RNA–Protein interactions for RNA: ENST00000551009.5

ATP2B1-208, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 3

Gene ATP2B1, Length 943 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-208ENST00000551009 DDX11L8A8MPP1 907 aa11.75□□□□□ -0.53
ATP2B1-208ENST00000551009 RDH13Q8NBN7 331 aa11.75□□□□□ -0.53
ATP2B1-208ENST00000551009 CD2BP2O95400 341 aaKnown RBP11.74□□□□□ -0.53
ATP2B1-208ENST00000551009 MAP2K5Q13163 448 aa11.74□□□□□ -0.53
ATP2B1-208ENST00000551009 TTC24A2A3L6 582 aaPredicted RBP11.73□□□□□ -0.53
ATP2B1-208ENST00000551009 PUS10Q3MIT2 529 aaKnown RBP11.73□□□□□ -0.53
ATP2B1-208ENST00000551009 ZSCAN1Q8NBB4 408 aa11.73□□□□□ -0.53
ATP2B1-208ENST00000551009 SLC24A1O60721 1099 aa11.72□□□□□ -0.53
ATP2B1-208ENST00000551009 SPSB2Q99619 263 aa11.72□□□□□ -0.53
ATP2B1-208ENST00000551009 SENP2Q9HC62 589 aa11.72□□□□□ -0.53
ATP2B1-208ENST00000551009 SMPD1P17405 629 aa11.71□□□□□ -0.53
ATP2B1-208ENST00000551009 FCF1Q9Y324 198 aaKnown RBP11.71□□□□□ -0.53
ATP2B1-208ENST00000551009 IRF6O14896 467 aa11.7□□□□□ -0.54
ATP2B1-208ENST00000551009 GMPRP36959 345 aa11.7□□□□□ -0.54
ATP2B1-208ENST00000551009 SULF1Q8IWU6 871 aa11.7□□□□□ -0.54
ATP2B1-208ENST00000551009 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.69□□□□□ -0.54
ATP2B1-208ENST00000551009 GCGRP47871 477 aa11.68□□□□□ -0.54
ATP2B1-208ENST00000551009 FUT2Q10981 343 aa11.68□□□□□ -0.54
ATP2B1-208ENST00000551009 MINK1Q8N4C8 1332 aaPredicted RBP11.66□□□□□ -0.54
ATP2B1-208ENST00000551009 MORN1Q5T089 497 aa11.66□□□□□ -0.54
ATP2B1-208ENST00000551009 SLC16A10Q8TF71 515 aa11.66□□□□□ -0.54
ATP2B1-208ENST00000551009 CCDC102AQ96A19 550 aa11.65□□□□□ -0.54
ATP2B1-208ENST00000551009 ATP6V1AP38606 617 aa11.64□□□□□ -0.55
ATP2B1-208ENST00000551009 KIFC2Q96AC6 838 aa11.64□□□□□ -0.55
ATP2B1-208ENST00000551009 SNIP1Q8TAD8 396 aaKnown RBP11.63□□□□□ -0.55
ATP2B1-208ENST00000551009 J3QL48 77 aa11.62□□□□□ -0.55
ATP2B1-208ENST00000551009 MDM2Q00987 491 aaPredicted RBP11.62□□□□□ -0.55
ATP2B1-208ENST00000551009 NXF1Q9UBU9 619 aaKnown RBP11.62□□□□□ -0.55
ATP2B1-208ENST00000551009 CD46P15529 392 aa11.61□□□□□ -0.55
ATP2B1-208ENST00000551009 SLC27A5Q9Y2P5 690 aa11.61□□□□□ -0.55
ATP2B1-208ENST00000551009 WNT7AO00755 349 aa11.6□□□□□ -0.55
ATP2B1-208ENST00000551009 HPS1Q92902 700 aa11.6□□□□□ -0.55
ATP2B1-208ENST00000551009 THAP11Q96EK4 314 aa11.6□□□□□ -0.55
ATP2B1-208ENST00000551009 FAM160A2Q8N612 972 aaPredicted RBP11.59□□□□□ -0.55
ATP2B1-208ENST00000551009 IRF7Q92985 503 aa11.57□□□□□ -0.56
ATP2B1-208ENST00000551009 PRDM9Q9NQV7 894 aa11.56□□□□□ -0.56
ATP2B1-208ENST00000551009 FMNL1O95466 1100 aaPredicted RBP11.55□□□□□ -0.56
ATP2B1-208ENST00000551009 MRGPRX2Q96LB1 330 aa11.55□□□□□ -0.56
ATP2B1-208ENST00000551009 ZBTB24O43167 697 aaPredicted RBP11.54□□□□□ -0.56
ATP2B1-208ENST00000551009 VEGFBP49765 207 aa11.54□□□□□ -0.56
ATP2B1-208ENST00000551009 GRIPAP1Q4V328 841 aa11.54□□□□□ -0.56
ATP2B1-208ENST00000551009 BRICD5Q6PL45 260 aa11.54□□□□□ -0.56
ATP2B1-208ENST00000551009 RNF19BQ6ZMZ0 732 aa11.54□□□□□ -0.56
ATP2B1-208ENST00000551009 GPCPD1Q9NPB8 672 aa11.54□□□□□ -0.56
ATP2B1-208ENST00000551009 SALL2Q9Y467 1007 aaPredicted RBP11.54□□□□□ -0.56
ATP2B1-208ENST00000551009 KDM4AO75164 1064 aa11.53□□□□□ -0.56
ATP2B1-208ENST00000551009 CLCN1P35523 988 aa11.53□□□□□ -0.56
ATP2B1-208ENST00000551009 ERBB4Q15303 1308 aa11.53□□□□□ -0.56
ATP2B1-208ENST00000551009 ZMYND10O75800 440 aa11.52□□□□□ -0.57
ATP2B1-208ENST00000551009 BARGINQ6ZT62 677 aa11.52□□□□□ -0.57
ATP2B1-208ENST00000551009 ZC3H15Q8WU90 426 aaKnown RBP11.52□□□□□ -0.57
ATP2B1-208ENST00000551009 FAM217BQ9NTX9 383 aaPredicted RBP11.52□□□□□ -0.57
ATP2B1-208ENST00000551009 NPAS3Q8IXF0 933 aa11.51□□□□□ -0.57
ATP2B1-208ENST00000551009 KCTD17Q8N5Z5 321 aa11.51□□□□□ -0.57
ATP2B1-208ENST00000551009 KRI1Q8N9T8 703 aaKnown RBP11.51□□□□□ -0.57
ATP2B1-208ENST00000551009 H3BM21 787 aa11.5□□□□□ -0.57
ATP2B1-208ENST00000551009 HLA-CQ95604 372 aa11.5□□□□□ -0.57
ATP2B1-208ENST00000551009 REPIN1Q9BWE0 567 aaKnown RBP11.5□□□□□ -0.57
ATP2B1-208ENST00000551009 TRIM32Q13049 653 aa11.48□□□□□ -0.57
ATP2B1-208ENST00000551009 MSS51Q4VC12 460 aa11.48□□□□□ -0.57
ATP2B1-208ENST00000551009 GSK3AP49840 483 aa11.47□□□□□ -0.57
ATP2B1-208ENST00000551009 USP46P62068 366 aa11.47□□□□□ -0.57
ATP2B1-208ENST00000551009 Q3C1V9 767 aa11.47□□□□□ -0.57
ATP2B1-208ENST00000551009 HOXA2O43364 376 aa11.46□□□□□ -0.57
ATP2B1-208ENST00000551009 KCNMA1Q12791 1236 aa11.44□□□□□ -0.58
ATP2B1-208ENST00000551009 GUCA2AQ02747 115 aa11.43□□□□□ -0.58
ATP2B1-208ENST00000551009 TRIM46Q7Z4K8 759 aa11.43□□□□□ -0.58
ATP2B1-208ENST00000551009 AMHR2Q16671 573 aa11.42□□□□□ -0.58
ATP2B1-208ENST00000551009 USB1Q9BQ65 265 aaKnown RBP11.42□□□□□ -0.58
ATP2B1-208ENST00000551009 BMP1P13497 986 aa11.41□□□□□ -0.58
ATP2B1-208ENST00000551009 SSTR3P32745 418 aaPredicted RBP11.41□□□□□ -0.58
ATP2B1-208ENST00000551009 TTLL12Q14166 644 aaPredicted RBP11.41□□□□□ -0.58
ATP2B1-208ENST00000551009 MMP16P51512 607 aa11.4□□□□□ -0.58
ATP2B1-208ENST00000551009 NUTM1Q86Y26 1132 aa11.4□□□□□ -0.58
ATP2B1-208ENST00000551009 DXOO77932 396 aaKnown RBP11.38□□□□□ -0.59
ATP2B1-208ENST00000551009 GIGYF2Q6Y7W6 1299 aaKnown RBP11.38□□□□□ -0.59
ATP2B1-208ENST00000551009 BCANQ96GW7 911 aa11.38□□□□□ -0.59
ATP2B1-208ENST00000551009 RC3H1Q5TC82 1133 aaKnown RBP11.36□□□□□ -0.59
ATP2B1-208ENST00000551009 SYMPKQ92797 1274 aaKnown RBP11.36□□□□□ -0.59
ATP2B1-208ENST00000551009 SKOR1P84550 965 aa11.35□□□□□ -0.59
ATP2B1-208ENST00000551009 SPIRE2Q8WWL2 714 aa11.35□□□□□ -0.59
ATP2B1-208ENST00000551009 FDX1P10109 184 aa11.34□□□□□ -0.59
ATP2B1-208ENST00000551009 PARP9Q8IXQ6 854 aa11.34□□□□□ -0.59
ATP2B1-208ENST00000551009 PCDHGC3Q9UN70 934 aa11.34□□□□□ -0.59
ATP2B1-208ENST00000551009 TRIM66O15016 1216 aa11.33□□□□□ -0.6
ATP2B1-208ENST00000551009 ALDH1A1P00352 501 aa11.33□□□□□ -0.6
ATP2B1-208ENST00000551009 RETREG3Q86VR2 466 aa11.31□□□□□ -0.6
ATP2B1-208ENST00000551009 TMEM151AQ8N4L1 468 aa11.31□□□□□ -0.6
ATP2B1-208ENST00000551009 AK7Q96M32 723 aa11.31□□□□□ -0.6
ATP2B1-208ENST00000551009 MOXD2PA6NHM9 499 aa11.3□□□□□ -0.6
ATP2B1-208ENST00000551009 CAPN5O15484 640 aaPredicted RBP11.3□□□□□ -0.6
ATP2B1-208ENST00000551009 JUNDP17535 347 aa11.3□□□□□ -0.6
ATP2B1-208ENST00000551009 NDUFV2P19404 249 aa11.3□□□□□ -0.6
ATP2B1-208ENST00000551009 CCDC24Q8N4L8 307 aa11.3□□□□□ -0.6
ATP2B1-208ENST00000551009 BEGAINQ9BUH8 593 aa11.3□□□□□ -0.6
ATP2B1-208ENST00000551009 C6orf229H3BNL8 230 aa11.29□□□□□ -0.6
ATP2B1-208ENST00000551009 VSIG8P0DPA2 414 aa11.28□□□□□ -0.6
ATP2B1-208ENST00000551009 MS4A1P11836 297 aa11.28□□□□□ -0.6
ATP2B1-208ENST00000551009 GDF11O95390 407 aa11.27□□□□□ -0.61
ATP2B1-208ENST00000551009 WNT7BP56706 349 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms