RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 MAPKBP1O60336 1514 aa7.21□□□□□ -1.26
LSM3P2-201ENST00000551246 RNF40O75150 1001 aa7.2□□□□□ -1.26
LSM3P2-201ENST00000551246 GCGRP47871 477 aa7.2□□□□□ -1.26
LSM3P2-201ENST00000551246 FAM43AQ8N2R8 423 aa7.2□□□□□ -1.26
LSM3P2-201ENST00000551246 RDH13Q8NBN7 331 aa7.2□□□□□ -1.26
LSM3P2-201ENST00000551246 DDRGK1Q96HY6 314 aa7.2□□□□□ -1.26
LSM3P2-201ENST00000551246 TSR3Q9UJK0 312 aaKnown RBP7.2□□□□□ -1.26
LSM3P2-201ENST00000551246 SOGA1O94964 1423 aa7.19□□□□□ -1.26
LSM3P2-201ENST00000551246 CFHP08603 1231 aa7.19□□□□□ -1.26
LSM3P2-201ENST00000551246 RTL5Q5HYW3 569 aaPredicted RBP7.19□□□□□ -1.26
LSM3P2-201ENST00000551246 RNF166Q96A37 237 aaPredicted RBP7.19□□□□□ -1.26
LSM3P2-201ENST00000551246 ZMYND15Q9H091 742 aa7.19□□□□□ -1.26
LSM3P2-201ENST00000551246 WBP1LQ9NX94 342 aa7.19□□□□□ -1.26
LSM3P2-201ENST00000551246 PODXL2Q9NZ53 605 aa7.19□□□□□ -1.26
LSM3P2-201ENST00000551246 ABCC8Q09428 1581 aa7.19□□□□□ -1.26
LSM3P2-201ENST00000551246 KIF21BO75037 1637 aa7.19□□□□□ -1.26
LSM3P2-201ENST00000551246 APLP1P51693 650 aa7.18□□□□□ -1.26
LSM3P2-201ENST00000551246 MMRN1Q13201 1228 aa7.18□□□□□ -1.26
LSM3P2-201ENST00000551246 BAZ1BQ9UIG0 1483 aaKnown RBP7.17□□□□□ -1.26
LSM3P2-201ENST00000551246 SMARCA2P51531 1590 aa7.17□□□□□ -1.26
LSM3P2-201ENST00000551246 SLC4A3P48751 1232 aa7.17□□□□□ -1.26
LSM3P2-201ENST00000551246 SPIRE2Q8WWL2 714 aa7.17□□□□□ -1.26
LSM3P2-201ENST00000551246 PPP4CP60510 307 aa7.16□□□□□ -1.26
LSM3P2-201ENST00000551246 NECTIN2Q92692 538 aa7.16□□□□□ -1.26
LSM3P2-201ENST00000551246 TBC1D2Q9BYX2 928 aa7.16□□□□□ -1.26
LSM3P2-201ENST00000551246 MROH2BQ7Z745 1585 aa7.16□□□□□ -1.26
LSM3P2-201ENST00000551246 BAZ1AQ9NRL2 1556 aaPredicted RBP7.16□□□□□ -1.26
LSM3P2-201ENST00000551246 PPM1GO15355 546 aaPredicted RBP7.15□□□□□ -1.26
LSM3P2-201ENST00000551246 ACTN4O43707 911 aaKnown RBP7.15□□□□□ -1.26
LSM3P2-201ENST00000551246 KDM4AO75164 1064 aa7.15□□□□□ -1.26
LSM3P2-201ENST00000551246 FUT2Q10981 343 aa7.15□□□□□ -1.26
LSM3P2-201ENST00000551246 DDX10Q13206 875 aaKnown RBP7.15□□□□□ -1.26
LSM3P2-201ENST00000551246 RSPH4AQ5TD94 716 aa7.15□□□□□ -1.26
LSM3P2-201ENST00000551246 MYSM1Q5VVJ2 828 aa7.15□□□□□ -1.26
LSM3P2-201ENST00000551246 TRIM52Q96A61 297 aa7.15□□□□□ -1.26
LSM3P2-201ENST00000551246 BRPF3Q9ULD4 1205 aa7.15□□□□□ -1.26
LSM3P2-201ENST00000551246 WDR97A6NE52 1622 aa7.14□□□□□ -1.27
LSM3P2-201ENST00000551246 HOXA2O43364 376 aa7.14□□□□□ -1.27
LSM3P2-201ENST00000551246 PTPN5P54829 565 aa7.14□□□□□ -1.27
LSM3P2-201ENST00000551246 TMEM132AQ24JP5 1023 aa7.14□□□□□ -1.27
LSM3P2-201ENST00000551246 KMT5BQ4FZB7 885 aa7.14□□□□□ -1.27
LSM3P2-201ENST00000551246 GLIPR1L2Q4G1C9 344 aa7.14□□□□□ -1.27
LSM3P2-201ENST00000551246 SH3D19Q5HYK7 790 aa7.14□□□□□ -1.27
LSM3P2-201ENST00000551246 RUSC2Q8N2Y8 1516 aa7.14□□□□□ -1.27
LSM3P2-201ENST00000551246 ANP32CO43423 234 aa7.13□□□□□ -1.27
LSM3P2-201ENST00000551246 ANP32AP39687 249 aaKnown RBP7.13□□□□□ -1.27
LSM3P2-201ENST00000551246 USP46P62068 366 aa7.13□□□□□ -1.27
LSM3P2-201ENST00000551246 NYAP1Q6ZVC0 841 aa7.13□□□□□ -1.27
LSM3P2-201ENST00000551246 HLA-CQ95604 372 aa7.13□□□□□ -1.27
LSM3P2-201ENST00000551246 GOPCQ9HD26 462 aa7.13□□□□□ -1.27
LSM3P2-201ENST00000551246 MOXD2PA6NHM9 499 aa7.12□□□□□ -1.27
LSM3P2-201ENST00000551246 PRR14Q9BWN1 585 aa7.12□□□□□ -1.27
LSM3P2-201ENST00000551246 CECR2Q9BXF3 1484 aa7.11□□□□□ -1.27
LSM3P2-201ENST00000551246 SPTLC1O15269 473 aa7.11□□□□□ -1.27
LSM3P2-201ENST00000551246 RRP9O43818 475 aaKnown RBP7.11□□□□□ -1.27
LSM3P2-201ENST00000551246 GUCA2AQ02747 115 aa7.11□□□□□ -1.27
LSM3P2-201ENST00000551246 DIXDC1Q155Q3 683 aa7.11□□□□□ -1.27
LSM3P2-201ENST00000551246 MORN1Q5T089 497 aa7.11□□□□□ -1.27
LSM3P2-201ENST00000551246 RSBN1LQ6PCB5 846 aaPredicted RBP7.11□□□□□ -1.27
LSM3P2-201ENST00000551246 NUTM1Q86Y26 1132 aa7.11□□□□□ -1.27
LSM3P2-201ENST00000551246 LIMD1Q9UGP4 676 aa7.11□□□□□ -1.27
LSM3P2-201ENST00000551246 CENPJQ9HC77 1338 aaPredicted RBP7.1□□□□□ -1.27
LSM3P2-201ENST00000551246 NDUFV2P19404 249 aa7.1□□□□□ -1.27
LSM3P2-201ENST00000551246 GJA5P36382 358 aa7.1□□□□□ -1.27
LSM3P2-201ENST00000551246 ATP6V1AP38606 617 aa7.1□□□□□ -1.27
LSM3P2-201ENST00000551246 SKIV2LQ15477 1246 aaKnown RBP7.1□□□□□ -1.27
LSM3P2-201ENST00000551246 PUS10Q3MIT2 529 aaKnown RBP7.1□□□□□ -1.27
LSM3P2-201ENST00000551246 B4GALNT3Q6L9W6 998 aa7.1□□□□□ -1.27
LSM3P2-201ENST00000551246 HCSTQ9UBK5 93 aa7.1□□□□□ -1.27
LSM3P2-201ENST00000551246 PCDHGC3Q9UN70 934 aa7.1□□□□□ -1.27
LSM3P2-201ENST00000551246 PEG3Q9GZU2 1588 aa7.1□□□□□ -1.27
LSM3P2-201ENST00000551246 SMG6Q86US8 1419 aaKnown RBP7.1□□□□□ -1.27
LSM3P2-201ENST00000551246 ZBED9Q6R2W3 1325 aa7.09□□□□□ -1.27
LSM3P2-201ENST00000551246 CLK2P49760 499 aaKnown RBP7.09□□□□□ -1.27
LSM3P2-201ENST00000551246 FBXO31Q5XUX0 539 aaPredicted RBP7.09□□□□□ -1.27
LSM3P2-201ENST00000551246 BLOC1S3Q6QNY0 202 aa7.09□□□□□ -1.27
LSM3P2-201ENST00000551246 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.09□□□□□ -1.27
LSM3P2-201ENST00000551246 PCDHB3Q9Y5E6 796 aa7.09□□□□□ -1.27
LSM3P2-201ENST00000551246 NEFMP07197 916 aa7.08□□□□□ -1.28
LSM3P2-201ENST00000551246 IRX6P78412 446 aaPredicted RBP7.08□□□□□ -1.28
LSM3P2-201ENST00000551246 TUSC1Q2TAM9 212 aa7.08□□□□□ -1.28
LSM3P2-201ENST00000551246 RIC3Q7Z5B4 369 aa7.08□□□□□ -1.28
LSM3P2-201ENST00000551246 PROCA1Q8NCQ7 364 aaPredicted RBP7.08□□□□□ -1.28
LSM3P2-201ENST00000551246 POLR3EQ9NVU0 708 aa7.08□□□□□ -1.28
LSM3P2-201ENST00000551246 SLC27A5Q9Y2P5 690 aa7.08□□□□□ -1.28
LSM3P2-201ENST00000551246 NCOA2Q15596 1464 aa7.07□□□□□ -1.28
LSM3P2-201ENST00000551246 FDX1P10109 184 aa7.07□□□□□ -1.28
LSM3P2-201ENST00000551246 AAMPQ13685 434 aa7.07□□□□□ -1.28
LSM3P2-201ENST00000551246 TJAP1Q5JTD0 557 aa7.07□□□□□ -1.28
LSM3P2-201ENST00000551246 MTRQ99707 1265 aa7.07□□□□□ -1.28
LSM3P2-201ENST00000551246 PCDHB15Q9Y5E8 787 aa7.07□□□□□ -1.28
LSM3P2-201ENST00000551246 CCNB3Q8WWL7 1395 aa7.07□□□□□ -1.28
LSM3P2-201ENST00000551246 WIZO95785 1651 aa7.06□□□□□ -1.28
LSM3P2-201ENST00000551246 TCERG1O14776 1098 aaKnown RBP7.06□□□□□ -1.28
LSM3P2-201ENST00000551246 UBTFP17480 764 aaKnown RBP7.06□□□□□ -1.28
LSM3P2-201ENST00000551246 HNRNPUQ00839 825 aaKnown RBP eCLIP7.06□□□□□ -1.28
LSM3P2-201ENST00000551246 GRIPAP1Q4V328 841 aa7.06□□□□□ -1.28
LSM3P2-201ENST00000551246 THAP11Q96EK4 314 aa7.06□□□□□ -1.28
LSM3P2-201ENST00000551246 PRDM4Q9UKN5 801 aa7.06□□□□□ -1.28
LSM3P2-201ENST00000551246 RAB3GAP2Q9H2M9 1393 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms