RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 KCTD12Q96CX2 325 aaKnown RBP10.46□□□□□ -0.73
FOXN3-206ENST00000554005 WBP1LQ9NX94 342 aa10.46□□□□□ -0.73
FOXN3-206ENST00000554005 MTMR2Q13614 643 aa10.45□□□□□ -0.74
FOXN3-206ENST00000554005 SLC27A5Q9Y2P5 690 aa10.44□□□□□ -0.74
FOXN3-206ENST00000554005 SPDYE5A6NIY4 337 aa10.43□□□□□ -0.74
FOXN3-206ENST00000554005 C6orf229H3BNL8 230 aa10.43□□□□□ -0.74
FOXN3-206ENST00000554005 ZMYND15Q9H091 742 aa10.43□□□□□ -0.74
FOXN3-206ENST00000554005 SNRKQ9NRH2 765 aa10.43□□□□□ -0.74
FOXN3-206ENST00000554005 AP1G2O75843 785 aa10.42□□□□□ -0.74
FOXN3-206ENST00000554005 SYMPKQ92797 1274 aaKnown RBP10.42□□□□□ -0.74
FOXN3-206ENST00000554005 PCDHB3Q9Y5E6 796 aa10.42□□□□□ -0.74
FOXN3-206ENST00000554005 CFAP99D6REC4 459 aa10.41□□□□□ -0.74
FOXN3-206ENST00000554005 UBTFP17480 764 aaKnown RBP10.4□□□□□ -0.74
FOXN3-206ENST00000554005 Q3C1V9 767 aa10.4□□□□□ -0.74
FOXN3-206ENST00000554005 BLOC1S3Q6QNY0 202 aa10.4□□□□□ -0.74
FOXN3-206ENST00000554005 USP17L8P0C7I0 530 aa10.39□□□□□ -0.75
FOXN3-206ENST00000554005 RNF19BQ6ZMZ0 732 aa10.39□□□□□ -0.75
FOXN3-206ENST00000554005 MTMR14Q8NCE2 650 aa10.39□□□□□ -0.75
FOXN3-206ENST00000554005 RETREG3Q86VR2 466 aa10.38□□□□□ -0.75
FOXN3-206ENST00000554005 SCUBE3Q8IX30 993 aa10.38□□□□□ -0.75
FOXN3-206ENST00000554005 CLUAP1Q96AJ1 413 aa10.38□□□□□ -0.75
FOXN3-206ENST00000554005 NR1I2O75469 434 aa10.37□□□□□ -0.75
FOXN3-206ENST00000554005 HELBQ8NG08 1087 aaPredicted RBP10.37□□□□□ -0.75
FOXN3-206ENST00000554005 PRR7Q8TB68 274 aa10.37□□□□□ -0.75
FOXN3-206ENST00000554005 SOCS7O14512 581 aa10.36□□□□□ -0.75
FOXN3-206ENST00000554005 CTDSPL2Q05D32 466 aa10.36□□□□□ -0.75
FOXN3-206ENST00000554005 BRICD5Q6PL45 260 aa10.36□□□□□ -0.75
FOXN3-206ENST00000554005 NYAP1Q6ZVC0 841 aa10.36□□□□□ -0.75
FOXN3-206ENST00000554005 TSC1Q92574 1164 aa10.36□□□□□ -0.75
FOXN3-206ENST00000554005 THAP11Q96EK4 314 aa10.36□□□□□ -0.75
FOXN3-206ENST00000554005 POM121Q96HA1 1249 aa10.36□□□□□ -0.75
FOXN3-206ENST00000554005 MYT1LQ9UL68 1186 aa10.36□□□□□ -0.75
FOXN3-206ENST00000554005 SALL2Q9Y467 1007 aaPredicted RBP10.36□□□□□ -0.75
FOXN3-206ENST00000554005 A6NJR5 290 aa10.35□□□□□ -0.75
FOXN3-206ENST00000554005 PTPN5P54829 565 aa10.35□□□□□ -0.75
FOXN3-206ENST00000554005 SUPT5HO00267 1087 aaKnown RBP10.34□□□□□ -0.75
FOXN3-206ENST00000554005 COPS2P61201 443 aa10.34□□□□□ -0.75
FOXN3-206ENST00000554005 FMNL1O95466 1100 aaPredicted RBP10.33□□□□□ -0.76
FOXN3-206ENST00000554005 USB1Q9BQ65 265 aaKnown RBP10.33□□□□□ -0.76
FOXN3-206ENST00000554005 COG6Q9Y2V7 657 aa10.33□□□□□ -0.76
FOXN3-206ENST00000554005 LRRN4Q8WUT4 740 aa10.32□□□□□ -0.76
FOXN3-206ENST00000554005 HMX1Q9NP08 348 aaPredicted RBP10.32□□□□□ -0.76
FOXN3-206ENST00000554005 RAD21O60216 631 aa10.31□□□□□ -0.76
FOXN3-206ENST00000554005 DESI1Q6ICB0 168 aa10.31□□□□□ -0.76
FOXN3-206ENST00000554005 GJD4Q96KN9 370 aaPredicted RBP10.31□□□□□ -0.76
FOXN3-206ENST00000554005 APBB1O00213 710 aa10.3□□□□□ -0.76
FOXN3-206ENST00000554005 PER1O15534 1290 aaPredicted RBP10.3□□□□□ -0.76
FOXN3-206ENST00000554005 MTRQ99707 1265 aa10.3□□□□□ -0.76
FOXN3-206ENST00000554005 PCDH10Q9P2E7 1040 aa10.3□□□□□ -0.76
FOXN3-206ENST00000554005 PROSER2Q86WR7 435 aaPredicted RBP10.29□□□□□ -0.76
FOXN3-206ENST00000554005 TLL1O43897 1013 aa10.28□□□□□ -0.76
FOXN3-206ENST00000554005 SPSB2Q99619 263 aa10.28□□□□□ -0.76
FOXN3-206ENST00000554005 TRIM34Q9BYJ4 488 aa10.28□□□□□ -0.76
FOXN3-206ENST00000554005 GDPD2Q9HCC8 539 aa10.28□□□□□ -0.76
FOXN3-206ENST00000554005 TRAK2O60296 914 aa10.27□□□□□ -0.77
FOXN3-206ENST00000554005 ZPR1O75312 459 aa10.27□□□□□ -0.77
FOXN3-206ENST00000554005 MSS51Q4VC12 460 aa10.27□□□□□ -0.77
FOXN3-206ENST00000554005 TJAP1Q5JTD0 557 aa10.27□□□□□ -0.77
FOXN3-206ENST00000554005 LYPD8Q6UX82 237 aa10.27□□□□□ -0.77
FOXN3-206ENST00000554005 FNBP4Q8N3X1 1017 aaPredicted RBP10.27□□□□□ -0.77
FOXN3-206ENST00000554005 TBC1D2BQ9UPU7 963 aa10.27□□□□□ -0.77
FOXN3-206ENST00000554005 SPNS2Q8IVW8 549 aa10.26□□□□□ -0.77
FOXN3-206ENST00000554005 FAM160A2Q8N612 972 aaPredicted RBP10.26□□□□□ -0.77
FOXN3-206ENST00000554005 JUNDP17535 347 aa10.25□□□□□ -0.77
FOXN3-206ENST00000554005 ZNF516Q92618 1163 aa10.25□□□□□ -0.77
FOXN3-206ENST00000554005 IL21Q9HBE4 155 aa10.25□□□□□ -0.77
FOXN3-206ENST00000554005 NDUFB9Q9Y6M9 179 aa10.25□□□□□ -0.77
FOXN3-206ENST00000554005 GPR37L1O60883 481 aa10.24□□□□□ -0.77
FOXN3-206ENST00000554005 ADH1BP00325 375 aa10.24□□□□□ -0.77
FOXN3-206ENST00000554005 EPS8L1Q8TE68 723 aa10.24□□□□□ -0.77
FOXN3-206ENST00000554005 RNF166Q96A37 237 aaPredicted RBP10.24□□□□□ -0.77
FOXN3-206ENST00000554005 PRM3Q9NNZ6 103 aa10.24□□□□□ -0.77
FOXN3-206ENST00000554005 PRDM9Q9NQV7 894 aa10.24□□□□□ -0.77
FOXN3-206ENST00000554005 DXOO77932 396 aaKnown RBP10.23□□□□□ -0.77
FOXN3-206ENST00000554005 ABL2P42684 1182 aa10.23□□□□□ -0.77
FOXN3-206ENST00000554005 MMP16P51512 607 aa10.22□□□□□ -0.77
FOXN3-206ENST00000554005 NR6A1Q15406 480 aa10.22□□□□□ -0.77
FOXN3-206ENST00000554005 PTPRNQ16849 979 aa10.22□□□□□ -0.77
FOXN3-206ENST00000554005 C1orf115Q9H7X2 142 aa10.22□□□□□ -0.77
FOXN3-206ENST00000554005 ARID3CA6NKF2 412 aa10.21□□□□□ -0.77
FOXN3-206ENST00000554005 HCSTQ9UBK5 93 aa10.21□□□□□ -0.77
FOXN3-206ENST00000554005 F12P00748 615 aaPredicted RBP10.2□□□□□ -0.78
FOXN3-206ENST00000554005 IRF5Q13568 498 aa10.19□□□□□ -0.78
FOXN3-206ENST00000554005 CCNYL3P0C7X3 344 aa10.18□□□□□ -0.78
FOXN3-206ENST00000554005 NKX2-3Q8TAU0 364 aa10.18□□□□□ -0.78
FOXN3-206ENST00000554005 MAP10Q9P2G4 905 aa10.18□□□□□ -0.78
FOXN3-206ENST00000554005 WWC1Q8IX03 1113 aa10.17□□□□□ -0.78
FOXN3-206ENST00000554005 NUDT12Q9BQG2 462 aa10.17□□□□□ -0.78
FOXN3-206ENST00000554005 SLC6A16Q9GZN6 736 aa10.17□□□□□ -0.78
FOXN3-206ENST00000554005 ZNF777Q9ULD5 760 aaPredicted RBP10.17□□□□□ -0.78
FOXN3-206ENST00000554005 ZNF330Q9Y3S2 320 aaPredicted RBP10.17□□□□□ -0.78
FOXN3-206ENST00000554005 ITGBL1O95965 494 aaPredicted RBP10.15□□□□□ -0.78
FOXN3-206ENST00000554005 EVA1BQ9NVM1 165 aa10.15□□□□□ -0.78
FOXN3-206ENST00000554005 S1PR4O95977 384 aa10.14□□□□□ -0.79
FOXN3-206ENST00000554005 CTHP32929 405 aa10.14□□□□□ -0.79
FOXN3-206ENST00000554005 POM121CA8CG34 1229 aa10.13□□□□□ -0.79
FOXN3-206ENST00000554005 KCNH2Q12809 1159 aa10.13□□□□□ -0.79
FOXN3-206ENST00000554005 KCNC4Q03721 635 aa10.12□□□□□ -0.79
FOXN3-206ENST00000554005 PNMA1Q8ND90 353 aa10.12□□□□□ -0.79
FOXN3-206ENST00000554005 FKBPLQ9UIM3 349 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms