RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 GUCA2AQ02747 115 aa8.64□□□□□ -1.03
ATXN3-220ENST00000553491 GGCXP38435 758 aa8.63□□□□□ -1.03
ATXN3-220ENST00000553491 NUTM1Q86Y26 1132 aa8.63□□□□□ -1.03
ATXN3-220ENST00000553491 ANKLE1Q8NAG6 615 aa8.63□□□□□ -1.03
ATXN3-220ENST00000553491 PCDHGC3Q9UN70 934 aa8.63□□□□□ -1.03
ATXN3-220ENST00000553491 EIF4G1Q04637 1599 aaKnown RBP8.63□□□□□ -1.03
ATXN3-220ENST00000553491 MSS51Q4VC12 460 aa8.62□□□□□ -1.03
ATXN3-220ENST00000553491 NDUFV2P19404 249 aa8.61□□□□□ -1.03
ATXN3-220ENST00000553491 Q3C1V9 767 aa8.61□□□□□ -1.03
ATXN3-220ENST00000553491 PLA2G2CQ5R387 149 aa8.61□□□□□ -1.03
ATXN3-220ENST00000553491 PRKD2Q9BZL6 878 aa8.61□□□□□ -1.03
ATXN3-220ENST00000553491 PRDM9Q9NQV7 894 aa8.61□□□□□ -1.03
ATXN3-220ENST00000553491 V9GY48 417 aaPredicted RBP8.61□□□□□ -1.03
ATXN3-220ENST00000553491 MOXD2PA6NHM9 499 aa8.6□□□□□ -1.03
ATXN3-220ENST00000553491 BRPF1P55201 1214 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-220ENST00000553491 TBC1D2Q9BYX2 928 aa8.6□□□□□ -1.03
ATXN3-220ENST00000553491 SYMPKQ92797 1274 aaKnown RBP8.59□□□□□ -1.03
ATXN3-220ENST00000553491 FDX1P10109 184 aa8.58□□□□□ -1.04
ATXN3-220ENST00000553491 MMP16P51512 607 aa8.58□□□□□ -1.04
ATXN3-220ENST00000553491 LIAT1Q6ZQX7 453 aa8.58□□□□□ -1.04
ATXN3-220ENST00000553491 USB1Q9BQ65 265 aaKnown RBP8.58□□□□□ -1.04
ATXN3-220ENST00000553491 GJA5P36382 358 aa8.57□□□□□ -1.04
ATXN3-220ENST00000553491 GPBP1L1Q9HC44 474 aaPredicted RBP8.57□□□□□ -1.04
ATXN3-220ENST00000553491 CECR2Q9BXF3 1484 aa8.57□□□□□ -1.04
ATXN3-220ENST00000553491 RSBN1LQ6PCB5 846 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-220ENST00000553491 SPTLC1O15269 473 aa8.55□□□□□ -1.04
ATXN3-220ENST00000553491 DXOO77932 396 aaKnown RBP8.55□□□□□ -1.04
ATXN3-220ENST00000553491 SLC19A1P41440 591 aa8.55□□□□□ -1.04
ATXN3-220ENST00000553491 DIXDC1Q155Q3 683 aa8.55□□□□□ -1.04
ATXN3-220ENST00000553491 KDM4CQ9H3R0 1056 aa8.55□□□□□ -1.04
ATXN3-220ENST00000553491 FCF1Q9Y324 198 aaKnown RBP8.54□□□□□ -1.04
ATXN3-220ENST00000553491 PCDHB15Q9Y5E8 787 aa8.54□□□□□ -1.04
ATXN3-220ENST00000553491 NEUROD2Q15784 382 aa8.53□□□□□ -1.04
ATXN3-220ENST00000553491 TMEM132AQ24JP5 1023 aa8.53□□□□□ -1.04
ATXN3-220ENST00000553491 MYSM1Q5VVJ2 828 aa8.53□□□□□ -1.04
ATXN3-220ENST00000553491 SPRYD7Q5W111 196 aa8.53□□□□□ -1.04
ATXN3-220ENST00000553491 RETREG3Q86VR2 466 aa8.53□□□□□ -1.04
ATXN3-220ENST00000553491 TRIM67Q6ZTA4 783 aa8.52□□□□□ -1.05
ATXN3-220ENST00000553491 RIC3Q7Z5B4 369 aa8.52□□□□□ -1.05
ATXN3-220ENST00000553491 IRX2Q9BZI1 471 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-220ENST00000553491 FAM117AQ9C073 453 aa8.52□□□□□ -1.05
ATXN3-220ENST00000553491 LIMD1Q9UGP4 676 aa8.52□□□□□ -1.05
ATXN3-220ENST00000553491 JUNDP17535 347 aa8.51□□□□□ -1.05
ATXN3-220ENST00000553491 PLEKHG3A1L390 1219 aa8.5□□□□□ -1.05
ATXN3-220ENST00000553491 C6orf229H3BNL8 230 aa8.5□□□□□ -1.05
ATXN3-220ENST00000553491 RPIAP49247 311 aa8.5□□□□□ -1.05
ATXN3-220ENST00000553491 TUSC1Q2TAM9 212 aa8.5□□□□□ -1.05
ATXN3-220ENST00000553491 ZNF598Q86UK7 904 aaKnown RBP8.5□□□□□ -1.05
ATXN3-220ENST00000553491 SMARCA4P51532 1647 aa8.5□□□□□ -1.05
ATXN3-220ENST00000553491 MTMR2Q13614 643 aa8.49□□□□□ -1.05
ATXN3-220ENST00000553491 HRCP23327 699 aa8.48□□□□□ -1.05
ATXN3-220ENST00000553491 PRPF38BQ5VTL8 546 aaKnown RBP8.48□□□□□ -1.05
ATXN3-220ENST00000553491 PRR7Q8TB68 274 aa8.48□□□□□ -1.05
ATXN3-220ENST00000553491 SPDYE5A6NIY4 337 aa8.47□□□□□ -1.05
ATXN3-220ENST00000553491 QPCTQ16769 361 aa8.47□□□□□ -1.05
ATXN3-220ENST00000553491 CABLES1Q8TDN4 633 aa8.47□□□□□ -1.05
ATXN3-220ENST00000553491 CFAP99D6REC4 459 aa8.46□□□□□ -1.06
ATXN3-220ENST00000553491 GDF9O60383 454 aa8.46□□□□□ -1.06
ATXN3-220ENST00000553491 GFRA3O60609 400 aa8.46□□□□□ -1.06
ATXN3-220ENST00000553491 LILRB3O75022 631 aa8.46□□□□□ -1.06
ATXN3-220ENST00000553491 ZNF697Q5TEC3 545 aa8.46□□□□□ -1.06
ATXN3-220ENST00000553491 DESI1Q6ICB0 168 aa8.46□□□□□ -1.06
ATXN3-220ENST00000553491 BAZ1AQ9NRL2 1556 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-220ENST00000553491 CLK2P49760 499 aaKnown RBP8.45□□□□□ -1.06
ATXN3-220ENST00000553491 FBXO31Q5XUX0 539 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-220ENST00000553491 PTCRAQ6ISU1 281 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-220ENST00000553491 DDRGK1Q96HY6 314 aa8.45□□□□□ -1.06
ATXN3-220ENST00000553491 RSPH6AQ9H0K4 717 aa8.45□□□□□ -1.06
ATXN3-220ENST00000553491 ZBTB3Q9H5J0 574 aa8.45□□□□□ -1.06
ATXN3-220ENST00000553491 PKD2L1Q9P0L9 805 aa8.45□□□□□ -1.06
ATXN3-220ENST00000553491 PRR20EP86478 221 aa8.44□□□□□ -1.06
ATXN3-220ENST00000553491 PRR20CP86479 221 aa8.44□□□□□ -1.06
ATXN3-220ENST00000553491 PRR20DP86480 221 aa8.44□□□□□ -1.06
ATXN3-220ENST00000553491 PRR20BP86481 221 aa8.44□□□□□ -1.06
ATXN3-220ENST00000553491 PRR20AP86496 221 aa8.44□□□□□ -1.06
ATXN3-220ENST00000553491 SH3D19Q5HYK7 790 aa8.44□□□□□ -1.06
ATXN3-220ENST00000553491 POLR3EQ9NVU0 708 aa8.44□□□□□ -1.06
ATXN3-220ENST00000553491 GTF3C3Q9Y5Q9 886 aa8.44□□□□□ -1.06
ATXN3-220ENST00000553491 MROH2BQ7Z745 1585 aa8.44□□□□□ -1.06
ATXN3-220ENST00000553491 NRG2O14511 850 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-220ENST00000553491 LCE2BO14633 110 aa8.43□□□□□ -1.06
ATXN3-220ENST00000553491 LAPTM4AQ15012 233 aa8.43□□□□□ -1.06
ATXN3-220ENST00000553491 SKIV2LQ15477 1246 aaKnown RBP8.43□□□□□ -1.06
ATXN3-220ENST00000553491 PTPRNQ16849 979 aa8.43□□□□□ -1.06
ATXN3-220ENST00000553491 CSPP1Q1MSJ5 1256 aa8.43□□□□□ -1.06
ATXN3-220ENST00000553491 NUDT12Q9BQG2 462 aa8.43□□□□□ -1.06
ATXN3-220ENST00000553491 PDZRN3Q9UPQ7 1066 aa8.43□□□□□ -1.06
ATXN3-220ENST00000553491 WIZO95785 1651 aa8.43□□□□□ -1.06
ATXN3-220ENST00000553491 CD2BP2O95400 341 aaKnown RBP8.42□□□□□ -1.06
ATXN3-220ENST00000553491 TRIM32Q13049 653 aa8.42□□□□□ -1.06
ATXN3-220ENST00000553491 RTL5Q5HYW3 569 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-220ENST00000553491 CCDC24Q8N4L8 307 aa8.42□□□□□ -1.06
ATXN3-220ENST00000553491 PROCA1Q8NCQ7 364 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-220ENST00000553491 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.42□□□□□ -1.06
ATXN3-220ENST00000553491 EVA1BQ9NVM1 165 aa8.42□□□□□ -1.06
ATXN3-220ENST00000553491 SMARCA2P51531 1590 aa8.42□□□□□ -1.06
ATXN3-220ENST00000553491 LYPD8Q6UX82 237 aa8.41□□□□□ -1.06
ATXN3-220ENST00000553491 ATAD2BQ9ULI0 1458 aa8.4□□□□□ -1.06
ATXN3-220ENST00000553491 ZBTB24O43167 697 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-220ENST00000553491 CCNYL3P0C7X3 344 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms