RNA–Protein interactions for RNA: ENST00000553265.5

PRKCH-204, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-204ENST00000553265 SLC4A3P48751 1232 aa11.11□□□□□ -0.63
PRKCH-204ENST00000553265 RSPH4AQ5TD94 716 aa11.11□□□□□ -0.63
PRKCH-204ENST00000553265 SPTLC1O15269 473 aa11.1□□□□□ -0.63
PRKCH-204ENST00000553265 HOXA2O43364 376 aa11.1□□□□□ -0.63
PRKCH-204ENST00000553265 LRCH3Q96II8 777 aa11.1□□□□□ -0.63
PRKCH-204ENST00000553265 QPCTQ16769 361 aa11.09□□□□□ -0.63
PRKCH-204ENST00000553265 STAC3Q96MF2 364 aa11.09□□□□□ -0.63
PRKCH-204ENST00000553265 KRTAP3-3Q9BYR6 98 aa11.09□□□□□ -0.63
PRKCH-204ENST00000553265 KRTAP3-2Q9BYR7 98 aa11.09□□□□□ -0.63
PRKCH-204ENST00000553265 PCDHB15Q9Y5E8 787 aa11.09□□□□□ -0.63
PRKCH-204ENST00000553265 GOLGA8CPA6NN73 597 aa11.08□□□□□ -0.64
PRKCH-204ENST00000553265 BCAMP50895 628 aa11.08□□□□□ -0.64
PRKCH-204ENST00000553265 FUT2Q10981 343 aa11.08□□□□□ -0.64
PRKCH-204ENST00000553265 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.08□□□□□ -0.64
PRKCH-204ENST00000553265 ABCC8Q09428 1581 aa11.07□□□□□ -0.64
PRKCH-204ENST00000553265 RFC5P40937 340 aa11.07□□□□□ -0.64
PRKCH-204ENST00000553265 CABLES1Q8TDN4 633 aa11.07□□□□□ -0.64
PRKCH-204ENST00000553265 ANKK1Q8NFD2 765 aa11.06□□□□□ -0.64
PRKCH-204ENST00000553265 POLA1P09884 1462 aaPredicted RBP11.06□□□□□ -0.64
PRKCH-204ENST00000553265 FDX1P10109 184 aa11.05□□□□□ -0.64
PRKCH-204ENST00000553265 USP46P62068 366 aa11.05□□□□□ -0.64
PRKCH-204ENST00000553265 PCDHGC3Q9UN70 934 aa11.05□□□□□ -0.64
PRKCH-204ENST00000553265 MCM6Q14566 821 aa11.04□□□□□ -0.64
PRKCH-204ENST00000553265 HPS5Q9UPZ3 1129 aa11.04□□□□□ -0.64
PRKCH-204ENST00000553265 FLIIQ13045 1269 aa11.03□□□□□ -0.64
PRKCH-204ENST00000553265 RTL5Q5HYW3 569 aaPredicted RBP11.03□□□□□ -0.64
PRKCH-204ENST00000553265 WNT2BQ93097 391 aa11.03□□□□□ -0.64
PRKCH-204ENST00000553265 AQRO60306 1485 aaKnown RBP eCLIP11.02□□□□□ -0.65
PRKCH-204ENST00000553265 ARAP1Q96P48 1450 aa11.02□□□□□ -0.65
PRKCH-204ENST00000553265 NUTM2BA6NNL0 878 aaPredicted RBP11.02□□□□□ -0.65
PRKCH-204ENST00000553265 NUTM2EB1AL46 878 aaPredicted RBP11.02□□□□□ -0.65
PRKCH-204ENST00000553265 SUPT5HO00267 1087 aaKnown RBP11.02□□□□□ -0.65
PRKCH-204ENST00000553265 LILRB3O75022 631 aa11.02□□□□□ -0.65
PRKCH-204ENST00000553265 TUSC1Q2TAM9 212 aa11.02□□□□□ -0.65
PRKCH-204ENST00000553265 PUS10Q3MIT2 529 aaKnown RBP11.02□□□□□ -0.65
PRKCH-204ENST00000553265 KMT5BQ4FZB7 885 aa11.02□□□□□ -0.65
PRKCH-204ENST00000553265 NUTM2DQ5VT03 806 aaPredicted RBP11.02□□□□□ -0.65
PRKCH-204ENST00000553265 PPP2R2DQ66LE6 453 aa11.02□□□□□ -0.65
PRKCH-204ENST00000553265 NUTM2AQ8IVF1 878 aaPredicted RBP11.02□□□□□ -0.65
PRKCH-204ENST00000553265 SOWAHBA6NEL2 793 aa11.01□□□□□ -0.65
PRKCH-204ENST00000553265 WDR97A6NE52 1622 aa11.01□□□□□ -0.65
PRKCH-204ENST00000553265 HRCP23327 699 aa11□□□□□ -0.65
PRKCH-204ENST00000553265 GJA5P36382 358 aa11□□□□□ -0.65
PRKCH-204ENST00000553265 POTEGQ6S5H5 508 aa11□□□□□ -0.65
PRKCH-204ENST00000553265 CLASP1Q7Z460 1538 aa10.99□□□□□ -0.65
PRKCH-204ENST00000553265 PPP4CP60510 307 aa10.99□□□□□ -0.65
PRKCH-204ENST00000553265 CLUAP1Q96AJ1 413 aa10.99□□□□□ -0.65
PRKCH-204ENST00000553265 ZMYND15Q9H091 742 aa10.99□□□□□ -0.65
PRKCH-204ENST00000553265 ZBTB3Q9H5J0 574 aa10.99□□□□□ -0.65
PRKCH-204ENST00000553265 SNRKQ9NRH2 765 aa10.99□□□□□ -0.65
PRKCH-204ENST00000553265 POTEMA6NI47 508 aa10.98□□□□□ -0.65
PRKCH-204ENST00000553265 ATP6V1AP38606 617 aa10.98□□□□□ -0.65
PRKCH-204ENST00000553265 APLP1P51693 650 aa10.98□□□□□ -0.65
PRKCH-204ENST00000553265 SYMPKQ92797 1274 aaKnown RBP10.98□□□□□ -0.65
PRKCH-204ENST00000553265 RAD54L2Q9Y4B4 1467 aa10.98□□□□□ -0.65
PRKCH-204ENST00000553265 ACTN4O43707 911 aaKnown RBP10.97□□□□□ -0.65
PRKCH-204ENST00000553265 AP1G2O75843 785 aa10.97□□□□□ -0.65
PRKCH-204ENST00000553265 UBTFP17480 764 aaKnown RBP10.97□□□□□ -0.65
PRKCH-204ENST00000553265 GRIPAP1Q4V328 841 aa10.97□□□□□ -0.65
PRKCH-204ENST00000553265 CDAN1Q8IWY9 1227 aa10.97□□□□□ -0.65
PRKCH-204ENST00000553265 CUX1P39880 1505 aa10.96□□□□□ -0.65
PRKCH-204ENST00000553265 FGD5Q6ZNL6 1462 aa10.96□□□□□ -0.65
PRKCH-204ENST00000553265 C6orf229H3BNL8 230 aa10.96□□□□□ -0.65
PRKCH-204ENST00000553265 MTMR2Q13614 643 aa10.96□□□□□ -0.65
PRKCH-204ENST00000553265 PRPF38BQ5VTL8 546 aaKnown RBP10.96□□□□□ -0.65
PRKCH-204ENST00000553265 NECTIN2Q92692 538 aa10.96□□□□□ -0.65
PRKCH-204ENST00000553265 KCTD12Q96CX2 325 aaKnown RBP10.96□□□□□ -0.65
PRKCH-204ENST00000553265 TSR3Q9UJK0 312 aaKnown RBP10.96□□□□□ -0.65
PRKCH-204ENST00000553265 SNAPC4Q5SXM2 1469 aa10.95□□□□□ -0.66
PRKCH-204ENST00000553265 MORN1Q5T089 497 aa10.95□□□□□ -0.66
PRKCH-204ENST00000553265 TSC1Q92574 1164 aa10.95□□□□□ -0.66
PRKCH-204ENST00000553265 POM121Q96HA1 1249 aa10.95□□□□□ -0.66
PRKCH-204ENST00000553265 WBP1LQ9NX94 342 aa10.95□□□□□ -0.66
PRKCH-204ENST00000553265 TMEM259Q4ZIN3 620 aa10.94□□□□□ -0.66
PRKCH-204ENST00000553265 SLC27A5Q9Y2P5 690 aa10.94□□□□□ -0.66
PRKCH-204ENST00000553265 PBRM1Q86U86 1689 aa10.93□□□□□ -0.66
PRKCH-204ENST00000553265 SPDYE5A6NIY4 337 aa10.93□□□□□ -0.66
PRKCH-204ENST00000553265 USP17L8P0C7I0 530 aa10.93□□□□□ -0.66
PRKCH-204ENST00000553265 THSD4Q6ZMP0 1018 aa10.93□□□□□ -0.66
PRKCH-204ENST00000553265 CFAP99D6REC4 459 aa10.92□□□□□ -0.66
PRKCH-204ENST00000553265 MTMR14Q8NCE2 650 aa10.92□□□□□ -0.66
PRKCH-204ENST00000553265 BANK1Q8NDB2 785 aa10.92□□□□□ -0.66
PRKCH-204ENST00000553265 PRR14Q9BWN1 585 aa10.92□□□□□ -0.66
PRKCH-204ENST00000553265 MAGI1Q96QZ7 1491 aaPredicted RBP10.92□□□□□ -0.66
PRKCH-204ENST00000553265 SYNJ1O43426 1573 aa10.91□□□□□ -0.66
PRKCH-204ENST00000553265 BLOC1S3Q6QNY0 202 aa10.91□□□□□ -0.66
PRKCH-204ENST00000553265 RNF19BQ6ZMZ0 732 aa10.91□□□□□ -0.66
PRKCH-204ENST00000553265 PCDHB3Q9Y5E6 796 aa10.91□□□□□ -0.66
PRKCH-204ENST00000553265 SOGA1O94964 1423 aa10.91□□□□□ -0.66
PRKCH-204ENST00000553265 ABCA5Q8WWZ7 1642 aa10.91□□□□□ -0.66
PRKCH-204ENST00000553265 TDRD9Q8NDG6 1382 aaKnown RBP10.9□□□□□ -0.66
PRKCH-204ENST00000553265 CTDSPL2Q05D32 466 aa10.89□□□□□ -0.67
PRKCH-204ENST00000553265 GRIN2BQ13224 1484 aa10.88□□□□□ -0.67
PRKCH-204ENST00000553265 CYB5RLQ6IPT4 315 aa10.88□□□□□ -0.67
PRKCH-204ENST00000553265 PRR7Q8TB68 274 aa10.88□□□□□ -0.67
PRKCH-204ENST00000553265 SYNJ2O15056 1496 aa10.87□□□□□ -0.67
PRKCH-204ENST00000553265 HELBQ8NG08 1087 aaPredicted RBP10.87□□□□□ -0.67
PRKCH-204ENST00000553265 HMX1Q9NP08 348 aaPredicted RBP10.87□□□□□ -0.67
PRKCH-204ENST00000553265 COG6Q9Y2V7 657 aa10.87□□□□□ -0.67
PRKCH-204ENST00000553265 ARID3CA6NKF2 412 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms