RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 KIAA1210Q9ULL0 1709 aa13.37□□□□□ -0.27
CHD8-206ENST00000553870 CCER1Q8TC90 406 aaPredicted RBP13.36□□□□□ -0.27
CHD8-206ENST00000553870 PRAM1Q96QH2 718 aa13.36□□□□□ -0.27
CHD8-206ENST00000553870 TRAK1Q9UPV9 953 aa13.36□□□□□ -0.27
CHD8-206ENST00000553870 NBPF1Q3BBV0 1214 aa13.35□□□□□ -0.27
CHD8-206ENST00000553870 HSPA1LP34931 641 aa13.34□□□□□ -0.27
CHD8-206ENST00000553870 PLEKHH1Q9ULM0 1364 aa13.33□□□□□ -0.27
CHD8-206ENST00000553870 MST1RQ04912 1400 aa13.32□□□□□ -0.28
CHD8-206ENST00000553870 NBPF8Q3BBV2 869 aa13.32□□□□□ -0.28
CHD8-206ENST00000553870 BRINP3Q76B58 766 aa13.31□□□□□ -0.28
CHD8-206ENST00000553870 ROCK2O75116 1388 aaKnown RBP13.31□□□□□ -0.28
CHD8-206ENST00000553870 NALCNQ8IZF0 1738 aa13.3□□□□□ -0.28
CHD8-206ENST00000553870 C1orf167Q5SNV9 1468 aa13.3□□□□□ -0.28
CHD8-206ENST00000553870 CDC42BPGQ6DT37 1551 aa13.3□□□□□ -0.28
CHD8-206ENST00000553870 GPRASP1Q5JY77 1395 aa13.3□□□□□ -0.28
CHD8-206ENST00000553870 ROBO1Q9Y6N7 1651 aa13.29□□□□□ -0.28
CHD8-206ENST00000553870 SAFB2Q14151 953 aaKnown RBP eCLIP13.29□□□□□ -0.28
CHD8-206ENST00000553870 EIF3AQ14152 1382 aaKnown RBP13.29□□□□□ -0.28
CHD8-206ENST00000553870 WASLO00401 505 aaPredicted RBP13.28□□□□□ -0.28
CHD8-206ENST00000553870 TRPM1Q7Z4N2 1603 aa13.28□□□□□ -0.28
CHD8-206ENST00000553870 ESCO1Q5FWF5 840 aa13.27□□□□□ -0.29
CHD8-206ENST00000553870 CARD11Q9BXL7 1154 aa13.27□□□□□ -0.29
CHD8-206ENST00000553870 MINK1Q8N4C8 1332 aaPredicted RBP13.27□□□□□ -0.29
CHD8-206ENST00000553870 CENPJQ9HC77 1338 aaPredicted RBP13.27□□□□□ -0.29
CHD8-206ENST00000553870 ORAI2Q96SN7 254 aa13.26□□□□□ -0.29
CHD8-206ENST00000553870 ADGRB2O60241 1585 aa13.25□□□□□ -0.29
CHD8-206ENST00000553870 RALGAPBQ86X10 1494 aa13.25□□□□□ -0.29
CHD8-206ENST00000553870 ANKARQ7Z5J8 1434 aa13.25□□□□□ -0.29
CHD8-206ENST00000553870 SLC24A1O60721 1099 aa13.25□□□□□ -0.29
CHD8-206ENST00000553870 LRRC59Q96AG4 307 aaKnown RBP13.25□□□□□ -0.29
CHD8-206ENST00000553870 AHDC1Q5TGY3 1603 aaPredicted RBP13.24□□□□□ -0.29
CHD8-206ENST00000553870 NPHP3Q7Z494 1330 aa13.24□□□□□ -0.29
CHD8-206ENST00000553870 HIRIP3Q9BW71 556 aaPredicted RBP13.24□□□□□ -0.29
CHD8-206ENST00000553870 ARHGEF28Q8N1W1 1705 aaKnown RBP13.24□□□□□ -0.29
CHD8-206ENST00000553870 SOS2Q07890 1332 aaPredicted RBP13.23□□□□□ -0.29
CHD8-206ENST00000553870 NUTM2FA1L443 756 aa13.23□□□□□ -0.29
CHD8-206ENST00000553870 CDK19Q9BWU1 502 aa13.23□□□□□ -0.29
CHD8-206ENST00000553870 PHF8Q9UPP1 1060 aa13.23□□□□□ -0.29
CHD8-206ENST00000553870 FMN2Q9NZ56 1722 aa13.22□□□□□ -0.29
CHD8-206ENST00000553870 JCADQ9P266 1359 aa13.22□□□□□ -0.29
CHD8-206ENST00000553870 FOXO3O43524 673 aa13.21□□□□□ -0.29
CHD8-206ENST00000553870 NUDT16Q96DE0 195 aaKnown RBP13.21□□□□□ -0.29
CHD8-206ENST00000553870 CCDC61Q9Y6R9 512 aa13.21□□□□□ -0.29
CHD8-206ENST00000553870 PHLPP1O60346 1717 aa13.21□□□□□ -0.3
CHD8-206ENST00000553870 EVC2Q86UK5 1308 aa13.2□□□□□ -0.3
CHD8-206ENST00000553870 PSME1Q06323 249 aa13.2□□□□□ -0.3
CHD8-206ENST00000553870 SBNO2Q9Y2G9 1366 aa13.2□□□□□ -0.3
CHD8-206ENST00000553870 TULP4Q9NRJ4 1543 aa13.19□□□□□ -0.3
CHD8-206ENST00000553870 SPATA31A6Q5VVP1 1343 aa13.19□□□□□ -0.3
CHD8-206ENST00000553870 NHSL1Q5SYE7 1610 aa13.19□□□□□ -0.3
CHD8-206ENST00000553870 PRR36Q9H6K5 1346 aa13.18□□□□□ -0.3
CHD8-206ENST00000553870 COL16A1Q07092 1604 aaPredicted RBP13.18□□□□□ -0.3
CHD8-206ENST00000553870 PLEKHG3A1L390 1219 aa13.18□□□□□ -0.3
CHD8-206ENST00000553870 SRPK2P78362 688 aaKnown RBP13.18□□□□□ -0.3
CHD8-206ENST00000553870 DDX17Q92841 729 aaKnown RBP13.18□□□□□ -0.3
CHD8-206ENST00000553870 PUS7Q96PZ0 661 aaKnown RBP13.18□□□□□ -0.3
CHD8-206ENST00000553870 KRT28Q7Z3Y7 464 aa13.17□□□□□ -0.3
CHD8-206ENST00000553870 KIF1AQ12756 1690 aa13.17□□□□□ -0.3
CHD8-206ENST00000553870 NGDNQ8NEJ9 315 aaKnown RBP13.16□□□□□ -0.3
CHD8-206ENST00000553870 PMFBP1Q8TBY8 1022 aa13.16□□□□□ -0.3
CHD8-206ENST00000553870 ST20-MTHFSA0A0A6YYL1 179 aa13.15□□□□□ -0.3
CHD8-206ENST00000553870 CABP2Q9NPB3 220 aa13.15□□□□□ -0.3
CHD8-206ENST00000553870 USP32Q8NFA0 1604 aa13.14□□□□□ -0.31
CHD8-206ENST00000553870 SBNO1A3KN83 1393 aa13.14□□□□□ -0.31
CHD8-206ENST00000553870 ATP7BP35670 1465 aa13.14□□□□□ -0.31
CHD8-206ENST00000553870 PXDNQ92626 1479 aa13.14□□□□□ -0.31
CHD8-206ENST00000553870 QRICH2Q9H0J4 1663 aa13.14□□□□□ -0.31
CHD8-206ENST00000553870 SPATA31A3Q5VYP0 1347 aa13.13□□□□□ -0.31
CHD8-206ENST00000553870 RGPD8O14715 1765 aaPredicted RBP13.13□□□□□ -0.31
CHD8-206ENST00000553870 USP47Q96K76 1375 aa13.13□□□□□ -0.31
CHD8-206ENST00000553870 TESK2Q96S53 571 aa13.13□□□□□ -0.31
CHD8-206ENST00000553870 SHPRHQ149N8 1683 aa13.12□□□□□ -0.31
CHD8-206ENST00000553870 POLR3AO14802 1390 aaPredicted RBP13.12□□□□□ -0.31
CHD8-206ENST00000553870 ATAD2Q6PL18 1390 aa13.12□□□□□ -0.31
CHD8-206ENST00000553870 PNPLA6Q8IY17 1366 aa13.12□□□□□ -0.31
CHD8-206ENST00000553870 XPCQ01831 940 aaPredicted RBP13.12□□□□□ -0.31
CHD8-206ENST00000553870 ZNF692Q9BU19 519 aaPredicted RBP13.12□□□□□ -0.31
CHD8-206ENST00000553870 ACEP12821 1306 aa13.12□□□□□ -0.31
CHD8-206ENST00000553870 BRD4O60885 1362 aaPredicted RBP13.11□□□□□ -0.31
CHD8-206ENST00000553870 CDCA8Q53HL2 280 aa13.11□□□□□ -0.31
CHD8-206ENST00000553870 CABP1Q9NZU7 370 aa13.11□□□□□ -0.31
CHD8-206ENST00000553870 ITSN1Q15811 1721 aa13.1□□□□□ -0.31
CHD8-206ENST00000553870 ARHGEF10O15013 1369 aa13.1□□□□□ -0.31
CHD8-206ENST00000553870 TMF1P82094 1093 aa13.1□□□□□ -0.31
CHD8-206ENST00000553870 PPIP5K1Q6PFW1 1433 aa13.1□□□□□ -0.31
CHD8-206ENST00000553870 DISP3Q9P2K9 1392 aa13.09□□□□□ -0.31
CHD8-206ENST00000553870 EIF4G2P78344 907 aaKnown RBP eCLIP13.09□□□□□ -0.31
CHD8-206ENST00000553870 MED1Q15648 1581 aaPredicted RBP13.08□□□□□ -0.32
CHD8-206ENST00000553870 TNS3Q68CZ2 1445 aa13.08□□□□□ -0.32
CHD8-206ENST00000553870 NUTM2BA6NNL0 878 aaPredicted RBP13.08□□□□□ -0.32
CHD8-206ENST00000553870 NUTM2EB1AL46 878 aaPredicted RBP13.08□□□□□ -0.32
CHD8-206ENST00000553870 MEX3CQ5U5Q3 659 aaKnown RBP13.08□□□□□ -0.32
CHD8-206ENST00000553870 NUTM2AQ8IVF1 878 aaPredicted RBP13.08□□□□□ -0.32
CHD8-206ENST00000553870 NINLQ9Y2I6 1382 aa13.07□□□□□ -0.32
CHD8-206ENST00000553870 TOPAZ1Q8N9V7 1692 aa13.06□□□□□ -0.32
CHD8-206ENST00000553870 PAK3O75914 559 aaPredicted RBP13.06□□□□□ -0.32
CHD8-206ENST00000553870 LMOD2Q6P5Q4 547 aa13.06□□□□□ -0.32
CHD8-206ENST00000553870 COL22A1Q8NFW1 1626 aaPredicted RBP13.06□□□□□ -0.32
CHD8-206ENST00000553870 TERF2IPQ9NYB0 399 aa13.05□□□□□ -0.32
CHD8-206ENST00000553870 ZNF772Q68DY9 489 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms