RNA–Protein interactions for RNA: ENST00000552063.1

AC008083.3-202, humanhuman

TSL 3 BASIC

Gene AC008083.3, Length 277 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008083.3-202ENST00000552063 HLA-CQ95604 372 aa8.35□□□□□ -1.07
AC008083.3-202ENST00000552063 LCE2AQ5TA79 106 aaPredicted RBP8.34□□□□□ -1.07
AC008083.3-202ENST00000552063 CYP4X1Q8N118 509 aa8.34□□□□□ -1.07
AC008083.3-202ENST00000552063 KDM4AO75164 1064 aa8.33□□□□□ -1.08
AC008083.3-202ENST00000552063 Q3C1V9 767 aa8.33□□□□□ -1.08
AC008083.3-202ENST00000552063 DXOO77932 396 aaKnown RBP8.32□□□□□ -1.08
AC008083.3-202ENST00000552063 MDM2Q00987 491 aaPredicted RBP8.32□□□□□ -1.08
AC008083.3-202ENST00000552063 TRIM32Q13049 653 aa8.32□□□□□ -1.08
AC008083.3-202ENST00000552063 USB1Q9BQ65 265 aaKnown RBP8.32□□□□□ -1.08
AC008083.3-202ENST00000552063 WNT7AO00755 349 aa8.31□□□□□ -1.08
AC008083.3-202ENST00000552063 ZBTB24O43167 697 aaPredicted RBP8.31□□□□□ -1.08
AC008083.3-202ENST00000552063 SMCPP49901 116 aaPredicted RBP8.31□□□□□ -1.08
AC008083.3-202ENST00000552063 AXIN1O15169 862 aa8.3□□□□□ -1.08
AC008083.3-202ENST00000552063 CTC1Q2NKJ3 1217 aa8.3□□□□□ -1.08
AC008083.3-202ENST00000552063 GMPR2Q9P2T1 348 aaKnown RBP8.3□□□□□ -1.08
AC008083.3-202ENST00000552063 MINK1Q8N4C8 1332 aaPredicted RBP8.29□□□□□ -1.08
AC008083.3-202ENST00000552063 TTC24A2A3L6 582 aaPredicted RBP8.29□□□□□ -1.08
AC008083.3-202ENST00000552063 HOXA2O43364 376 aa8.29□□□□□ -1.08
AC008083.3-202ENST00000552063 SMPD1P17405 629 aa8.29□□□□□ -1.08
AC008083.3-202ENST00000552063 TREML4Q6UXN2 200 aa8.29□□□□□ -1.08
AC008083.3-202ENST00000552063 CCDC102AQ96A19 550 aa8.29□□□□□ -1.08
AC008083.3-202ENST00000552063 USP46P62068 366 aa8.28□□□□□ -1.08
AC008083.3-202ENST00000552063 GUCA2AQ02747 115 aa8.28□□□□□ -1.08
AC008083.3-202ENST00000552063 MRGPRX2Q96LB1 330 aa8.28□□□□□ -1.08
AC008083.3-202ENST00000552063 J3QL48 77 aa8.27□□□□□ -1.09
AC008083.3-202ENST00000552063 SNIP1Q8TAD8 396 aaKnown RBP8.27□□□□□ -1.09
AC008083.3-202ENST00000552063 FAM217BQ9NTX9 383 aaPredicted RBP8.26□□□□□ -1.09
AC008083.3-202ENST00000552063 C11orf95C9JLR9 678 aaPredicted RBP8.25□□□□□ -1.09
AC008083.3-202ENST00000552063 SKOR1P84550 965 aa8.25□□□□□ -1.09
AC008083.3-202ENST00000552063 SYMPKQ92797 1274 aaKnown RBP8.25□□□□□ -1.09
AC008083.3-202ENST00000552063 GPCPD1Q9NPB8 672 aa8.25□□□□□ -1.09
AC008083.3-202ENST00000552063 CCDC24Q8N4L8 307 aa8.24□□□□□ -1.09
AC008083.3-202ENST00000552063 TULP1O00294 542 aaPredicted RBP8.23□□□□□ -1.09
AC008083.3-202ENST00000552063 CLCN1P35523 988 aa8.23□□□□□ -1.09
AC008083.3-202ENST00000552063 VSIG10Q8N0Z9 540 aa8.23□□□□□ -1.09
AC008083.3-202ENST00000552063 REPIN1Q9BWE0 567 aaKnown RBP8.23□□□□□ -1.09
AC008083.3-202ENST00000552063 JUNDP17535 347 aa8.22□□□□□ -1.09
AC008083.3-202ENST00000552063 RC3H1Q5TC82 1133 aaKnown RBP8.22□□□□□ -1.09
AC008083.3-202ENST00000552063 HPS1Q92902 700 aa8.22□□□□□ -1.09
AC008083.3-202ENST00000552063 ATP13A2Q9NQ11 1180 aa8.22□□□□□ -1.09
AC008083.3-202ENST00000552063 WNT7BP56706 349 aa8.21□□□□□ -1.1
AC008083.3-202ENST00000552063 PCDHGC3Q9UN70 934 aa8.21□□□□□ -1.1
AC008083.3-202ENST00000552063 SNRPBP14678 240 aaKnown RBP8.2□□□□□ -1.1
AC008083.3-202ENST00000552063 NFX1Q12986 1120 aaKnown RBP8.2□□□□□ -1.1
AC008083.3-202ENST00000552063 PTCRAQ6ISU1 281 aaPredicted RBP8.2□□□□□ -1.1
AC008083.3-202ENST00000552063 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.19□□□□□ -1.1
AC008083.3-202ENST00000552063 RETREG3Q86VR2 466 aa8.19□□□□□ -1.1
AC008083.3-202ENST00000552063 WFS1O76024 890 aa8.18□□□□□ -1.1
AC008083.3-202ENST00000552063 LCE2CQ5TA81 110 aa8.18□□□□□ -1.1
AC008083.3-202ENST00000552063 SIAH2O43255 324 aa8.17□□□□□ -1.1
AC008083.3-202ENST00000552063 FDX1P10109 184 aa8.17□□□□□ -1.1
AC008083.3-202ENST00000552063 NUTM1Q86Y26 1132 aa8.17□□□□□ -1.1
AC008083.3-202ENST00000552063 TRIM47Q96LD4 638 aa8.17□□□□□ -1.1
AC008083.3-202ENST00000552063 NUDT12Q9BQG2 462 aa8.17□□□□□ -1.1
AC008083.3-202ENST00000552063 SPIRE2Q8WWL2 714 aa8.15□□□□□ -1.1
AC008083.3-202ENST00000552063 ALDH1A1P00352 501 aa8.14□□□□□ -1.11
AC008083.3-202ENST00000552063 SSTR3P32745 418 aaPredicted RBP8.14□□□□□ -1.11
AC008083.3-202ENST00000552063 KRI1Q8N9T8 703 aaKnown RBP8.14□□□□□ -1.11
AC008083.3-202ENST00000552063 C6orf229H3BNL8 230 aa8.13□□□□□ -1.11
AC008083.3-202ENST00000552063 NDUFV2P19404 249 aa8.13□□□□□ -1.11
AC008083.3-202ENST00000552063 SENP2Q9HC62 589 aa8.13□□□□□ -1.11
AC008083.3-202ENST00000552063 MOXD2PA6NHM9 499 aa8.12□□□□□ -1.11
AC008083.3-202ENST00000552063 WIPF1O43516 503 aa8.12□□□□□ -1.11
AC008083.3-202ENST00000552063 CCNYL3P0C7X3 344 aa8.12□□□□□ -1.11
AC008083.3-202ENST00000552063 MS4A1P11836 297 aa8.12□□□□□ -1.11
AC008083.3-202ENST00000552063 SH3BP2P78314 561 aa8.12□□□□□ -1.11
AC008083.3-202ENST00000552063 TERTO14746 1132 aaKnown RBP8.11□□□□□ -1.11
AC008083.3-202ENST00000552063 BARGINQ6ZT62 677 aa8.11□□□□□ -1.11
AC008083.3-202ENST00000552063 EHBP1Q8NDI1 1231 aa8.11□□□□□ -1.11
AC008083.3-202ENST00000552063 ZMYND10O75800 440 aa8.1□□□□□ -1.11
AC008083.3-202ENST00000552063 AMHR2Q16671 573 aa8.1□□□□□ -1.11
AC008083.3-202ENST00000552063 PTPRNQ16849 979 aa8.1□□□□□ -1.11
AC008083.3-202ENST00000552063 EVA1BQ9NVM1 165 aa8.1□□□□□ -1.11
AC008083.3-202ENST00000552063 TRIM46Q7Z4K8 759 aa8.09□□□□□ -1.11
AC008083.3-202ENST00000552063 KIFC2Q96AC6 838 aa8.09□□□□□ -1.11
AC008083.3-202ENST00000552063 UNC93B1Q9H1C4 597 aa8.09□□□□□ -1.11
AC008083.3-202ENST00000552063 BMP1P13497 986 aa8.08□□□□□ -1.12
AC008083.3-202ENST00000552063 TTLL12Q14166 644 aaPredicted RBP8.08□□□□□ -1.12
AC008083.3-202ENST00000552063 GIGYF2Q6Y7W6 1299 aaKnown RBP8.08□□□□□ -1.12
AC008083.3-202ENST00000552063 PRR7Q8TB68 274 aa8.08□□□□□ -1.12
AC008083.3-202ENST00000552063 KCNH2Q12809 1159 aa8.07□□□□□ -1.12
AC008083.3-202ENST00000552063 LINC01559Q495D7 138 aa8.07□□□□□ -1.12
AC008083.3-202ENST00000552063 ZC3H15Q8WU90 426 aaKnown RBP8.07□□□□□ -1.12
AC008083.3-202ENST00000552063 BAP1Q92560 729 aa8.07□□□□□ -1.12
AC008083.3-202ENST00000552063 CAPN5O15484 640 aaPredicted RBP8.06□□□□□ -1.12
AC008083.3-202ENST00000552063 MTMR2Q13614 643 aa8.06□□□□□ -1.12
AC008083.3-202ENST00000552063 DESI1Q6ICB0 168 aa8.06□□□□□ -1.12
AC008083.3-202ENST00000552063 BEGAINQ9BUH8 593 aa8.06□□□□□ -1.12
AC008083.3-202ENST00000552063 TLL2Q9Y6L7 1015 aa8.06□□□□□ -1.12
AC008083.3-202ENST00000552063 ZNF511Q8NB15 262 aa8.05□□□□□ -1.12
AC008083.3-202ENST00000552063 WASF2Q9Y6W5 498 aa8.05□□□□□ -1.12
AC008083.3-202ENST00000552063 TBC1D2Q9BYX2 928 aa8.04□□□□□ -1.12
AC008083.3-202ENST00000552063 STK17AQ9UEE5 414 aa8.04□□□□□ -1.12
AC008083.3-202ENST00000552063 SPDYE5A6NIY4 337 aa8.03□□□□□ -1.12
AC008083.3-202ENST00000552063 GJA5P36382 358 aa8.03□□□□□ -1.12
AC008083.3-202ENST00000552063 INSM1Q01101 510 aaPredicted RBP8.03□□□□□ -1.12
AC008083.3-202ENST00000552063 RSBN1LQ6PCB5 846 aaPredicted RBP8.03□□□□□ -1.12
AC008083.3-202ENST00000552063 PARP9Q8IXQ6 854 aa8.03□□□□□ -1.12
AC008083.3-202ENST00000552063 PCDHB15Q9Y5E8 787 aa8.03□□□□□ -1.12
AC008083.3-202ENST00000552063 CFAP99D6REC4 459 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms