RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 KDM5CP41229 1560 aa21.45■■□□□ 1.02
PCNX1-209ENST00000554879 TET3O43151 1660 aa21.44■■□□□ 1.02
PCNX1-209ENST00000554879 RIMS2Q9UQ26 1411 aa21.44■■□□□ 1.02
PCNX1-209ENST00000554879 AMER1Q5JTC6 1135 aaPredicted RBP21.43■■□□□ 1.02
PCNX1-209ENST00000554879 COL17A1Q9UMD9 1497 aaPredicted RBP21.43■■□□□ 1.02
PCNX1-209ENST00000554879 KIDINS220Q9ULH0 1771 aa21.43■■□□□ 1.02
PCNX1-209ENST00000554879 E9PCH4 1651 aa21.43■■□□□ 1.02
PCNX1-209ENST00000554879 PDE3BQ13370 1112 aa21.43■■□□□ 1.02
PCNX1-209ENST00000554879 ABCC3O15438 1527 aa21.43■■□□□ 1.02
PCNX1-209ENST00000554879 EFCAB6Q5THR3 1501 aa21.43■■□□□ 1.02
PCNX1-209ENST00000554879 CLTCL1P53675 1640 aa21.43■■□□□ 1.02
PCNX1-209ENST00000554879 CARD14Q9BXL6 1004 aa21.42■■□□□ 1.02
PCNX1-209ENST00000554879 NUTM2GQ5VZR2 741 aa21.41■■□□□ 1.02
PCNX1-209ENST00000554879 NAP1L5Q96NT1 182 aaPredicted RBP21.39■■□□□ 1.02
PCNX1-209ENST00000554879 NUDT16Q96DE0 195 aaKnown RBP21.39■■□□□ 1.01
PCNX1-209ENST00000554879 LTV1Q96GA3 475 aaPredicted RBP21.39■■□□□ 1.01
PCNX1-209ENST00000554879 MAGI2Q86UL8 1455 aa21.38■■□□□ 1.01
PCNX1-209ENST00000554879 ATAD2Q6PL18 1390 aa21.38■■□□□ 1.01
PCNX1-209ENST00000554879 AMOTL2Q9Y2J4 779 aa21.38■■□□□ 1.01
PCNX1-209ENST00000554879 DIAPH1O60610 1272 aaKnown RBP21.37■■□□□ 1.01
PCNX1-209ENST00000554879 ANKLE2Q86XL3 938 aa21.37■■□□□ 1.01
PCNX1-209ENST00000554879 HMOX1P09601 288 aa21.37■■□□□ 1.01
PCNX1-209ENST00000554879 FBLN1P23142 703 aa21.36■■□□□ 1.01
PCNX1-209ENST00000554879 PNNQ9H307 717 aaKnown RBP21.36■■□□□ 1.01
PCNX1-209ENST00000554879 CEP152O94986 1710 aa21.36■■□□□ 1.01
PCNX1-209ENST00000554879 CCDC61Q9Y6R9 512 aa21.35■■□□□ 1.01
PCNX1-209ENST00000554879 PARD3Q8TEW0 1356 aa21.34■■□□□ 1.01
PCNX1-209ENST00000554879 AMPHP49418 695 aa21.34■■□□□ 1.01
PCNX1-209ENST00000554879 SPHKAPQ2M3C7 1700 aa21.34■■□□□ 1.01
PCNX1-209ENST00000554879 ABCA6Q8N139 1617 aa21.34■■□□□ 1.01
PCNX1-209ENST00000554879 BCORL1Q5H9F3 1711 aa21.34■■□□□ 1.01
PCNX1-209ENST00000554879 WASLO00401 505 aaPredicted RBP21.34■■□□□ 1.01
PCNX1-209ENST00000554879 BCL2L13Q9BXK5 485 aa21.34■■□□□ 1.01
PCNX1-209ENST00000554879 TCP11L2Q8N4U5 519 aa21.33■■□□□ 1.01
PCNX1-209ENST00000554879 NCKAP5LQ9HCH0 1330 aa21.33■■□□□ 1.01
PCNX1-209ENST00000554879 DIP2CQ9Y2E4 1556 aa21.33■■□□□ 1
PCNX1-209ENST00000554879 BRPF3Q9ULD4 1205 aa21.32■■□□□ 1
PCNX1-209ENST00000554879 RNF17Q9BXT8 1623 aaKnown RBP21.32■■□□□ 1
PCNX1-209ENST00000554879 HAP1P54257 671 aaPredicted RBP21.32■■□□□ 1
PCNX1-209ENST00000554879 RUNDC1Q96C34 613 aa21.32■■□□□ 1
PCNX1-209ENST00000554879 KIF1BO60333 1816 aa21.31■■□□□ 1
PCNX1-209ENST00000554879 YTHDC2Q9H6S0 1430 aaKnown RBP21.31■■□□□ 1
PCNX1-209ENST00000554879 FTSJ3Q8IY81 847 aaKnown RBP21.3■■□□□ 1
PCNX1-209ENST00000554879 NME9Q86XW9 330 aa21.3■■□□□ 1
PCNX1-209ENST00000554879 PPRC1Q5VV67 1664 aaKnown RBP21.3■■□□□ 1
PCNX1-209ENST00000554879 RRP1P56182 461 aaKnown RBP21.3■■□□□ 1
PCNX1-209ENST00000554879 RRS1Q15050 365 aaKnown RBP21.3■■□□□ 1
PCNX1-209ENST00000554879 EXOC6Q8TAG9 804 aa21.3■■□□□ 1
PCNX1-209ENST00000554879 CLUAP1Q96AJ1 413 aa21.29■■□□□ 1
PCNX1-209ENST00000554879 DIP2BQ9P265 1576 aa21.28■■□□□ 1
PCNX1-209ENST00000554879 LTKP29376 864 aa21.28■■□□□ 1
PCNX1-209ENST00000554879 NLRP6P59044 892 aa21.27■■□□□ 1
PCNX1-209ENST00000554879 TRPM1Q7Z4N2 1603 aa21.27■■□□□ 1
PCNX1-209ENST00000554879 PSME1Q06323 249 aa21.27■■□□□ 1
PCNX1-209ENST00000554879 MYH16Q9H6N6 1097 aa21.26■□□□□ 0.99
PCNX1-209ENST00000554879 RIPK4P57078 832 aa21.26■□□□□ 0.99
PCNX1-209ENST00000554879 ERVK-7P63135 1459 aa21.26■□□□□ 0.99
PCNX1-209ENST00000554879 E9PSI1 815 aa21.26■□□□□ 0.99
PCNX1-209ENST00000554879 ELL2O00472 640 aaPredicted RBP21.26■□□□□ 0.99
PCNX1-209ENST00000554879 ESCO1Q5FWF5 840 aa21.25■□□□□ 0.99
PCNX1-209ENST00000554879 ASXL1Q8IXJ9 1541 aa21.25■□□□□ 0.99
PCNX1-209ENST00000554879 PIK3C2GO75747 1445 aa21.25■□□□□ 0.99
PCNX1-209ENST00000554879 MYOM2P54296 1465 aa21.25■□□□□ 0.99
PCNX1-209ENST00000554879 PROSER2Q86WR7 435 aaPredicted RBP21.25■□□□□ 0.99
PCNX1-209ENST00000554879 FYB1O15117 783 aa21.24■□□□□ 0.99
PCNX1-209ENST00000554879 ARHGAP31Q2M1Z3 1444 aa21.23■□□□□ 0.99
PCNX1-209ENST00000554879 ZRANB1Q9UGI0 708 aa21.22■□□□□ 0.99
PCNX1-209ENST00000554879 ZNF692Q9BU19 519 aaPredicted RBP21.22■□□□□ 0.99
PCNX1-209ENST00000554879 FRMPD1Q5SYB0 1578 aa21.21■□□□□ 0.99
PCNX1-209ENST00000554879 PLEKHH1Q9ULM0 1364 aa21.21■□□□□ 0.99
PCNX1-209ENST00000554879 PRKAR2BP31323 418 aa21.21■□□□□ 0.99
PCNX1-209ENST00000554879 XPCQ01831 940 aaPredicted RBP21.21■□□□□ 0.99
PCNX1-209ENST00000554879 ABTB2Q8N961 1025 aa21.21■□□□□ 0.99
PCNX1-209ENST00000554879 EMILIN1Q9Y6C2 1016 aa21.21■□□□□ 0.99
PCNX1-209ENST00000554879 ANKRD36BQ8N2N9 1353 aa21.21■□□□□ 0.99
PCNX1-209ENST00000554879 RGS3P49796 1198 aa21.21■□□□□ 0.99
PCNX1-209ENST00000554879 IPO9Q96P70 1041 aaKnown RBP21.21■□□□□ 0.99
PCNX1-209ENST00000554879 CRBNQ96SW2 442 aa21.2■□□□□ 0.98
PCNX1-209ENST00000554879 RTF1Q92541 710 aaKnown RBP21.2■□□□□ 0.98
PCNX1-209ENST00000554879 A0A1W2PP64 1363 aa21.2■□□□□ 0.98
PCNX1-209ENST00000554879 LMTK2Q8IWU2 1503 aa21.19■□□□□ 0.98
PCNX1-209ENST00000554879 SMC4Q9NTJ3 1288 aa21.19■□□□□ 0.98
PCNX1-209ENST00000554879 TMEM2Q9UHN6 1383 aa21.19■□□□□ 0.98
PCNX1-209ENST00000554879 MAP3K4Q9Y6R4 1608 aa21.19■□□□□ 0.98
PCNX1-209ENST00000554879 GLI2P10070 1586 aa21.18■□□□□ 0.98
PCNX1-209ENST00000554879 MADDQ8WXG6 1647 aa21.18■□□□□ 0.98
PCNX1-209ENST00000554879 SMG6Q86US8 1419 aaKnown RBP21.18■□□□□ 0.98
PCNX1-209ENST00000554879 METP08581 1390 aa21.18■□□□□ 0.98
PCNX1-209ENST00000554879 TCERG1O14776 1098 aaKnown RBP21.17■□□□□ 0.98
PCNX1-209ENST00000554879 LRPPRCP42704 1394 aaKnown RBP21.17■□□□□ 0.98
PCNX1-209ENST00000554879 RSPH6AQ9H0K4 717 aa21.16■□□□□ 0.98
PCNX1-209ENST00000554879 KCNA6P17658 529 aa21.16■□□□□ 0.98
PCNX1-209ENST00000554879 ACEP12821 1306 aa21.16■□□□□ 0.98
PCNX1-209ENST00000554879 CAMSAP1Q5T5Y3 1602 aa21.15■□□□□ 0.98
PCNX1-209ENST00000554879 TSR2Q969E8 191 aaKnown RBP21.15■□□□□ 0.98
PCNX1-209ENST00000554879 ZMYND15Q9H091 742 aa21.15■□□□□ 0.98
PCNX1-209ENST00000554879 HSP90AA2PQ14568 343 aaPredicted RBP21.14■□□□□ 0.97
PCNX1-209ENST00000554879 ADGRB3O60242 1522 aa21.14■□□□□ 0.97
PCNX1-209ENST00000554879 A0A0G2JS52 829 aa21.13■□□□□ 0.97
PCNX1-209ENST00000554879 PPIP5K1Q6PFW1 1433 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms