ARHGEF10O15013 1369 aa19.52■□□□□ 0.72
SUPT16H-208ENST00000557652 TTC21AQ8NDW8 1320 aa19.51■□□□□ 0.71
SUPT16H-208ENST00000557652 TNS3Q68CZ2 1445 aa19.51■□□□□ 0.71
SUPT16H-208ENST00000557652 EDC4Q6P2E9 1401 aaKnown RBP19.51■□□□□ 0.71
SUPT16H-208ENST00000557652 KTN1Q86UP2 1357 aaKnown RBP19.51■□□□□ 0.71
SUPT16H-208ENST00000557652 COL22A1Q8NFW1 1626 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms