RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 HMX1Q9NP08 348 aaPredicted RBP7.12□□□□□ -1.27
LSM6P2-201ENST00000552208 SMAPO00193 183 aa7.11□□□□□ -1.27
LSM6P2-201ENST00000552208 SLC10A3P09131 477 aa7.11□□□□□ -1.27
LSM6P2-201ENST00000552208 FDX1P10109 184 aa7.11□□□□□ -1.27
LSM6P2-201ENST00000552208 CTDSPL2Q05D32 466 aa7.11□□□□□ -1.27
LSM6P2-201ENST00000552208 WASHC4Q2M389 1173 aa7.11□□□□□ -1.27
LSM6P2-201ENST00000552208 CFAP70Q5T0N1 1121 aa7.11□□□□□ -1.27
LSM6P2-201ENST00000552208 RDH13Q8NBN7 331 aa7.11□□□□□ -1.27
LSM6P2-201ENST00000552208 RGS22Q8NE09 1264 aa7.11□□□□□ -1.27
LSM6P2-201ENST00000552208 PBXIP1Q96AQ6 731 aa7.11□□□□□ -1.27
LSM6P2-201ENST00000552208 PLA2G2EQ9NZK7 142 aa7.11□□□□□ -1.27
LSM6P2-201ENST00000552208 PDE4CQ08493 712 aa7.1□□□□□ -1.27
LSM6P2-201ENST00000552208 PROX2Q3B8N5 592 aa7.1□□□□□ -1.27
LSM6P2-201ENST00000552208 ALG2Q9H553 416 aa7.09□□□□□ -1.27
LSM6P2-201ENST00000552208 HLA-CQ95604 372 aa7.08□□□□□ -1.28
LSM6P2-201ENST00000552208 KCNH8Q96L42 1107 aa7.08□□□□□ -1.28
LSM6P2-201ENST00000552208 GZF1Q9H116 711 aaPredicted RBP7.08□□□□□ -1.28
LSM6P2-201ENST00000552208 GUCA2AQ02747 115 aa7.07□□□□□ -1.28
LSM6P2-201ENST00000552208 MTMR2Q13614 643 aa7.07□□□□□ -1.28
LSM6P2-201ENST00000552208 RSPH4AQ5TD94 716 aa7.07□□□□□ -1.28
LSM6P2-201ENST00000552208 LRRN4Q8WUT4 740 aa7.07□□□□□ -1.28
LSM6P2-201ENST00000552208 ZBED2Q9BTP6 218 aa7.07□□□□□ -1.28
LSM6P2-201ENST00000552208 PPP1R12CQ9BZL4 782 aa7.07□□□□□ -1.28
LSM6P2-201ENST00000552208 KIAA1468Q9P260 1216 aa7.07□□□□□ -1.28
LSM6P2-201ENST00000552208 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.06□□□□□ -1.28
LSM6P2-201ENST00000552208 CFAP99D6REC4 459 aa7.06□□□□□ -1.28
LSM6P2-201ENST00000552208 VARS2Q5ST30 1063 aaKnown RBP7.06□□□□□ -1.28
LSM6P2-201ENST00000552208 USTQ9Y2C2 406 aa7.06□□□□□ -1.28
LSM6P2-201ENST00000552208 BRD1O95696 1058 aa7.05□□□□□ -1.28
LSM6P2-201ENST00000552208 VAC14Q08AM6 782 aa7.05□□□□□ -1.28
LSM6P2-201ENST00000552208 SWT1Q5T5J6 900 aaKnown RBP7.05□□□□□ -1.28
LSM6P2-201ENST00000552208 TMCO4Q5TGY1 634 aa7.05□□□□□ -1.28
LSM6P2-201ENST00000552208 ZNF687Q8N1G0 1237 aa7.05□□□□□ -1.28
LSM6P2-201ENST00000552208 EPS8L1Q8TE68 723 aa7.05□□□□□ -1.28
LSM6P2-201ENST00000552208 UCN2Q96RP3 112 aa7.05□□□□□ -1.28
LSM6P2-201ENST00000552208 PALM3A6NDB9 673 aaPredicted RBP7.04□□□□□ -1.28
LSM6P2-201ENST00000552208 HELBQ8NG08 1087 aaPredicted RBP7.04□□□□□ -1.28
LSM6P2-201ENST00000552208 KCNK17Q96T54 332 aa7.04□□□□□ -1.28
LSM6P2-201ENST00000552208 PATL2C9JE40 543 aaKnown RBP7.03□□□□□ -1.28
LSM6P2-201ENST00000552208 RFX1P22670 979 aa7.03□□□□□ -1.28
LSM6P2-201ENST00000552208 MFAP1P55081 439 aaKnown RBP7.03□□□□□ -1.28
LSM6P2-201ENST00000552208 KCNA1Q09470 495 aa7.03□□□□□ -1.28
LSM6P2-201ENST00000552208 MTMR7Q9Y216 660 aa7.03□□□□□ -1.28
LSM6P2-201ENST00000552208 SOX11P35716 441 aa7.02□□□□□ -1.29
LSM6P2-201ENST00000552208 PBX2P40425 430 aa7.02□□□□□ -1.29
LSM6P2-201ENST00000552208 PRR7Q8TB68 274 aa7.02□□□□□ -1.29
LSM6P2-201ENST00000552208 SLC4A5Q9BY07 1137 aa7.02□□□□□ -1.29
LSM6P2-201ENST00000552208 RABGEF1Q9UJ41 708 aa7.02□□□□□ -1.29
LSM6P2-201ENST00000552208 FUT2Q10981 343 aa7.01□□□□□ -1.29
LSM6P2-201ENST00000552208 TFIP11Q9UBB9 837 aaKnown RBP7.01□□□□□ -1.29
LSM6P2-201ENST00000552208 ATG7O95352 703 aa7□□□□□ -1.29
LSM6P2-201ENST00000552208 CSB-PGBD3P0DP91 1061 aa7□□□□□ -1.29
LSM6P2-201ENST00000552208 SLF2Q8IX21 1173 aa7□□□□□ -1.29
LSM6P2-201ENST00000552208 CARNS1A5YM72 827 aa6.99□□□□□ -1.29
LSM6P2-201ENST00000552208 TMEM88BA6NKF7 163 aa6.99□□□□□ -1.29
LSM6P2-201ENST00000552208 C6orf229H3BNL8 230 aa6.99□□□□□ -1.29
LSM6P2-201ENST00000552208 ARHGAP33O14559 1287 aa6.99□□□□□ -1.29
LSM6P2-201ENST00000552208 LMOD1P29536 600 aaPredicted RBP6.99□□□□□ -1.29
LSM6P2-201ENST00000552208 PSEN2P49810 448 aa6.99□□□□□ -1.29
LSM6P2-201ENST00000552208 NR6A1Q15406 480 aa6.99□□□□□ -1.29
LSM6P2-201ENST00000552208 GRIPAP1Q4V328 841 aa6.99□□□□□ -1.29
LSM6P2-201ENST00000552208 POTEEQ6S8J3 1075 aa6.99□□□□□ -1.29
LSM6P2-201ENST00000552208 SYMPKQ92797 1274 aaKnown RBP6.99□□□□□ -1.29
LSM6P2-201ENST00000552208 MAFBQ9Y5Q3 323 aaPredicted RBP6.99□□□□□ -1.29
LSM6P2-201ENST00000552208 PER1O15534 1290 aaPredicted RBP6.98□□□□□ -1.29
LSM6P2-201ENST00000552208 ATP6V1AP38606 617 aa6.98□□□□□ -1.29
LSM6P2-201ENST00000552208 FAM98CQ17RN3 349 aaKnown RBP6.98□□□□□ -1.29
LSM6P2-201ENST00000552208 SEPT9Q9UHD8 586 aaPredicted RBP6.98□□□□□ -1.29
LSM6P2-201ENST00000552208 CFHP08603 1231 aa6.97□□□□□ -1.29
LSM6P2-201ENST00000552208 DESI1Q6ICB0 168 aa6.97□□□□□ -1.29
LSM6P2-201ENST00000552208 ANKRD13DQ6ZTN6 518 aa6.97□□□□□ -1.29
LSM6P2-201ENST00000552208 TSC1Q92574 1164 aa6.97□□□□□ -1.29
LSM6P2-201ENST00000552208 TBC1D9Q6ZT07 1266 aa6.96□□□□□ -1.3
LSM6P2-201ENST00000552208 RETREG3Q86VR2 466 aa6.96□□□□□ -1.3
LSM6P2-201ENST00000552208 VRTNQ9H8Y1 702 aa6.96□□□□□ -1.3
LSM6P2-201ENST00000552208 HDGFP51858 240 aaKnown RBP6.95□□□□□ -1.3
LSM6P2-201ENST00000552208 SEMA3FQ13275 785 aa6.95□□□□□ -1.3
LSM6P2-201ENST00000552208 MORN1Q5T089 497 aa6.95□□□□□ -1.3
LSM6P2-201ENST00000552208 KANK4Q5T7N3 995 aaPredicted RBP6.95□□□□□ -1.3
LSM6P2-201ENST00000552208 FOXD4L5Q5VV16 416 aaPredicted RBP6.95□□□□□ -1.3
LSM6P2-201ENST00000552208 LYPD8Q6UX82 237 aa6.95□□□□□ -1.3
LSM6P2-201ENST00000552208 SAMD7Q7Z3H4 446 aa6.95□□□□□ -1.3
LSM6P2-201ENST00000552208 FOXD4L4Q8WXT5 416 aaPredicted RBP6.95□□□□□ -1.3
LSM6P2-201ENST00000552208 HCSTQ9UBK5 93 aa6.95□□□□□ -1.3
LSM6P2-201ENST00000552208 ATP9BO43861 1147 aa6.94□□□□□ -1.3
LSM6P2-201ENST00000552208 DMRTA1Q5VZB9 504 aa6.94□□□□□ -1.3
LSM6P2-201ENST00000552208 LAPTM4BQ86VI4 370 aa6.94□□□□□ -1.3
LSM6P2-201ENST00000552208 IRX2Q9BZI1 471 aaPredicted RBP6.94□□□□□ -1.3
LSM6P2-201ENST00000552208 SLC4A3P48751 1232 aa6.93□□□□□ -1.3
LSM6P2-201ENST00000552208 NR1H3Q13133 447 aa6.93□□□□□ -1.3
LSM6P2-201ENST00000552208 CDCA8Q53HL2 280 aa6.93□□□□□ -1.3
LSM6P2-201ENST00000552208 ZNF428Q96B54 188 aa6.93□□□□□ -1.3
LSM6P2-201ENST00000552208 VPS9D1Q9Y2B5 631 aa6.93□□□□□ -1.3
LSM6P2-201ENST00000552208 SLC27A5Q9Y2P5 690 aa6.93□□□□□ -1.3
LSM6P2-201ENST00000552208 BHMG1C9JSJ3 638 aaPredicted RBP6.92□□□□□ -1.3
LSM6P2-201ENST00000552208 TK2O00142 265 aa6.92□□□□□ -1.3
LSM6P2-201ENST00000552208 EIF4G2P78344 907 aaKnown RBP eCLIP6.92□□□□□ -1.3
LSM6P2-201ENST00000552208 ELOAQ14241 798 aaKnown RBP6.92□□□□□ -1.3
LSM6P2-201ENST00000552208 NFATC2IPQ8NCF5 419 aa6.92□□□□□ -1.3
LSM6P2-201ENST00000552208 PNMA1Q8ND90 353 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms