RNA–Protein interactions for RNA: ENST00000557290.1

PSMA3-212, Transcript of proteasome subunit alpha 3, humanhuman

TSL 2

Gene PSMA3, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-212ENST00000557290 SCUBE3Q8IX30 993 aa9.56□□□□□ -0.88
PSMA3-212ENST00000557290 RNF19BQ6ZMZ0 732 aa9.55□□□□□ -0.88
PSMA3-212ENST00000557290 A0A0G2JS52 829 aa9.54□□□□□ -0.88
PSMA3-212ENST00000557290 C6orf229H3BNL8 230 aa9.54□□□□□ -0.88
PSMA3-212ENST00000557290 NR1I2O75469 434 aa9.54□□□□□ -0.88
PSMA3-212ENST00000557290 HRCP23327 699 aa9.54□□□□□ -0.88
PSMA3-212ENST00000557290 TUSC1Q2TAM9 212 aa9.54□□□□□ -0.88
PSMA3-212ENST00000557290 TJAP1Q5JTD0 557 aa9.54□□□□□ -0.88
PSMA3-212ENST00000557290 ZNF516Q92618 1163 aa9.54□□□□□ -0.88
PSMA3-212ENST00000557290 NUTM2BA6NNL0 878 aaPredicted RBP9.53□□□□□ -0.88
PSMA3-212ENST00000557290 NUTM2EB1AL46 878 aaPredicted RBP9.53□□□□□ -0.88
PSMA3-212ENST00000557290 TLL1O43897 1013 aa9.53□□□□□ -0.88
PSMA3-212ENST00000557290 LILRB3O75022 631 aa9.53□□□□□ -0.88
PSMA3-212ENST00000557290 RTL5Q5HYW3 569 aaPredicted RBP9.53□□□□□ -0.88
PSMA3-212ENST00000557290 NUTM2DQ5VT03 806 aaPredicted RBP9.53□□□□□ -0.88
PSMA3-212ENST00000557290 NUTM2AQ8IVF1 878 aaPredicted RBP9.53□□□□□ -0.88
PSMA3-212ENST00000557290 ZBTB3Q9H5J0 574 aa9.53□□□□□ -0.88
PSMA3-212ENST00000557290 MTMR2Q13614 643 aa9.52□□□□□ -0.89
PSMA3-212ENST00000557290 Q3C1V9 767 aa9.52□□□□□ -0.89
PSMA3-212ENST00000557290 GTF3C3Q9Y5Q9 886 aa9.52□□□□□ -0.89
PSMA3-212ENST00000557290 RGS20O76081 388 aa9.51□□□□□ -0.89
PSMA3-212ENST00000557290 PRPF38BQ5VTL8 546 aaKnown RBP9.51□□□□□ -0.89
PSMA3-212ENST00000557290 THAP11Q96EK4 314 aa9.51□□□□□ -0.89
PSMA3-212ENST00000557290 ZPR1O75312 459 aa9.5□□□□□ -0.89
PSMA3-212ENST00000557290 RFC5P40937 340 aa9.5□□□□□ -0.89
PSMA3-212ENST00000557290 BRICD5Q6PL45 260 aa9.5□□□□□ -0.89
PSMA3-212ENST00000557290 IL21Q9HBE4 155 aa9.5□□□□□ -0.89
PSMA3-212ENST00000557290 FMNL1O95466 1100 aaPredicted RBP9.49□□□□□ -0.89
PSMA3-212ENST00000557290 PPP2R2DQ66LE6 453 aa9.49□□□□□ -0.89
PSMA3-212ENST00000557290 CFAP99D6REC4 459 aa9.48□□□□□ -0.89
PSMA3-212ENST00000557290 NKX2-3Q8TAU0 364 aa9.48□□□□□ -0.89
PSMA3-212ENST00000557290 TSC1Q92574 1164 aa9.48□□□□□ -0.89
PSMA3-212ENST00000557290 SPSB2Q99619 263 aa9.48□□□□□ -0.89
PSMA3-212ENST00000557290 KCNC4Q03721 635 aa9.47□□□□□ -0.89
PSMA3-212ENST00000557290 RETREG3Q86VR2 466 aa9.47□□□□□ -0.89
PSMA3-212ENST00000557290 PRR7Q8TB68 274 aa9.47□□□□□ -0.89
PSMA3-212ENST00000557290 USB1Q9BQ65 265 aaKnown RBP9.47□□□□□ -0.89
PSMA3-212ENST00000557290 SALL2Q9Y467 1007 aaPredicted RBP9.47□□□□□ -0.89
PSMA3-212ENST00000557290 SPDYE5A6NIY4 337 aa9.45□□□□□ -0.9
PSMA3-212ENST00000557290 AP1G2O75843 785 aa9.45□□□□□ -0.9
PSMA3-212ENST00000557290 FAM160A2Q8N612 972 aaPredicted RBP9.45□□□□□ -0.9
PSMA3-212ENST00000557290 PRDM9Q9NQV7 894 aa9.45□□□□□ -0.9
PSMA3-212ENST00000557290 ADH1BP00325 375 aa9.44□□□□□ -0.9
PSMA3-212ENST00000557290 CTDSPL2Q05D32 466 aa9.42□□□□□ -0.9
PSMA3-212ENST00000557290 TMEM259Q4ZIN3 620 aa9.41□□□□□ -0.9
PSMA3-212ENST00000557290 PER1O15534 1290 aaPredicted RBP9.4□□□□□ -0.9
PSMA3-212ENST00000557290 S1PR4O95977 384 aa9.4□□□□□ -0.9
PSMA3-212ENST00000557290 MSS51Q4VC12 460 aa9.4□□□□□ -0.9
PSMA3-212ENST00000557290 HELBQ8NG08 1087 aaPredicted RBP9.4□□□□□ -0.9
PSMA3-212ENST00000557290 SNRKQ9NRH2 765 aa9.4□□□□□ -0.9
PSMA3-212ENST00000557290 USP17L8P0C7I0 530 aa9.39□□□□□ -0.91
PSMA3-212ENST00000557290 JUNDP17535 347 aa9.39□□□□□ -0.91
PSMA3-212ENST00000557290 LRRN4Q8WUT4 740 aa9.39□□□□□ -0.91
PSMA3-212ENST00000557290 SLC6A16Q9GZN6 736 aa9.39□□□□□ -0.91
PSMA3-212ENST00000557290 DXOO77932 396 aaKnown RBP9.37□□□□□ -0.91
PSMA3-212ENST00000557290 BANK1Q8NDB2 785 aa9.37□□□□□ -0.91
PSMA3-212ENST00000557290 MMP16P51512 607 aa9.36□□□□□ -0.91
PSMA3-212ENST00000557290 MCM6Q14566 821 aa9.36□□□□□ -0.91
PSMA3-212ENST00000557290 DESI1Q6ICB0 168 aa9.36□□□□□ -0.91
PSMA3-212ENST00000557290 PPEF1O14829 653 aaPredicted RBP9.35□□□□□ -0.91
PSMA3-212ENST00000557290 LYPD8Q6UX82 237 aa9.35□□□□□ -0.91
PSMA3-212ENST00000557290 MTMR14Q8NCE2 650 aa9.35□□□□□ -0.91
PSMA3-212ENST00000557290 HMX1Q9NP08 348 aaPredicted RBP9.35□□□□□ -0.91
PSMA3-212ENST00000557290 FLIIQ13045 1269 aa9.33□□□□□ -0.92
PSMA3-212ENST00000557290 PTPRNQ16849 979 aa9.33□□□□□ -0.92
PSMA3-212ENST00000557290 IRX2Q9BZI1 471 aaPredicted RBP9.33□□□□□ -0.92
PSMA3-212ENST00000557290 PPP1R18Q6NYC8 613 aa9.32□□□□□ -0.92
PSMA3-212ENST00000557290 CCDC24Q8N4L8 307 aa9.32□□□□□ -0.92
PSMA3-212ENST00000557290 EPS8L1Q8TE68 723 aa9.32□□□□□ -0.92
PSMA3-212ENST00000557290 NUDT12Q9BQG2 462 aa9.32□□□□□ -0.92
PSMA3-212ENST00000557290 MAP10Q9P2G4 905 aa9.32□□□□□ -0.92
PSMA3-212ENST00000557290 FCF1Q9Y324 198 aaKnown RBP9.32□□□□□ -0.92
PSMA3-212ENST00000557290 RNF223E7ERA6 249 aa9.31□□□□□ -0.92
PSMA3-212ENST00000557290 CCNYL3P0C7X3 344 aa9.31□□□□□ -0.92
PSMA3-212ENST00000557290 CTHP32929 405 aa9.3□□□□□ -0.92
PSMA3-212ENST00000557290 NR6A1Q15406 480 aa9.3□□□□□ -0.92
PSMA3-212ENST00000557290 F12P00748 615 aaPredicted RBP9.29□□□□□ -0.92
PSMA3-212ENST00000557290 C14orf37Q86TY3 774 aa9.29□□□□□ -0.92
PSMA3-212ENST00000557290 GJD4Q96KN9 370 aaPredicted RBP9.29□□□□□ -0.92
PSMA3-212ENST00000557290 TRIM34Q9BYJ4 488 aa9.29□□□□□ -0.92
PSMA3-212ENST00000557290 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.29□□□□□ -0.92
PSMA3-212ENST00000557290 UBTFP17480 764 aaKnown RBP9.28□□□□□ -0.92
PSMA3-212ENST00000557290 GGCXP38435 758 aa9.28□□□□□ -0.92
PSMA3-212ENST00000557290 PTCRAQ6ISU1 281 aaPredicted RBP9.28□□□□□ -0.92
PSMA3-212ENST00000557290 POM121Q96HA1 1249 aa9.28□□□□□ -0.92
PSMA3-212ENST00000557290 EVA1BQ9NVM1 165 aa9.28□□□□□ -0.92
PSMA3-212ENST00000557290 TIMELESSQ9UNS1 1208 aa9.28□□□□□ -0.92
PSMA3-212ENST00000557290 KCNH2Q12809 1159 aa9.27□□□□□ -0.93
PSMA3-212ENST00000557290 PLA2G2CQ5R387 149 aa9.27□□□□□ -0.93
PSMA3-212ENST00000557290 CLUAP1Q96AJ1 413 aa9.27□□□□□ -0.93
PSMA3-212ENST00000557290 ANKLE1Q8NAG6 615 aa9.26□□□□□ -0.93
PSMA3-212ENST00000557290 TBC1D2BQ9UPU7 963 aa9.26□□□□□ -0.93
PSMA3-212ENST00000557290 GDPD2Q9HCC8 539 aa9.25□□□□□ -0.93
PSMA3-212ENST00000557290 COG6Q9Y2V7 657 aa9.24□□□□□ -0.93
PSMA3-212ENST00000557290 SOCS7O14512 581 aa9.23□□□□□ -0.93
PSMA3-212ENST00000557290 UNC93B1Q9H1C4 597 aa9.23□□□□□ -0.93
PSMA3-212ENST00000557290 NDUFB9Q9Y6M9 179 aa9.23□□□□□ -0.93
PSMA3-212ENST00000557290 APBB1O00213 710 aa9.22□□□□□ -0.93
PSMA3-212ENST00000557290 ABL2P42684 1182 aa9.22□□□□□ -0.93
PSMA3-212ENST00000557290 PRKD2Q9BZL6 878 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms