RNA–Protein interactions for RNA: ENST00000553993.1

TRAV32-201, Transcript of T cell receptor alpha variable 32 (pseudogene), humanhuman

BASIC

Gene TRAV32, Length 340 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV32-201ENST00000553993 SLC6A16Q9GZN6 736 aa6.1□□□□□ -1.43
TRAV32-201ENST00000553993 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.1□□□□□ -1.43
TRAV32-201ENST00000553993 SPTLC1O15269 473 aa6.09□□□□□ -1.43
TRAV32-201ENST00000553993 S1PR4O95977 384 aa6.09□□□□□ -1.43
TRAV32-201ENST00000553993 GJA5P36382 358 aa6.09□□□□□ -1.43
TRAV32-201ENST00000553993 RIC3Q7Z5B4 369 aa6.09□□□□□ -1.43
TRAV32-201ENST00000553993 USB1Q9BQ65 265 aaKnown RBP6.09□□□□□ -1.43
TRAV32-201ENST00000553993 ATP1B4Q9UN42 357 aaPredicted RBP6.09□□□□□ -1.43
TRAV32-201ENST00000553993 CLK2P49760 499 aaKnown RBP6.08□□□□□ -1.44
TRAV32-201ENST00000553993 CSPP1Q1MSJ5 1256 aa6.08□□□□□ -1.44
TRAV32-201ENST00000553993 MSS51Q4VC12 460 aa6.08□□□□□ -1.44
TRAV32-201ENST00000553993 RETREG3Q86VR2 466 aa6.08□□□□□ -1.44
TRAV32-201ENST00000553993 PCDHGC3Q9UN70 934 aa6.08□□□□□ -1.44
TRAV32-201ENST00000553993 PLEKHG3A1L390 1219 aa6.07□□□□□ -1.44
TRAV32-201ENST00000553993 SPDYE5A6NIY4 337 aa6.07□□□□□ -1.44
TRAV32-201ENST00000553993 MTMR2Q13614 643 aa6.07□□□□□ -1.44
TRAV32-201ENST00000553993 LAPTM4AQ15012 233 aa6.07□□□□□ -1.44
TRAV32-201ENST00000553993 SH3D19Q5HYK7 790 aa6.07□□□□□ -1.44
TRAV32-201ENST00000553993 IL27Q8NEV9 243 aa6.07□□□□□ -1.44
TRAV32-201ENST00000553993 SYMPKQ92797 1274 aaKnown RBP6.07□□□□□ -1.44
TRAV32-201ENST00000553993 POLR3EQ9NVU0 708 aa6.07□□□□□ -1.44
TRAV32-201ENST00000553993 RNF223E7ERA6 249 aa6.06□□□□□ -1.44
TRAV32-201ENST00000553993 FAM160A2Q8N612 972 aaPredicted RBP6.06□□□□□ -1.44
TRAV32-201ENST00000553993 ZBTB3Q9H5J0 574 aa6.06□□□□□ -1.44
TRAV32-201ENST00000553993 PRDM9Q9NQV7 894 aa6.06□□□□□ -1.44
TRAV32-201ENST00000553993 LIMD1Q9UGP4 676 aa6.06□□□□□ -1.44
TRAV32-201ENST00000553993 PCDHB15Q9Y5E8 787 aa6.06□□□□□ -1.44
TRAV32-201ENST00000553993 NUTM2BA6NNL0 878 aaPredicted RBP6.05□□□□□ -1.44
TRAV32-201ENST00000553993 NUTM2EB1AL46 878 aaPredicted RBP6.05□□□□□ -1.44
TRAV32-201ENST00000553993 SKIV2LQ15477 1246 aaKnown RBP6.05□□□□□ -1.44
TRAV32-201ENST00000553993 NUTM2DQ5VT03 806 aaPredicted RBP6.05□□□□□ -1.44
TRAV32-201ENST00000553993 PRPF38BQ5VTL8 546 aaKnown RBP6.05□□□□□ -1.44
TRAV32-201ENST00000553993 NUTM2AQ8IVF1 878 aaPredicted RBP6.05□□□□□ -1.44
TRAV32-201ENST00000553993 ANKLE1Q8NAG6 615 aa6.05□□□□□ -1.44
TRAV32-201ENST00000553993 PPEF1O14829 653 aaPredicted RBP6.04□□□□□ -1.44
TRAV32-201ENST00000553993 HRCP23327 699 aa6.04□□□□□ -1.44
TRAV32-201ENST00000553993 TUSC1Q2TAM9 212 aa6.04□□□□□ -1.44
TRAV32-201ENST00000553993 CABLES1Q8TDN4 633 aa6.04□□□□□ -1.44
TRAV32-201ENST00000553993 FCF1Q9Y324 198 aaKnown RBP6.04□□□□□ -1.44
TRAV32-201ENST00000553993 DXOO77932 396 aaKnown RBP6.03□□□□□ -1.44
TRAV32-201ENST00000553993 JUNDP17535 347 aa6.03□□□□□ -1.44
TRAV32-201ENST00000553993 MMP16P51512 607 aa6.03□□□□□ -1.44
TRAV32-201ENST00000553993 PRR7Q8TB68 274 aa6.03□□□□□ -1.44
TRAV32-201ENST00000553993 PCMTD1Q96MG8 357 aaPredicted RBP6.03□□□□□ -1.44
TRAV32-201ENST00000553993 QPCTQ16769 361 aa6.02□□□□□ -1.45
TRAV32-201ENST00000553993 TSC1Q92574 1164 aa6.02□□□□□ -1.45
TRAV32-201ENST00000553993 PRKD2Q9BZL6 878 aa6.02□□□□□ -1.45
TRAV32-201ENST00000553993 LILRB3O75022 631 aa6.01□□□□□ -1.45
TRAV32-201ENST00000553993 CCDC24Q8N4L8 307 aa6.01□□□□□ -1.45
TRAV32-201ENST00000553993 PROCA1Q8NCQ7 364 aaPredicted RBP6.01□□□□□ -1.45
TRAV32-201ENST00000553993 GOPCQ9HD26 462 aa6.01□□□□□ -1.45
TRAV32-201ENST00000553993 CFAP99D6REC4 459 aa6□□□□□ -1.45
TRAV32-201ENST00000553993 DESI1Q6ICB0 168 aa6□□□□□ -1.45
TRAV32-201ENST00000553993 HELBQ8NG08 1087 aaPredicted RBP6□□□□□ -1.45
TRAV32-201ENST00000553993 NUDT12Q9BQG2 462 aa6□□□□□ -1.45
TRAV32-201ENST00000553993 V9GY48 417 aaPredicted RBP6□□□□□ -1.45
TRAV32-201ENST00000553993 ZBTB24O43167 697 aaPredicted RBP5.99□□□□□ -1.45
TRAV32-201ENST00000553993 SLC19A1P41440 591 aa5.99□□□□□ -1.45
TRAV32-201ENST00000553993 PTPRNQ16849 979 aa5.99□□□□□ -1.45
TRAV32-201ENST00000553993 RTL5Q5HYW3 569 aaPredicted RBP5.99□□□□□ -1.45
TRAV32-201ENST00000553993 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.99□□□□□ -1.45
TRAV32-201ENST00000553993 CCNYL3P0C7X3 344 aa5.98□□□□□ -1.45
TRAV32-201ENST00000553993 PLA2G2CQ5R387 149 aa5.98□□□□□ -1.45
TRAV32-201ENST00000553993 Q6ZNB5 142 aa5.98□□□□□ -1.45
TRAV32-201ENST00000553993 RPIAP49247 311 aa5.97□□□□□ -1.45
TRAV32-201ENST00000553993 PPP2R2DQ66LE6 453 aa5.97□□□□□ -1.45
TRAV32-201ENST00000553993 LYPD8Q6UX82 237 aa5.97□□□□□ -1.45
TRAV32-201ENST00000553993 LIAT1Q6ZQX7 453 aa5.97□□□□□ -1.45
TRAV32-201ENST00000553993 CD2BP2O95400 341 aaKnown RBP5.96□□□□□ -1.46
TRAV32-201ENST00000553993 CTHP32929 405 aa5.96□□□□□ -1.46
TRAV32-201ENST00000553993 AP1G2O75843 785 aa5.95□□□□□ -1.46
TRAV32-201ENST00000553993 RFC5P40937 340 aa5.95□□□□□ -1.46
TRAV32-201ENST00000553993 SPRYD7Q5W111 196 aa5.95□□□□□ -1.46
TRAV32-201ENST00000553993 EMID1Q96A84 441 aaPredicted RBP5.95□□□□□ -1.46
TRAV32-201ENST00000553993 EVA1BQ9NVM1 165 aa5.95□□□□□ -1.46
TRAV32-201ENST00000553993 PER1O15534 1290 aaPredicted RBP5.94□□□□□ -1.46
TRAV32-201ENST00000553993 KCNH2Q12809 1159 aa5.94□□□□□ -1.46
TRAV32-201ENST00000553993 TRIM32Q13049 653 aa5.94□□□□□ -1.46
TRAV32-201ENST00000553993 ZNF697Q5TEC3 545 aa5.94□□□□□ -1.46
TRAV32-201ENST00000553993 ZNF598Q86UK7 904 aaKnown RBP5.94□□□□□ -1.46
TRAV32-201ENST00000553993 NRG2O14511 850 aaPredicted RBP5.93□□□□□ -1.46
TRAV32-201ENST00000553993 CTDSPL2Q05D32 466 aa5.93□□□□□ -1.46
TRAV32-201ENST00000553993 FBXO31Q5XUX0 539 aaPredicted RBP5.93□□□□□ -1.46
TRAV32-201ENST00000553993 TRAF7Q6Q0C0 670 aa5.93□□□□□ -1.46
TRAV32-201ENST00000553993 UNC93B1Q9H1C4 597 aa5.93□□□□□ -1.46
TRAV32-201ENST00000553993 MAP10Q9P2G4 905 aa5.93□□□□□ -1.46
TRAV32-201ENST00000553993 GFRA3O60609 400 aa5.92□□□□□ -1.46
TRAV32-201ENST00000553993 F12P00748 615 aaPredicted RBP5.92□□□□□ -1.46
TRAV32-201ENST00000553993 TMEM259Q4ZIN3 620 aa5.92□□□□□ -1.46
TRAV32-201ENST00000553993 PTCRAQ6ISU1 281 aaPredicted RBP5.92□□□□□ -1.46
TRAV32-201ENST00000553993 USP17L8P0C7I0 530 aa5.91□□□□□ -1.46
TRAV32-201ENST00000553993 LRRN4Q8WUT4 740 aa5.91□□□□□ -1.46
TRAV32-201ENST00000553993 WNT7BP56706 349 aa5.9□□□□□ -1.46
TRAV32-201ENST00000553993 FOXC1Q12948 553 aa5.9□□□□□ -1.46
TRAV32-201ENST00000553993 LINC01559Q495D7 138 aa5.9□□□□□ -1.46
TRAV32-201ENST00000553993 PDZRN3Q9UPQ7 1066 aa5.9□□□□□ -1.46
TRAV32-201ENST00000553993 TNFRSF10AO00220 468 aa5.89□□□□□ -1.47
TRAV32-201ENST00000553993 TMEM132AQ24JP5 1023 aa5.89□□□□□ -1.47
TRAV32-201ENST00000553993 ARMC2Q8NEN0 867 aa5.89□□□□□ -1.47
TRAV32-201ENST00000553993 NBPF14Q5TI25 921 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms