RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 ABCC11Q96J66 1382 aa30.12■■■□□ 2.41
HIF1A-206ENST00000553999 NHSL1Q5SYE7 1610 aa30.11■■■□□ 2.41
HIF1A-206ENST00000553999 NUTM2BA6NNL0 878 aaPredicted RBP30.11■■■□□ 2.41
HIF1A-206ENST00000553999 NUTM2EB1AL46 878 aaPredicted RBP30.11■■■□□ 2.41
HIF1A-206ENST00000553999 NUTM2AQ8IVF1 878 aaPredicted RBP30.11■■■□□ 2.41
HIF1A-206ENST00000553999 RGS17Q9UGC6 210 aaPredicted RBP30.1■■■□□ 2.41
HIF1A-206ENST00000553999 DHX57Q6P158 1386 aaKnown RBP30.1■■■□□ 2.41
HIF1A-206ENST00000553999 LRP6O75581 1613 aa30.1■■■□□ 2.41
HIF1A-206ENST00000553999 CDC42BPGQ6DT37 1551 aa30.09■■■□□ 2.41
HIF1A-206ENST00000553999 MEX3CQ5U5Q3 659 aaKnown RBP30.08■■■□□ 2.41
HIF1A-206ENST00000553999 SOCS7O14512 581 aa30.07■■■□□ 2.4
HIF1A-206ENST00000553999 ESCO1Q5FWF5 840 aa30.06■■■□□ 2.4
HIF1A-206ENST00000553999 PRAM1Q96QH2 718 aa30.05■■■□□ 2.4
HIF1A-206ENST00000553999 SHPRHQ149N8 1683 aa30.04■■■□□ 2.4
HIF1A-206ENST00000553999 TRAK1Q9UPV9 953 aa30.04■■■□□ 2.4
HIF1A-206ENST00000553999 XPCQ01831 940 aaPredicted RBP30.03■■■□□ 2.4
HIF1A-206ENST00000553999 ADGRB1O14514 1584 aa30.02■■■□□ 2.4
HIF1A-206ENST00000553999 SPATA31A6Q5VVP1 1343 aa30.01■■■□□ 2.4
HIF1A-206ENST00000553999 POGKQ9P215 609 aa30.01■■■□□ 2.39
HIF1A-206ENST00000553999 POTEAQ6S8J7 498 aa29.99■■■□□ 2.39
HIF1A-206ENST00000553999 LRRC59Q96AG4 307 aaKnown RBP29.98■■■□□ 2.39
HIF1A-206ENST00000553999 FMN2Q9NZ56 1722 aa29.97■■■□□ 2.39
HIF1A-206ENST00000553999 HIRIP3Q9BW71 556 aaPredicted RBP29.97■■■□□ 2.39
HIF1A-206ENST00000553999 PNPLA6Q8IY17 1366 aa29.97■■■□□ 2.39
HIF1A-206ENST00000553999 SIN3AQ96ST3 1273 aa29.96■■■□□ 2.39
HIF1A-206ENST00000553999 FOXO3O43524 673 aa29.95■■■□□ 2.39
HIF1A-206ENST00000553999 MINK1Q8N4C8 1332 aaPredicted RBP29.95■■■□□ 2.38
HIF1A-206ENST00000553999 NEUROD1Q13562 356 aa29.94■■■□□ 2.38
HIF1A-206ENST00000553999 DLC1Q96QB1 1528 aa29.92■■■□□ 2.38
HIF1A-206ENST00000553999 SIRT1Q96EB6 747 aa29.91■■■□□ 2.38
HIF1A-206ENST00000553999 SOS2Q07890 1332 aaPredicted RBP29.91■■■□□ 2.38
HIF1A-206ENST00000553999 NPHP3Q7Z494 1330 aa29.89■■■□□ 2.38
HIF1A-206ENST00000553999 ADAMTS2O95450 1211 aa29.88■■■□□ 2.37
HIF1A-206ENST00000553999 PLEKHG5O94827 1062 aa29.87■■■□□ 2.37
HIF1A-206ENST00000553999 RGPD8O14715 1765 aaPredicted RBP29.87■■■□□ 2.37
HIF1A-206ENST00000553999 C8orf37Q96NL8 207 aa29.86■■■□□ 2.37
HIF1A-206ENST00000553999 PXDNQ92626 1479 aa29.86■■■□□ 2.37
HIF1A-206ENST00000553999 STAC3Q96MF2 364 aa29.85■■■□□ 2.37
HIF1A-206ENST00000553999 NBPF1Q3BBV0 1214 aa29.84■■■□□ 2.37
HIF1A-206ENST00000553999 ARHGEF28Q8N1W1 1705 aaKnown RBP29.83■■■□□ 2.37
HIF1A-206ENST00000553999 L3MBTL2Q969R5 705 aa29.83■■■□□ 2.37
HIF1A-206ENST00000553999 AFF2P51816 1311 aa29.82■■■□□ 2.36
HIF1A-206ENST00000553999 TRIM26Q12899 539 aaPredicted RBP29.82■■■□□ 2.36
HIF1A-206ENST00000553999 PMFBP1Q8TBY8 1022 aa29.82■■■□□ 2.36
HIF1A-206ENST00000553999 PHF8Q9UPP1 1060 aa29.81■■■□□ 2.36
HIF1A-206ENST00000553999 KIF1AQ12756 1690 aa29.81■■■□□ 2.36
HIF1A-206ENST00000553999 USP32Q8NFA0 1604 aa29.8■■■□□ 2.36
HIF1A-206ENST00000553999 ADGRB2O60241 1585 aa29.8■■■□□ 2.36
HIF1A-206ENST00000553999 ZNF772Q68DY9 489 aaPredicted RBP29.77■■■□□ 2.36
HIF1A-206ENST00000553999 KRT28Q7Z3Y7 464 aa29.77■■■□□ 2.36
HIF1A-206ENST00000553999 PRR36Q9H6K5 1346 aa29.75■■■□□ 2.35
HIF1A-206ENST00000553999 LMOD2Q6P5Q4 547 aa29.74■■■□□ 2.35
HIF1A-206ENST00000553999 NGLY1Q96IV0 654 aa29.74■■■□□ 2.35
HIF1A-206ENST00000553999 KIAA1210Q9ULL0 1709 aa29.74■■■□□ 2.35
HIF1A-206ENST00000553999 WASLO00401 505 aaPredicted RBP29.73■■■□□ 2.35
HIF1A-206ENST00000553999 ANKARQ7Z5J8 1434 aa29.71■■■□□ 2.35
HIF1A-206ENST00000553999 TULP4Q9NRJ4 1543 aa29.71■■■□□ 2.35
HIF1A-206ENST00000553999 COL22A1Q8NFW1 1626 aaPredicted RBP29.71■■■□□ 2.35
HIF1A-206ENST00000553999 PSME1Q06323 249 aa29.7■■■□□ 2.35
HIF1A-206ENST00000553999 SPATA31A3Q5VYP0 1347 aa29.7■■■□□ 2.34
HIF1A-206ENST00000553999 EIF3AQ14152 1382 aaKnown RBP29.66■■■□□ 2.34
HIF1A-206ENST00000553999 TNS3Q68CZ2 1445 aa29.66■■■□□ 2.34
HIF1A-206ENST00000553999 CABLES1Q8TDN4 633 aa29.66■■■□□ 2.34
HIF1A-206ENST00000553999 HAP1P54257 671 aaPredicted RBP29.65■■■□□ 2.34
HIF1A-206ENST00000553999 RXRBP28702 533 aa29.64■■■□□ 2.34
HIF1A-206ENST00000553999 CDK19Q9BWU1 502 aa29.64■■■□□ 2.34
HIF1A-206ENST00000553999 QTRT2Q9H974 415 aaKnown RBP29.63■■■□□ 2.33
HIF1A-206ENST00000553999 ATP7BP35670 1465 aa29.62■■■□□ 2.33
HIF1A-206ENST00000553999 NGDNQ8NEJ9 315 aaKnown RBP29.62■■■□□ 2.33
HIF1A-206ENST00000553999 NUDT16Q96DE0 195 aaKnown RBP29.62■■■□□ 2.33
HIF1A-206ENST00000553999 USP21Q9UK80 565 aa29.62■■■□□ 2.33
HIF1A-206ENST00000553999 TRPM1Q7Z4N2 1603 aa29.62■■■□□ 2.33
HIF1A-206ENST00000553999 CENPJQ9HC77 1338 aaPredicted RBP29.61■■■□□ 2.33
HIF1A-206ENST00000553999 ROCK2O75116 1388 aaKnown RBP29.61■■■□□ 2.33
HIF1A-206ENST00000553999 NBPF8Q3BBV2 869 aa29.59■■■□□ 2.33
HIF1A-206ENST00000553999 GPRASP1Q5JY77 1395 aa29.59■■■□□ 2.33
HIF1A-206ENST00000553999 PAK3O75914 559 aaPredicted RBP29.58■■■□□ 2.33
HIF1A-206ENST00000553999 TONSLQ96HA7 1378 aa29.58■■■□□ 2.33
HIF1A-206ENST00000553999 QRICH2Q9H0J4 1663 aa29.58■■■□□ 2.33
HIF1A-206ENST00000553999 SBNO1A3KN83 1393 aa29.57■■■□□ 2.32
HIF1A-206ENST00000553999 SRPK2P78362 688 aaKnown RBP29.57■■■□□ 2.32
HIF1A-206ENST00000553999 ITSN1Q15811 1721 aa29.55■■■□□ 2.32
HIF1A-206ENST00000553999 TRPM3Q9HCF6 1732 aaPredicted RBP29.55■■■□□ 2.32
HIF1A-206ENST00000553999 MARF1Q9Y4F3 1742 aaKnown RBP29.55■■■□□ 2.32
HIF1A-206ENST00000553999 CABP2Q9NPB3 220 aa29.55■■■□□ 2.32
HIF1A-206ENST00000553999 ARHGEF10O15013 1369 aa29.52■■■□□ 2.32
HIF1A-206ENST00000553999 RGS12O14924 1447 aa29.52■■■□□ 2.32
HIF1A-206ENST00000553999 ABCA3Q99758 1704 aa29.51■■■□□ 2.32
HIF1A-206ENST00000553999 RBM6P78332 1123 aaKnown RBP29.51■■■□□ 2.31
HIF1A-206ENST00000553999 FNBP4Q8N3X1 1017 aaPredicted RBP29.51■■■□□ 2.31
HIF1A-206ENST00000553999 TOPAZ1Q8N9V7 1692 aa29.5■■■□□ 2.31
HIF1A-206ENST00000553999 NUTM2GQ5VZR2 741 aa29.49■■■□□ 2.31
HIF1A-206ENST00000553999 TRPC5Q9UL62 973 aaPredicted RBP29.49■■■□□ 2.31
HIF1A-206ENST00000553999 ACEP12821 1306 aa29.47■■■□□ 2.31
HIF1A-206ENST00000553999 ALS2Q96Q42 1657 aa29.47■■■□□ 2.31
HIF1A-206ENST00000553999 BCL9LQ86UU0 1499 aa29.47■■■□□ 2.31
HIF1A-206ENST00000553999 ATRNO75882 1429 aa29.46■■■□□ 2.31
HIF1A-206ENST00000553999 CCDC61Q9Y6R9 512 aa29.46■■■□□ 2.31
HIF1A-206ENST00000553999 PPIP5K1Q6PFW1 1433 aa29.45■■■□□ 2.31
HIF1A-206ENST00000553999 PCGF6Q9BYE7 350 aa29.45■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms