RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 C1orf167Q5SNV9 1468 aa32.59■■■□□ 2.81
PABPN1-206ENST00000556809 DLC1Q96QB1 1528 aa32.58■■■□□ 2.81
PABPN1-206ENST00000556809 SIN3AQ96ST3 1273 aa32.58■■■□□ 2.81
PABPN1-206ENST00000556809 NHSL1Q5SYE7 1610 aa32.56■■■□□ 2.8
PABPN1-206ENST00000556809 KIAA1210Q9ULL0 1709 aa32.52■■■□□ 2.8
PABPN1-206ENST00000556809 NEUROD1Q13562 356 aa32.52■■■□□ 2.8
PABPN1-206ENST00000556809 L3MBTL2Q969R5 705 aa32.49■■■□□ 2.79
PABPN1-206ENST00000556809 JCADQ9P266 1359 aa32.48■■■□□ 2.79
PABPN1-206ENST00000556809 PRAM1Q96QH2 718 aa32.48■■■□□ 2.79
PABPN1-206ENST00000556809 ORAI2Q96SN7 254 aa32.48■■■□□ 2.79
PABPN1-206ENST00000556809 FMN2Q9NZ56 1722 aa32.47■■■□□ 2.79
PABPN1-206ENST00000556809 TRAK1Q9UPV9 953 aa32.46■■■□□ 2.79
PABPN1-206ENST00000556809 DDX17Q92841 729 aaKnown RBP32.43■■■□□ 2.78
PABPN1-206ENST00000556809 SHPRHQ149N8 1683 aa32.43■■■□□ 2.78
PABPN1-206ENST00000556809 ARHGEF28Q8N1W1 1705 aaKnown RBP32.42■■■□□ 2.78
PABPN1-206ENST00000556809 POGKQ9P215 609 aa32.41■■■□□ 2.78
PABPN1-206ENST00000556809 SAFB2Q14151 953 aaKnown RBP eCLIP32.4■■■□□ 2.78
PABPN1-206ENST00000556809 CLSPNQ9HAW4 1339 aa32.4■■■□□ 2.78
PABPN1-206ENST00000556809 ADGRB2O60241 1585 aa32.4■■■□□ 2.78
PABPN1-206ENST00000556809 NBPF1Q3BBV0 1214 aa32.38■■■□□ 2.77
PABPN1-206ENST00000556809 ILDR2Q71H61 639 aa32.38■■■□□ 2.77
PABPN1-206ENST00000556809 CCER1Q8TC90 406 aaPredicted RBP32.37■■■□□ 2.77
PABPN1-206ENST00000556809 SOS2Q07890 1332 aaPredicted RBP32.36■■■□□ 2.77
PABPN1-206ENST00000556809 NUTM2FA1L443 756 aa32.36■■■□□ 2.77
PABPN1-206ENST00000556809 ESCO1Q5FWF5 840 aa32.36■■■□□ 2.77
PABPN1-206ENST00000556809 RGPD8O14715 1765 aaPredicted RBP32.35■■■□□ 2.77
PABPN1-206ENST00000556809 LRRC59Q96AG4 307 aaKnown RBP32.34■■■□□ 2.77
PABPN1-206ENST00000556809 TONSLQ96HA7 1378 aa32.33■■■□□ 2.77
PABPN1-206ENST00000556809 SPATA31A6Q5VVP1 1343 aa32.33■■■□□ 2.77
PABPN1-206ENST00000556809 TRPM1Q7Z4N2 1603 aa32.31■■■□□ 2.76
PABPN1-206ENST00000556809 LRP6O75581 1613 aa32.3■■■□□ 2.76
PABPN1-206ENST00000556809 USP32Q8NFA0 1604 aa32.3■■■□□ 2.76
PABPN1-206ENST00000556809 PHF23Q9BUL5 403 aaPredicted RBP32.29■■■□□ 2.76
PABPN1-206ENST00000556809 KIF1AQ12756 1690 aa32.29■■■□□ 2.76
PABPN1-206ENST00000556809 MINK1Q8N4C8 1332 aaPredicted RBP32.28■■■□□ 2.76
PABPN1-206ENST00000556809 HIRIP3Q9BW71 556 aaPredicted RBP32.28■■■□□ 2.76
PABPN1-206ENST00000556809 RGS17Q9UGC6 210 aaPredicted RBP32.28■■■□□ 2.76
PABPN1-206ENST00000556809 PXDNQ92626 1479 aa32.28■■■□□ 2.76
PABPN1-206ENST00000556809 NPHP3Q7Z494 1330 aa32.27■■■□□ 2.76
PABPN1-206ENST00000556809 PNPLA6Q8IY17 1366 aa32.27■■■□□ 2.76
PABPN1-206ENST00000556809 FOXO3O43524 673 aa32.26■■■□□ 2.75
PABPN1-206ENST00000556809 ANKARQ7Z5J8 1434 aa32.26■■■□□ 2.75
PABPN1-206ENST00000556809 WASLO00401 505 aaPredicted RBP32.23■■■□□ 2.75
PABPN1-206ENST00000556809 NBPF8Q3BBV2 869 aa32.22■■■□□ 2.75
PABPN1-206ENST00000556809 TULP4Q9NRJ4 1543 aa32.21■■■□□ 2.75
PABPN1-206ENST00000556809 PHF8Q9UPP1 1060 aa32.2■■■□□ 2.75
PABPN1-206ENST00000556809 PRR36Q9H6K5 1346 aa32.2■■■□□ 2.74
PABPN1-206ENST00000556809 EIF3AQ14152 1382 aaKnown RBP32.19■■■□□ 2.74
PABPN1-206ENST00000556809 COL22A1Q8NFW1 1626 aaPredicted RBP32.18■■■□□ 2.74
PABPN1-206ENST00000556809 XPCQ01831 940 aaPredicted RBP32.17■■■□□ 2.74
PABPN1-206ENST00000556809 NUTM2BA6NNL0 878 aaPredicted RBP32.14■■■□□ 2.74
PABPN1-206ENST00000556809 NUTM2EB1AL46 878 aaPredicted RBP32.14■■■□□ 2.74
PABPN1-206ENST00000556809 NUTM2AQ8IVF1 878 aaPredicted RBP32.14■■■□□ 2.74
PABPN1-206ENST00000556809 ROCK2O75116 1388 aaKnown RBP32.14■■■□□ 2.74
PABPN1-206ENST00000556809 GPRASP1Q5JY77 1395 aa32.13■■■□□ 2.73
PABPN1-206ENST00000556809 CENPJQ9HC77 1338 aaPredicted RBP32.13■■■□□ 2.73
PABPN1-206ENST00000556809 TIMELESSQ9UNS1 1208 aa32.13■■■□□ 2.73
PABPN1-206ENST00000556809 ATP7BP35670 1465 aa32.12■■■□□ 2.73
PABPN1-206ENST00000556809 KRT28Q7Z3Y7 464 aa32.12■■■□□ 2.73
PABPN1-206ENST00000556809 QRICH2Q9H0J4 1663 aa32.11■■■□□ 2.73
PABPN1-206ENST00000556809 CDK19Q9BWU1 502 aa32.11■■■□□ 2.73
PABPN1-206ENST00000556809 PMFBP1Q8TBY8 1022 aa32.1■■■□□ 2.73
PABPN1-206ENST00000556809 ITSN1Q15811 1721 aa32.09■■■□□ 2.73
PABPN1-206ENST00000556809 SPATA31A3Q5VYP0 1347 aa32.09■■■□□ 2.73
PABPN1-206ENST00000556809 MEX3CQ5U5Q3 659 aaKnown RBP32.09■■■□□ 2.73
PABPN1-206ENST00000556809 POTEAQ6S8J7 498 aa32.09■■■□□ 2.73
PABPN1-206ENST00000556809 NUDT16Q96DE0 195 aaKnown RBP32.07■■■□□ 2.72
PABPN1-206ENST00000556809 RALGAPBQ86X10 1494 aa32.06■■■□□ 2.72
PABPN1-206ENST00000556809 TOPAZ1Q8N9V7 1692 aa32.05■■■□□ 2.72
PABPN1-206ENST00000556809 PSME1Q06323 249 aa32.04■■■□□ 2.72
PABPN1-206ENST00000556809 SBNO1A3KN83 1393 aa32.04■■■□□ 2.72
PABPN1-206ENST00000556809 TRPM3Q9HCF6 1732 aaPredicted RBP32.03■■■□□ 2.72
PABPN1-206ENST00000556809 TNS3Q68CZ2 1445 aa32.02■■■□□ 2.72
PABPN1-206ENST00000556809 SOCS7O14512 581 aa32■■■□□ 2.71
PABPN1-206ENST00000556809 ADAMTS2O95450 1211 aa31.98■■■□□ 2.71
PABPN1-206ENST00000556809 ZNF772Q68DY9 489 aaPredicted RBP31.98■■■□□ 2.71
PABPN1-206ENST00000556809 CCDC61Q9Y6R9 512 aa31.98■■■□□ 2.71
PABPN1-206ENST00000556809 MARF1Q9Y4F3 1742 aaKnown RBP31.97■■■□□ 2.71
PABPN1-206ENST00000556809 C8orf37Q96NL8 207 aa31.96■■■□□ 2.71
PABPN1-206ENST00000556809 CARD11Q9BXL7 1154 aa31.96■■■□□ 2.71
PABPN1-206ENST00000556809 AFF2P51816 1311 aa31.96■■■□□ 2.71
PABPN1-206ENST00000556809 ALS2Q96Q42 1657 aa31.95■■■□□ 2.71
PABPN1-206ENST00000556809 NGDNQ8NEJ9 315 aaKnown RBP31.95■■■□□ 2.71
PABPN1-206ENST00000556809 POLR3AO14802 1390 aaPredicted RBP31.94■■■□□ 2.7
PABPN1-206ENST00000556809 PLEKHG3A1L390 1219 aa31.94■■■□□ 2.7
PABPN1-206ENST00000556809 CABP2Q9NPB3 220 aa31.94■■■□□ 2.7
PABPN1-206ENST00000556809 SRPK2P78362 688 aaKnown RBP31.93■■■□□ 2.7
PABPN1-206ENST00000556809 ARHGEF10O15013 1369 aa31.93■■■□□ 2.7
PABPN1-206ENST00000556809 ABCA3Q99758 1704 aa31.91■■■□□ 2.7
PABPN1-206ENST00000556809 NGLY1Q96IV0 654 aa31.9■■■□□ 2.7
PABPN1-206ENST00000556809 SBNO2Q9Y2G9 1366 aa31.9■■■□□ 2.7
PABPN1-206ENST00000556809 ACEP12821 1306 aa31.89■■■□□ 2.7
PABPN1-206ENST00000556809 EVC2Q86UK5 1308 aa31.89■■■□□ 2.7
PABPN1-206ENST00000556809 FNBP4Q8N3X1 1017 aaPredicted RBP31.88■■■□□ 2.69
PABPN1-206ENST00000556809 PPIP5K1Q6PFW1 1433 aa31.88■■■□□ 2.69
PABPN1-206ENST00000556809 LMOD2Q6P5Q4 547 aa31.86■■■□□ 2.69
PABPN1-206ENST00000556809 CABLES1Q8TDN4 633 aa31.85■■■□□ 2.69
PABPN1-206ENST00000556809 CRYBG1Q9Y4K1 1723 aa31.83■■■□□ 2.69
PABPN1-206ENST00000556809 CABP1Q9NZU7 370 aa31.81■■■□□ 2.68
PABPN1-206ENST00000556809 QTRT2Q9H974 415 aaKnown RBP31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms