RNA–Protein interactions for RNA: ENST00000551888.5

CDK4-210, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 636 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-210ENST00000551888 TRAK1Q9UPV9 953 aa25.26■■□□□ 1.63
CDK4-210ENST00000551888 MST1RQ04912 1400 aa25.26■■□□□ 1.63
CDK4-210ENST00000551888 SIRT1Q96EB6 747 aa25.25■■□□□ 1.63
CDK4-210ENST00000551888 CADPS2Q86UW7 1296 aa25.24■■□□□ 1.63
CDK4-210ENST00000551888 PRAM1Q96QH2 718 aa25.24■■□□□ 1.63
CDK4-210ENST00000551888 ATF3P18847 181 aa25.23■■□□□ 1.63
CDK4-210ENST00000551888 FMN2Q9NZ56 1722 aa25.23■■□□□ 1.63
CDK4-210ENST00000551888 ADGRB2O60241 1585 aa25.22■■□□□ 1.63
CDK4-210ENST00000551888 SLAIN2Q9P270 581 aa25.22■■□□□ 1.63
CDK4-210ENST00000551888 RALGAPBQ86X10 1494 aa25.21■■□□□ 1.63
CDK4-210ENST00000551888 SAFB2Q14151 953 aaKnown RBP eCLIP25.2■■□□□ 1.62
CDK4-210ENST00000551888 ROCK2O75116 1388 aaKnown RBP25.18■■□□□ 1.62
CDK4-210ENST00000551888 RGPD8O14715 1765 aaPredicted RBP25.18■■□□□ 1.62
CDK4-210ENST00000551888 GPRASP1Q5JY77 1395 aa25.18■■□□□ 1.62
CDK4-210ENST00000551888 QRICH2Q9H0J4 1663 aa25.17■■□□□ 1.62
CDK4-210ENST00000551888 C1orf167Q5SNV9 1468 aa25.17■■□□□ 1.62
CDK4-210ENST00000551888 POGKQ9P215 609 aa25.16■■□□□ 1.62
CDK4-210ENST00000551888 HSPA1LP34931 641 aa25.15■■□□□ 1.62
CDK4-210ENST00000551888 USP32Q8NFA0 1604 aa25.15■■□□□ 1.62
CDK4-210ENST00000551888 NHSL1Q5SYE7 1610 aa25.14■■□□□ 1.61
CDK4-210ENST00000551888 PHLPP1O60346 1717 aa25.13■■□□□ 1.61
CDK4-210ENST00000551888 AHDC1Q5TGY3 1603 aaPredicted RBP25.12■■□□□ 1.61
CDK4-210ENST00000551888 MINK1Q8N4C8 1332 aaPredicted RBP25.12■■□□□ 1.61
CDK4-210ENST00000551888 BRINP3Q76B58 766 aa25.11■■□□□ 1.61
CDK4-210ENST00000551888 HIRIP3Q9BW71 556 aaPredicted RBP25.11■■□□□ 1.61
CDK4-210ENST00000551888 TIMELESSQ9UNS1 1208 aa25.1■■□□□ 1.61
CDK4-210ENST00000551888 COL16A1Q07092 1604 aaPredicted RBP25.1■■□□□ 1.61
CDK4-210ENST00000551888 NUTM2FA1L443 756 aa25.07■■□□□ 1.6
CDK4-210ENST00000551888 ORAI2Q96SN7 254 aa25.06■■□□□ 1.6
CDK4-210ENST00000551888 CENPJQ9HC77 1338 aaPredicted RBP25.06■■□□□ 1.6
CDK4-210ENST00000551888 TULP4Q9NRJ4 1543 aa25.05■■□□□ 1.6
CDK4-210ENST00000551888 CARD11Q9BXL7 1154 aa25.04■■□□□ 1.6
CDK4-210ENST00000551888 KIF1AQ12756 1690 aa25.04■■□□□ 1.6
CDK4-210ENST00000551888 DDX17Q92841 729 aaKnown RBP25.02■■□□□ 1.6
CDK4-210ENST00000551888 TOPAZ1Q8N9V7 1692 aa25.01■■□□□ 1.59
CDK4-210ENST00000551888 WASLO00401 505 aaPredicted RBP25.01■■□□□ 1.59
CDK4-210ENST00000551888 PRR36Q9H6K5 1346 aa25.01■■□□□ 1.59
CDK4-210ENST00000551888 EIF3AQ14152 1382 aaKnown RBP25.01■■□□□ 1.59
CDK4-210ENST00000551888 ANKARQ7Z5J8 1434 aa25.01■■□□□ 1.59
CDK4-210ENST00000551888 ATP7BP35670 1465 aa25.01■■□□□ 1.59
CDK4-210ENST00000551888 ITSN1Q15811 1721 aa25■■□□□ 1.59
CDK4-210ENST00000551888 ESCO1Q5FWF5 840 aa24.98■■□□□ 1.59
CDK4-210ENST00000551888 PXDNQ92626 1479 aa24.95■■□□□ 1.58
CDK4-210ENST00000551888 SHPRHQ149N8 1683 aa24.94■■□□□ 1.58
CDK4-210ENST00000551888 CDK19Q9BWU1 502 aa24.94■■□□□ 1.58
CDK4-210ENST00000551888 SBNO2Q9Y2G9 1366 aa24.93■■□□□ 1.58
CDK4-210ENST00000551888 PHF8Q9UPP1 1060 aa24.91■■□□□ 1.58
CDK4-210ENST00000551888 USP47Q96K76 1375 aa24.91■■□□□ 1.58
CDK4-210ENST00000551888 SOS2Q07890 1332 aaPredicted RBP24.9■■□□□ 1.58
CDK4-210ENST00000551888 FOXO3O43524 673 aa24.9■■□□□ 1.58
CDK4-210ENST00000551888 NUDT16Q96DE0 195 aaKnown RBP24.89■■□□□ 1.58
CDK4-210ENST00000551888 MED1Q15648 1581 aaPredicted RBP24.88■■□□□ 1.57
CDK4-210ENST00000551888 CABP2Q9NPB3 220 aa24.88■■□□□ 1.57
CDK4-210ENST00000551888 TRPM3Q9HCF6 1732 aaPredicted RBP24.88■■□□□ 1.57
CDK4-210ENST00000551888 NPHP3Q7Z494 1330 aa24.87■■□□□ 1.57
CDK4-210ENST00000551888 XPCQ01831 940 aaPredicted RBP24.87■■□□□ 1.57
CDK4-210ENST00000551888 PMFBP1Q8TBY8 1022 aa24.87■■□□□ 1.57
CDK4-210ENST00000551888 JCADQ9P266 1359 aa24.87■■□□□ 1.57
CDK4-210ENST00000551888 ST20-MTHFSA0A0A6YYL1 179 aa24.86■■□□□ 1.57
CDK4-210ENST00000551888 TESK2Q96S53 571 aa24.86■■□□□ 1.57
CDK4-210ENST00000551888 SRPK2P78362 688 aaKnown RBP24.85■■□□□ 1.57
CDK4-210ENST00000551888 EVC2Q86UK5 1308 aa24.85■■□□□ 1.57
CDK4-210ENST00000551888 COL22A1Q8NFW1 1626 aaPredicted RBP24.83■■□□□ 1.56
CDK4-210ENST00000551888 PNPLA6Q8IY17 1366 aa24.82■■□□□ 1.56
CDK4-210ENST00000551888 PPIP5K1Q6PFW1 1433 aa24.82■■□□□ 1.56
CDK4-210ENST00000551888 CCDC61Q9Y6R9 512 aa24.81■■□□□ 1.56
CDK4-210ENST00000551888 LRP6O75581 1613 aa24.81■■□□□ 1.56
CDK4-210ENST00000551888 LRRC59Q96AG4 307 aaKnown RBP24.8■■□□□ 1.56
CDK4-210ENST00000551888 ALS2Q96Q42 1657 aa24.8■■□□□ 1.56
CDK4-210ENST00000551888 AKAP12Q02952 1782 aa24.79■■□□□ 1.56
CDK4-210ENST00000551888 POLR3AO14802 1390 aaPredicted RBP24.79■■□□□ 1.56
CDK4-210ENST00000551888 KRT28Q7Z3Y7 464 aa24.78■■□□□ 1.56
CDK4-210ENST00000551888 PLEKHG3A1L390 1219 aa24.77■■□□□ 1.56
CDK4-210ENST00000551888 DISP3Q9P2K9 1392 aa24.77■■□□□ 1.56
CDK4-210ENST00000551888 TNS3Q68CZ2 1445 aa24.77■■□□□ 1.56
CDK4-210ENST00000551888 ABCA3Q99758 1704 aa24.76■■□□□ 1.55
CDK4-210ENST00000551888 NGDNQ8NEJ9 315 aaKnown RBP24.75■■□□□ 1.55
CDK4-210ENST00000551888 ACEP12821 1306 aa24.75■■□□□ 1.55
CDK4-210ENST00000551888 SPATA31A3Q5VYP0 1347 aa24.75■■□□□ 1.55
CDK4-210ENST00000551888 SBNO1A3KN83 1393 aa24.75■■□□□ 1.55
CDK4-210ENST00000551888 PSME1Q06323 249 aa24.74■■□□□ 1.55
CDK4-210ENST00000551888 SPATA31A6Q5VVP1 1343 aa24.74■■□□□ 1.55
CDK4-210ENST00000551888 ATAD2Q6PL18 1390 aa24.74■■□□□ 1.55
CDK4-210ENST00000551888 CABP1Q9NZU7 370 aa24.73■■□□□ 1.55
CDK4-210ENST00000551888 CRYBG1Q9Y4K1 1723 aa24.72■■□□□ 1.55
CDK4-210ENST00000551888 MON2Q7Z3U7 1717 aa24.72■■□□□ 1.55
CDK4-210ENST00000551888 NRKQ7Z2Y5 1582 aa24.71■■□□□ 1.55
CDK4-210ENST00000551888 CD163L1Q9NR16 1453 aa24.7■■□□□ 1.54
CDK4-210ENST00000551888 MARF1Q9Y4F3 1742 aaKnown RBP24.69■■□□□ 1.54
CDK4-210ENST00000551888 MYOM1P52179 1685 aa24.69■■□□□ 1.54
CDK4-210ENST00000551888 HSPA5P11021 654 aaKnown RBP24.69■■□□□ 1.54
CDK4-210ENST00000551888 USP6P35125 1406 aa24.68■■□□□ 1.54
CDK4-210ENST00000551888 NUTM2BA6NNL0 878 aaPredicted RBP24.67■■□□□ 1.54
CDK4-210ENST00000551888 NUTM2EB1AL46 878 aaPredicted RBP24.67■■□□□ 1.54
CDK4-210ENST00000551888 EIF4G2P78344 907 aaKnown RBP eCLIP24.67■■□□□ 1.54
CDK4-210ENST00000551888 NUTM2AQ8IVF1 878 aaPredicted RBP24.67■■□□□ 1.54
CDK4-210ENST00000551888 PUS7Q96PZ0 661 aaKnown RBP24.66■■□□□ 1.54
CDK4-210ENST00000551888 CPSF1Q10570 1443 aaKnown RBP24.66■■□□□ 1.54
CDK4-210ENST00000551888 TMF1P82094 1093 aa24.65■■□□□ 1.54
CDK4-210ENST00000551888 SSH2Q76I76 1423 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms