RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 MYOM1P52179 1685 aa19.8■□□□□ 0.76
SYNE3-203ENST00000554873 CLTCL1P53675 1640 aa19.79■□□□□ 0.76
SYNE3-203ENST00000554873 NKTRP30414 1462 aaKnown RBP19.79■□□□□ 0.76
SYNE3-203ENST00000554873 DMRT2Q9Y5R5 561 aa19.79■□□□□ 0.76
SYNE3-203ENST00000554873 CEP152O94986 1710 aa19.79■□□□□ 0.76
SYNE3-203ENST00000554873 MAPK8IP3Q9UPT6 1336 aa19.78■□□□□ 0.76
SYNE3-203ENST00000554873 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.78■□□□□ 0.76
SYNE3-203ENST00000554873 EIF3AQ14152 1382 aaKnown RBP19.78■□□□□ 0.76
SYNE3-203ENST00000554873 E9PSI1 815 aa19.77■□□□□ 0.76
SYNE3-203ENST00000554873 CARD14Q9BXL6 1004 aa19.77■□□□□ 0.76
SYNE3-203ENST00000554873 UPF2Q9HAU5 1272 aaKnown RBP19.77■□□□□ 0.76
SYNE3-203ENST00000554873 CHMP5Q9NZZ3 219 aa19.77■□□□□ 0.76
SYNE3-203ENST00000554873 DDX11L8A8MPP1 907 aa19.77■□□□□ 0.76
SYNE3-203ENST00000554873 CFAP70Q5T0N1 1121 aa19.76■□□□□ 0.75
SYNE3-203ENST00000554873 TBC1D32Q96NH3 1257 aa19.75■□□□□ 0.75
SYNE3-203ENST00000554873 RTEL1-TNFRSF6BF6WH68 1400 aa19.75■□□□□ 0.75
SYNE3-203ENST00000554873 MTERF4Q7Z6M4 381 aaKnown RBP19.75■□□□□ 0.75
SYNE3-203ENST00000554873 IGHDP01880 384 aa19.75■□□□□ 0.75
SYNE3-203ENST00000554873 ZSCAN30Q86W11 494 aa19.74■□□□□ 0.75
SYNE3-203ENST00000554873 FAM13BQ9NYF5 915 aa19.74■□□□□ 0.75
SYNE3-203ENST00000554873 KDM5AP29375 1690 aaKnown RBP19.73■□□□□ 0.75
SYNE3-203ENST00000554873 ZCCHC11Q5TAX3 1644 aaKnown RBP19.73■□□□□ 0.75
SYNE3-203ENST00000554873 ERVK-7P63135 1459 aa19.72■□□□□ 0.75
SYNE3-203ENST00000554873 ADGRF5Q8IZF2 1346 aa19.71■□□□□ 0.75
SYNE3-203ENST00000554873 CCDC173Q0VFZ6 552 aa19.71■□□□□ 0.75
SYNE3-203ENST00000554873 UTP14CQ5TAP6 766 aaKnown RBP19.71■□□□□ 0.75
SYNE3-203ENST00000554873 ZFYVE16Q7Z3T8 1539 aa19.71■□□□□ 0.75
SYNE3-203ENST00000554873 NGEFQ8N5V2 710 aa19.71■□□□□ 0.74
SYNE3-203ENST00000554873 KIAA1210Q9ULL0 1709 aa19.7■□□□□ 0.74
SYNE3-203ENST00000554873 PDE3AQ14432 1141 aa19.7■□□□□ 0.74
SYNE3-203ENST00000554873 TET3O43151 1660 aa19.7■□□□□ 0.74
SYNE3-203ENST00000554873 DEPDC5O75140 1603 aa19.69■□□□□ 0.74
SYNE3-203ENST00000554873 KIF3BO15066 747 aa19.69■□□□□ 0.74
SYNE3-203ENST00000554873 PPP1R9BQ96SB3 815 aa19.69■□□□□ 0.74
SYNE3-203ENST00000554873 KANK1Q14678 1352 aa19.69■□□□□ 0.74
SYNE3-203ENST00000554873 WWC1Q8IX03 1113 aa19.69■□□□□ 0.74
SYNE3-203ENST00000554873 SPRYD3Q8NCJ5 442 aa19.68■□□□□ 0.74
SYNE3-203ENST00000554873 CGNL1Q0VF96 1302 aa19.68■□□□□ 0.74
SYNE3-203ENST00000554873 MSNP26038 577 aaKnown RBP19.68■□□□□ 0.74
SYNE3-203ENST00000554873 GAS2L3Q86XJ1 694 aa19.68■□□□□ 0.74
SYNE3-203ENST00000554873 NCLP19338 710 aaKnown RBP19.67■□□□□ 0.74
SYNE3-203ENST00000554873 PANK1Q8TE04 598 aa19.67■□□□□ 0.74
SYNE3-203ENST00000554873 ZHX1Q9UKY1 873 aaPredicted RBP19.67■□□□□ 0.74
SYNE3-203ENST00000554873 COG6Q9Y2V7 657 aa19.66■□□□□ 0.74
SYNE3-203ENST00000554873 UHRF1BP1LA0JNW5 1464 aa19.66■□□□□ 0.74
SYNE3-203ENST00000554873 CLUAP1Q96AJ1 413 aa19.66■□□□□ 0.74
SYNE3-203ENST00000554873 POLR3AO14802 1390 aaPredicted RBP19.65■□□□□ 0.74
SYNE3-203ENST00000554873 VWDEQ8N2E2 1590 aa19.65■□□□□ 0.74
SYNE3-203ENST00000554873 DMTNQ08495 405 aa19.65■□□□□ 0.74
SYNE3-203ENST00000554873 UGGT1Q9NYU2 1555 aa19.65■□□□□ 0.74
SYNE3-203ENST00000554873 ZMYM3Q14202 1370 aa19.64■□□□□ 0.74
SYNE3-203ENST00000554873 MAP3K4Q9Y6R4 1608 aa19.64■□□□□ 0.74
SYNE3-203ENST00000554873 BBXQ8WY36 941 aaPredicted RBP19.64■□□□□ 0.73
SYNE3-203ENST00000554873 R3HCC1Q9Y3T6 440 aaKnown RBP19.64■□□□□ 0.73
SYNE3-203ENST00000554873 ABCA6Q8N139 1617 aa19.64■□□□□ 0.73
SYNE3-203ENST00000554873 CANXP27824 592 aaKnown RBP19.63■□□□□ 0.73
SYNE3-203ENST00000554873 MYOM2P54296 1465 aa19.63■□□□□ 0.73
SYNE3-203ENST00000554873 NEURL4Q96JN8 1562 aa19.62■□□□□ 0.73
SYNE3-203ENST00000554873 PDIA4P13667 645 aaKnown RBP19.62■□□□□ 0.73
SYNE3-203ENST00000554873 NEUROD2Q15784 382 aa19.62■□□□□ 0.73
SYNE3-203ENST00000554873 BCL11BQ9C0K0 894 aaPredicted RBP19.62■□□□□ 0.73
SYNE3-203ENST00000554873 UQCRHLA0A096LP55 91 aa19.61■□□□□ 0.73
SYNE3-203ENST00000554873 DYNC1I1O14576 645 aa19.61■□□□□ 0.73
SYNE3-203ENST00000554873 UQCRHP07919 91 aa19.61■□□□□ 0.73
SYNE3-203ENST00000554873 SKOR2Q2VWA4 1001 aaPredicted RBP19.61■□□□□ 0.73
SYNE3-203ENST00000554873 ANP32BQ92688 251 aaKnown RBP19.61■□□□□ 0.73
SYNE3-203ENST00000554873 ARAP3Q8WWN8 1544 aa19.61■□□□□ 0.73
SYNE3-203ENST00000554873 RRP7AQ9Y3A4 280 aaKnown RBP19.61■□□□□ 0.73
SYNE3-203ENST00000554873 NINLQ9Y2I6 1382 aa19.61■□□□□ 0.73
SYNE3-203ENST00000554873 ATP7AQ04656 1500 aa19.61■□□□□ 0.73
SYNE3-203ENST00000554873 TNNT2P45379 298 aaPredicted RBP19.61■□□□□ 0.73
SYNE3-203ENST00000554873 MORC1Q86VD1 984 aa19.6■□□□□ 0.73
SYNE3-203ENST00000554873 PRDM10Q9NQV6 1147 aa19.6■□□□□ 0.73
SYNE3-203ENST00000554873 RARSP54136 660 aaKnown RBP19.59■□□□□ 0.73
SYNE3-203ENST00000554873 PTMSP20962 102 aa19.59■□□□□ 0.73
SYNE3-203ENST00000554873 GTF2E1P29083 439 aaPredicted RBP19.59■□□□□ 0.73
SYNE3-203ENST00000554873 NASPP49321 788 aaPredicted RBP19.59■□□□□ 0.73
SYNE3-203ENST00000554873 ZNF692Q9BU19 519 aaPredicted RBP19.59■□□□□ 0.73
SYNE3-203ENST00000554873 RUNDC1Q96C34 613 aa19.58■□□□□ 0.73
SYNE3-203ENST00000554873 SLC12A5Q9H2X9 1139 aa19.58■□□□□ 0.73
SYNE3-203ENST00000554873 SBNO2Q9Y2G9 1366 aa19.58■□□□□ 0.73
SYNE3-203ENST00000554873 HS1BP3Q53T59 392 aa19.58■□□□□ 0.72
SYNE3-203ENST00000554873 TCP11L2Q8N4U5 519 aa19.58■□□□□ 0.72
SYNE3-203ENST00000554873 NSD3Q9BZ95 1437 aa19.57■□□□□ 0.72
SYNE3-203ENST00000554873 INO80Q9ULG1 1556 aaPredicted RBP19.57■□□□□ 0.72
SYNE3-203ENST00000554873 ZNF500O60304 480 aaPredicted RBP19.57■□□□□ 0.72
SYNE3-203ENST00000554873 KIF1BO60333 1816 aa19.56■□□□□ 0.72
SYNE3-203ENST00000554873 FANCAO15360 1455 aa19.56■□□□□ 0.72
SYNE3-203ENST00000554873 PHF23Q9BUL5 403 aaPredicted RBP19.56■□□□□ 0.72
SYNE3-203ENST00000554873 CCDC94Q9BW85 323 aaPredicted RBP19.56■□□□□ 0.72
SYNE3-203ENST00000554873 TRAK1Q9UPV9 953 aa19.56■□□□□ 0.72
SYNE3-203ENST00000554873 TNNQ9UQP3 1299 aa19.56■□□□□ 0.72
SYNE3-203ENST00000554873 PCDHB15Q9Y5E8 787 aa19.56■□□□□ 0.72
SYNE3-203ENST00000554873 MROH1Q8NDA8 1641 aa19.56■□□□□ 0.72
SYNE3-203ENST00000554873 RLBP1P12271 317 aa19.56■□□□□ 0.72
SYNE3-203ENST00000554873 ZSCAN20P17040 1043 aaPredicted RBP19.56■□□□□ 0.72
SYNE3-203ENST00000554873 NRXN1Q9ULB1 1477 aa19.55■□□□□ 0.72
SYNE3-203ENST00000554873 GBP4Q96PP9 640 aa19.55■□□□□ 0.72
SYNE3-203ENST00000554873 SHPRHQ149N8 1683 aa19.54■□□□□ 0.72
SYNE3-203ENST00000554873 MYO3AQ8NEV4 1616 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms