RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 MED1Q15648 1581 aaPredicted RBP29.52■■■□□ 2.32
FOXA1-203ENST00000553751 KIAA1210Q9ULL0 1709 aa29.51■■■□□ 2.32
FOXA1-203ENST00000553751 DISP3Q9P2K9 1392 aa29.49■■■□□ 2.31
FOXA1-203ENST00000553751 NHSL1Q5SYE7 1610 aa29.49■■■□□ 2.31
FOXA1-203ENST00000553751 L3MBTL2Q969R5 705 aa29.48■■■□□ 2.31
FOXA1-203ENST00000553751 NEUROD1Q13562 356 aa29.47■■■□□ 2.31
FOXA1-203ENST00000553751 PRAM1Q96QH2 718 aa29.47■■■□□ 2.31
FOXA1-203ENST00000553751 TRAK1Q9UPV9 953 aa29.45■■■□□ 2.31
FOXA1-203ENST00000553751 FMN2Q9NZ56 1722 aa29.45■■■□□ 2.3
FOXA1-203ENST00000553751 ARHGEF28Q8N1W1 1705 aaKnown RBP29.42■■■□□ 2.3
FOXA1-203ENST00000553751 ADGRB2O60241 1585 aa29.41■■■□□ 2.3
FOXA1-203ENST00000553751 SAFB2Q14151 953 aaKnown RBP eCLIP29.41■■■□□ 2.3
FOXA1-203ENST00000553751 ORAI2Q96SN7 254 aa29.41■■■□□ 2.3
FOXA1-203ENST00000553751 JCADQ9P266 1359 aa29.4■■■□□ 2.3
FOXA1-203ENST00000553751 POGKQ9P215 609 aa29.4■■■□□ 2.3
FOXA1-203ENST00000553751 NBPF1Q3BBV0 1214 aa29.37■■■□□ 2.29
FOXA1-203ENST00000553751 DDX17Q92841 729 aaKnown RBP29.37■■■□□ 2.29
FOXA1-203ENST00000553751 SHPRHQ149N8 1683 aa29.36■■■□□ 2.29
FOXA1-203ENST00000553751 PCGF6Q9BYE7 350 aa29.35■■■□□ 2.29
FOXA1-203ENST00000553751 TRPM1Q7Z4N2 1603 aa29.34■■■□□ 2.29
FOXA1-203ENST00000553751 NUTM2FA1L443 756 aa29.34■■■□□ 2.29
FOXA1-203ENST00000553751 ESCO1Q5FWF5 840 aa29.32■■■□□ 2.28
FOXA1-203ENST00000553751 MINK1Q8N4C8 1332 aaPredicted RBP29.29■■■□□ 2.28
FOXA1-203ENST00000553751 USP32Q8NFA0 1604 aa29.29■■■□□ 2.28
FOXA1-203ENST00000553751 TONSLQ96HA7 1378 aa29.28■■■□□ 2.28
FOXA1-203ENST00000553751 KIF1AQ12756 1690 aa29.28■■■□□ 2.28
FOXA1-203ENST00000553751 SOS2Q07890 1332 aaPredicted RBP29.28■■■□□ 2.28
FOXA1-203ENST00000553751 HIRIP3Q9BW71 556 aaPredicted RBP29.28■■■□□ 2.28
FOXA1-203ENST00000553751 RGPD8O14715 1765 aaPredicted RBP29.27■■■□□ 2.28
FOXA1-203ENST00000553751 ANKARQ7Z5J8 1434 aa29.27■■■□□ 2.28
FOXA1-203ENST00000553751 SPATA31A6Q5VVP1 1343 aa29.26■■■□□ 2.27
FOXA1-203ENST00000553751 PXDNQ92626 1479 aa29.26■■■□□ 2.27
FOXA1-203ENST00000553751 LRRC59Q96AG4 307 aaKnown RBP29.26■■■□□ 2.27
FOXA1-203ENST00000553751 LRP6O75581 1613 aa29.26■■■□□ 2.27
FOXA1-203ENST00000553751 TULP4Q9NRJ4 1543 aa29.25■■■□□ 2.27
FOXA1-203ENST00000553751 NPHP3Q7Z494 1330 aa29.24■■■□□ 2.27
FOXA1-203ENST00000553751 PNPLA6Q8IY17 1366 aa29.24■■■□□ 2.27
FOXA1-203ENST00000553751 NBPF8Q3BBV2 869 aa29.23■■■□□ 2.27
FOXA1-203ENST00000553751 PHF23Q9BUL5 403 aaPredicted RBP29.23■■■□□ 2.27
FOXA1-203ENST00000553751 WASLO00401 505 aaPredicted RBP29.22■■■□□ 2.27
FOXA1-203ENST00000553751 ROCK2O75116 1388 aaKnown RBP29.22■■■□□ 2.27
FOXA1-203ENST00000553751 EIF3AQ14152 1382 aaKnown RBP29.22■■■□□ 2.27
FOXA1-203ENST00000553751 FOXO3O43524 673 aa29.21■■■□□ 2.27
FOXA1-203ENST00000553751 ILDR2Q71H61 639 aa29.2■■■□□ 2.26
FOXA1-203ENST00000553751 PRR36Q9H6K5 1346 aa29.19■■■□□ 2.26
FOXA1-203ENST00000553751 GPRASP1Q5JY77 1395 aa29.18■■■□□ 2.26
FOXA1-203ENST00000553751 PHF8Q9UPP1 1060 aa29.18■■■□□ 2.26
FOXA1-203ENST00000553751 XPCQ01831 940 aaPredicted RBP29.17■■■□□ 2.26
FOXA1-203ENST00000553751 QRICH2Q9H0J4 1663 aa29.17■■■□□ 2.26
FOXA1-203ENST00000553751 CENPJQ9HC77 1338 aaPredicted RBP29.17■■■□□ 2.26
FOXA1-203ENST00000553751 ATP7BP35670 1465 aa29.16■■■□□ 2.26
FOXA1-203ENST00000553751 RALGAPBQ86X10 1494 aa29.16■■■□□ 2.26
FOXA1-203ENST00000553751 RGS17Q9UGC6 210 aaPredicted RBP29.15■■■□□ 2.26
FOXA1-203ENST00000553751 COL22A1Q8NFW1 1626 aaPredicted RBP29.15■■■□□ 2.26
FOXA1-203ENST00000553751 CLSPNQ9HAW4 1339 aa29.12■■■□□ 2.25
FOXA1-203ENST00000553751 ITSN1Q15811 1721 aa29.11■■■□□ 2.25
FOXA1-203ENST00000553751 TOPAZ1Q8N9V7 1692 aa29.1■■■□□ 2.25
FOXA1-203ENST00000553751 NUTM2BA6NNL0 878 aaPredicted RBP29.1■■■□□ 2.25
FOXA1-203ENST00000553751 NUTM2EB1AL46 878 aaPredicted RBP29.1■■■□□ 2.25
FOXA1-203ENST00000553751 NUTM2AQ8IVF1 878 aaPredicted RBP29.1■■■□□ 2.25
FOXA1-203ENST00000553751 CDK19Q9BWU1 502 aa29.1■■■□□ 2.25
FOXA1-203ENST00000553751 PMFBP1Q8TBY8 1022 aa29.09■■■□□ 2.25
FOXA1-203ENST00000553751 MEX3CQ5U5Q3 659 aaKnown RBP29.08■■■□□ 2.25
FOXA1-203ENST00000553751 KRT28Q7Z3Y7 464 aa29.08■■■□□ 2.25
FOXA1-203ENST00000553751 NUDT16Q96DE0 195 aaKnown RBP29.07■■■□□ 2.24
FOXA1-203ENST00000553751 SPATA31A3Q5VYP0 1347 aa29.06■■■□□ 2.24
FOXA1-203ENST00000553751 TNS3Q68CZ2 1445 aa29.05■■■□□ 2.24
FOXA1-203ENST00000553751 CARD11Q9BXL7 1154 aa29.04■■■□□ 2.24
FOXA1-203ENST00000553751 TRPM3Q9HCF6 1732 aaPredicted RBP29.03■■■□□ 2.24
FOXA1-203ENST00000553751 SBNO1A3KN83 1393 aa29.03■■■□□ 2.24
FOXA1-203ENST00000553751 PSME1Q06323 249 aa29.02■■■□□ 2.24
FOXA1-203ENST00000553751 POTEAQ6S8J7 498 aa28.99■■■□□ 2.23
FOXA1-203ENST00000553751 SRPK2P78362 688 aaKnown RBP28.98■■■□□ 2.23
FOXA1-203ENST00000553751 CCDC61Q9Y6R9 512 aa28.98■■■□□ 2.23
FOXA1-203ENST00000553751 NGDNQ8NEJ9 315 aaKnown RBP28.97■■■□□ 2.23
FOXA1-203ENST00000553751 CABP2Q9NPB3 220 aa28.97■■■□□ 2.23
FOXA1-203ENST00000553751 TIMELESSQ9UNS1 1208 aa28.97■■■□□ 2.23
FOXA1-203ENST00000553751 POLR3AO14802 1390 aaPredicted RBP28.97■■■□□ 2.23
FOXA1-203ENST00000553751 ALS2Q96Q42 1657 aa28.96■■■□□ 2.23
FOXA1-203ENST00000553751 ADAMTS2O95450 1211 aa28.96■■■□□ 2.23
FOXA1-203ENST00000553751 SBNO2Q9Y2G9 1366 aa28.96■■■□□ 2.23
FOXA1-203ENST00000553751 C8orf37Q96NL8 207 aa28.95■■■□□ 2.22
FOXA1-203ENST00000553751 ARHGEF10O15013 1369 aa28.95■■■□□ 2.22
FOXA1-203ENST00000553751 EVC2Q86UK5 1308 aa28.94■■■□□ 2.22
FOXA1-203ENST00000553751 PPIP5K1Q6PFW1 1433 aa28.94■■■□□ 2.22
FOXA1-203ENST00000553751 PLEKHG3A1L390 1219 aa28.94■■■□□ 2.22
FOXA1-203ENST00000553751 CCER1Q8TC90 406 aaPredicted RBP28.94■■■□□ 2.22
FOXA1-203ENST00000553751 AFF2P51816 1311 aa28.94■■■□□ 2.22
FOXA1-203ENST00000553751 ZNF772Q68DY9 489 aaPredicted RBP28.93■■■□□ 2.22
FOXA1-203ENST00000553751 ABCA3Q99758 1704 aa28.93■■■□□ 2.22
FOXA1-203ENST00000553751 MARF1Q9Y4F3 1742 aaKnown RBP28.92■■■□□ 2.22
FOXA1-203ENST00000553751 ACEP12821 1306 aa28.92■■■□□ 2.22
FOXA1-203ENST00000553751 LMOD2Q6P5Q4 547 aa28.89■■■□□ 2.22
FOXA1-203ENST00000553751 NGLY1Q96IV0 654 aa28.87■■■□□ 2.21
FOXA1-203ENST00000553751 SOCS7O14512 581 aa28.86■■■□□ 2.21
FOXA1-203ENST00000553751 CABLES1Q8TDN4 633 aa28.85■■■□□ 2.21
FOXA1-203ENST00000553751 CRYBG1Q9Y4K1 1723 aa28.85■■■□□ 2.21
FOXA1-203ENST00000553751 CABP1Q9NZU7 370 aa28.84■■■□□ 2.21
FOXA1-203ENST00000553751 PAK3O75914 559 aaPredicted RBP28.83■■■□□ 2.21
FOXA1-203ENST00000553751 FNBP4Q8N3X1 1017 aaPredicted RBP28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms