RNA–Protein interactions for RNA: ENST00000557206.1

HIF1A-210, Transcript of hypoxia inducible factor 1 subunit alpha, human

TSL 3

Gene HIF1A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIF1A-210	ENST00000557206	COPS2	P61201	443 aa		10.57	□□□□□ -0.72
HIF1A-210	ENST00000557206	MTMR2	Q13614	643 aa		10.57	□□□□□ -0.72
HIF1A-210	ENST00000557206	PRPF38B	Q5VTL8	546 aa	Known RBP	10.57	□□□□□ -0.72
HIF1A-210	ENST00000557206	BLOC1S3	Q6QNY0	202 aa		10.57	□□□□□ -0.72
HIF1A-210	ENST00000557206	PCDHGC3	Q9UN70	934 aa		10.57	□□□□□ -0.72
HIF1A-210	ENST00000557206	SCUBE3	Q8IX30	993 aa		10.56	□□□□□ -0.72
HIF1A-210	ENST00000557206	SPDYE5	A6NIY4	337 aa		10.54	□□□□□ -0.72
HIF1A-210	ENST00000557206	LILRB3	O75022	631 aa		10.54	□□□□□ -0.72
HIF1A-210	ENST00000557206	FMNL1	O95466	1100 aa	Predicted RBP	10.54	□□□□□ -0.72
HIF1A-210	ENST00000557206	HRC	P23327	699 aa		10.54	□□□□□ -0.72
HIF1A-210	ENST00000557206	QPCT	Q16769	361 aa		10.54	□□□□□ -0.72
HIF1A-210	ENST00000557206	CABLES1	Q8TDN4	633 aa		10.54	□□□□□ -0.72
HIF1A-210	ENST00000557206	MTR	Q99707	1265 aa		10.54	□□□□□ -0.72
HIF1A-210	ENST00000557206	PPP2R2D	Q66LE6	453 aa		10.52	□□□□□ -0.73
HIF1A-210	ENST00000557206	TSC1	Q92574	1164 aa		10.52	□□□□□ -0.73
HIF1A-210	ENST00000557206	SYMPK	Q92797	1274 aa	Known RBP	10.52	□□□□□ -0.73
HIF1A-210	ENST00000557206	IL21	Q9HBE4	155 aa		10.52	□□□□□ -0.73
HIF1A-210	ENST00000557206	SALL2	Q9Y467	1007 aa	Predicted RBP	10.52	□□□□□ -0.73
HIF1A-210	ENST00000557206	RFC5	P40937	340 aa		10.51	□□□□□ -0.73
HIF1A-210	ENST00000557206	ZPR1	O75312	459 aa		10.5	□□□□□ -0.73
HIF1A-210	ENST00000557206	TMEM259	Q4ZIN3	620 aa		10.5	□□□□□ -0.73
HIF1A-210	ENST00000557206	RTL5	Q5HYW3	569 aa	Predicted RBP	10.5	□□□□□ -0.73
HIF1A-210	ENST00000557206	RETREG3	Q86VR2	466 aa		10.5	□□□□□ -0.73
HIF1A-210	ENST00000557206	BRICD5	Q6PL45	260 aa		10.49	□□□□□ -0.73
HIF1A-210	ENST00000557206	RNF19B	Q6ZMZ0	732 aa		10.49	□□□□□ -0.73
HIF1A-210	ENST00000557206	SPSB2	Q99619	263 aa		10.49	□□□□□ -0.73
HIF1A-210	ENST00000557206	USB1	Q9BQ65	265 aa	Known RBP	10.49	□□□□□ -0.73
HIF1A-210	ENST00000557206	AP1G2	O75843	785 aa		10.48	□□□□□ -0.73
HIF1A-210	ENST00000557206	TJAP1	Q5JTD0	557 aa		10.48	□□□□□ -0.73
HIF1A-210	ENST00000557206	HELB	Q8NG08	1087 aa	Predicted RBP	10.48	□□□□□ -0.73
HIF1A-210	ENST00000557206	PRR7	Q8TB68	274 aa		10.48	□□□□□ -0.73
HIF1A-210	ENST00000557206	KCNC4	Q03721	635 aa		10.46	□□□□□ -0.73
HIF1A-210	ENST00000557206	ZNF516	Q92618	1163 aa		10.46	□□□□□ -0.73
HIF1A-210	ENST00000557206	THAP11	Q96EK4	314 aa		10.46	□□□□□ -0.73
HIF1A-210	ENST00000557206	FLII	Q13045	1269 aa		10.45	□□□□□ -0.74
HIF1A-210	ENST00000557206	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.45	□□□□□ -0.74
HIF1A-210	ENST00000557206	CFAP99	D6REC4	459 aa		10.44	□□□□□ -0.74
HIF1A-210	ENST00000557206	ADH1B	P00325	375 aa		10.44	□□□□□ -0.74
HIF1A-210	ENST00000557206	BANK1	Q8NDB2	785 aa		10.44	□□□□□ -0.74
HIF1A-210	ENST00000557206	TLL1	O43897	1013 aa		10.43	□□□□□ -0.74
HIF1A-210	ENST00000557206	IFFO2	Q5TF58	517 aa		10.43	□□□□□ -0.74
HIF1A-210	ENST00000557206	ERICH6	Q7L0X2	663 aa		10.42	□□□□□ -0.74
HIF1A-210	ENST00000557206	RGS20	O76081	388 aa		10.41	□□□□□ -0.74
HIF1A-210	ENST00000557206	MSS51	Q4VC12	460 aa		10.41	□□□□□ -0.74
HIF1A-210	ENST00000557206	DESI1	Q6ICB0	168 aa		10.41	□□□□□ -0.74
HIF1A-210	ENST00000557206	SLC6A16	Q9GZN6	736 aa		10.41	□□□□□ -0.74
HIF1A-210	ENST00000557206	CTDSPL2	Q05D32	466 aa		10.4	□□□□□ -0.74
HIF1A-210	ENST00000557206	ITGBL1	O95965	494 aa	Predicted RBP	10.39	□□□□□ -0.75
HIF1A-210	ENST00000557206	USP17L8	P0C7I0	530 aa		10.39	□□□□□ -0.75
HIF1A-210	ENST00000557206	JUND	P17535	347 aa		10.39	□□□□□ -0.75
HIF1A-210	ENST00000557206	C14orf37	Q86TY3	774 aa		10.39	□□□□□ -0.75
HIF1A-210	ENST00000557206	FAM160A2	Q8N612	972 aa	Predicted RBP	10.39	□□□□□ -0.75
HIF1A-210	ENST00000557206	APBB1	O00213	710 aa		10.38	□□□□□ -0.75
HIF1A-210	ENST00000557206	NKX2-3	Q8TAU0	364 aa		10.38	□□□□□ -0.75
HIF1A-210	ENST00000557206	PRM3	Q9NNZ6	103 aa		10.37	□□□□□ -0.75
HIF1A-210	ENST00000557206	GGCX	P38435	758 aa		10.36	□□□□□ -0.75
HIF1A-210	ENST00000557206	PRDM9	Q9NQV7	894 aa		10.36	□□□□□ -0.75
HIF1A-210	ENST00000557206	SNRK	Q9NRH2	765 aa		10.36	□□□□□ -0.75
HIF1A-210	ENST00000557206	UBTF	P17480	764 aa	Known RBP	10.35	□□□□□ -0.75
HIF1A-210	ENST00000557206	MCM6	Q14566	821 aa		10.35	□□□□□ -0.75
HIF1A-210	ENST00000557206	LYPD8	Q6UX82	237 aa		10.35	□□□□□ -0.75
HIF1A-210	ENST00000557206	DXO	O77932	396 aa	Known RBP	10.34	□□□□□ -0.75
HIF1A-210	ENST00000557206	S1PR4	O95977	384 aa		10.34	□□□□□ -0.75
HIF1A-210	ENST00000557206	MMP16	P51512	607 aa		10.34	□□□□□ -0.75
HIF1A-210	ENST00000557206	PTPRN	Q16849	979 aa		10.34	□□□□□ -0.75
HIF1A-210	ENST00000557206	LRRN4	Q8WUT4	740 aa		10.34	□□□□□ -0.75
HIF1A-210	ENST00000557206		A0A0G2JS52	829 aa		10.33	□□□□□ -0.76
HIF1A-210	ENST00000557206	PER1	O15534	1290 aa	Predicted RBP	10.33	□□□□□ -0.76
HIF1A-210	ENST00000557206	CCDC24	Q8N4L8	307 aa		10.33	□□□□□ -0.76
HIF1A-210	ENST00000557206	NUDT12	Q9BQG2	462 aa		10.33	□□□□□ -0.76
HIF1A-210	ENST00000557206	RAD21	O60216	631 aa		10.32	□□□□□ -0.76
HIF1A-210	ENST00000557206	CTH	P32929	405 aa		10.32	□□□□□ -0.76
HIF1A-210	ENST00000557206	CCNYL3	P0C7X3	344 aa		10.31	□□□□□ -0.76
HIF1A-210	ENST00000557206	MTMR14	Q8NCE2	650 aa		10.3	□□□□□ -0.76
HIF1A-210	ENST00000557206	PNMA1	Q8ND90	353 aa		10.3	□□□□□ -0.76
HIF1A-210	ENST00000557206	SOCS7	O14512	581 aa		10.29	□□□□□ -0.76
HIF1A-210	ENST00000557206	HMX1	Q9NP08	348 aa	Predicted RBP	10.29	□□□□□ -0.76
HIF1A-210	ENST00000557206	NR6A1	Q15406	480 aa		10.28	□□□□□ -0.76
HIF1A-210	ENST00000557206	EVA1B	Q9NVM1	165 aa		10.28	□□□□□ -0.76
HIF1A-210	ENST00000557206	FCF1	Q9Y324	198 aa	Known RBP	10.28	□□□□□ -0.76
HIF1A-210	ENST00000557206	PPEF1	O14829	653 aa	Predicted RBP	10.27	□□□□□ -0.77
HIF1A-210	ENST00000557206	PPP1R18	Q6NYC8	613 aa		10.27	□□□□□ -0.77
HIF1A-210	ENST00000557206	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	10.27	□□□□□ -0.77
HIF1A-210	ENST00000557206	NDUFB9	Q9Y6M9	179 aa		10.27	□□□□□ -0.77
HIF1A-210	ENST00000557206	KCNH2	Q12809	1159 aa		10.26	□□□□□ -0.77
HIF1A-210	ENST00000557206	IRX2	Q9BZI1	471 aa	Predicted RBP	10.26	□□□□□ -0.77
HIF1A-210	ENST00000557206	MAP10	Q9P2G4	905 aa		10.26	□□□□□ -0.77
HIF1A-210	ENST00000557206	TIMELESS	Q9UNS1	1208 aa		10.26	□□□□□ -0.77
HIF1A-210	ENST00000557206	RNF223	E7ERA6	249 aa		10.25	□□□□□ -0.77
HIF1A-210	ENST00000557206	ZBTB24	O43167	697 aa	Predicted RBP	10.25	□□□□□ -0.77
HIF1A-210	ENST00000557206	WWC1	Q8IX03	1113 aa		10.25	□□□□□ -0.77
HIF1A-210	ENST00000557206	ANKLE1	Q8NAG6	615 aa		10.25	□□□□□ -0.77
HIF1A-210	ENST00000557206	F12	P00748	615 aa	Predicted RBP	10.24	□□□□□ -0.77
HIF1A-210	ENST00000557206	CLUAP1	Q96AJ1	413 aa		10.24	□□□□□ -0.77
HIF1A-210	ENST00000557206	GJD4	Q96KN9	370 aa	Predicted RBP	10.24	□□□□□ -0.77
HIF1A-210	ENST00000557206	ZMYND15	Q9H091	742 aa		10.24	□□□□□ -0.77
HIF1A-210	ENST00000557206	ABL2	P42684	1182 aa		10.23	□□□□□ -0.77
HIF1A-210	ENST00000557206	ARMC2	Q8NEN0	867 aa		10.23	□□□□□ -0.77
HIF1A-210	ENST00000557206	EPS8L1	Q8TE68	723 aa		10.23	□□□□□ -0.77
HIF1A-210	ENST00000557206	GDPD2	Q9HCC8	539 aa		10.23	□□□□□ -0.77

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