RNA–Protein interactions for RNA: ENST00000550755.5

LETMD1-226, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-226ENST00000550755 MYSM1Q5VVJ2 828 aa11.91□□□□□ -0.5
LETMD1-226ENST00000550755 RSBN1LQ6PCB5 846 aaPredicted RBP11.91□□□□□ -0.5
LETMD1-226ENST00000550755 USB1Q9BQ65 265 aaKnown RBP11.91□□□□□ -0.5
LETMD1-226ENST00000550755 S1PR4O95977 384 aa11.9□□□□□ -0.5
LETMD1-226ENST00000550755 ATP1B4Q9UN42 357 aaPredicted RBP11.9□□□□□ -0.5
LETMD1-226ENST00000550755 SPTLC1O15269 473 aa11.89□□□□□ -0.51
LETMD1-226ENST00000550755 PCDHGC3Q9UN70 934 aa11.89□□□□□ -0.51
LETMD1-226ENST00000550755 MSS51Q4VC12 460 aa11.88□□□□□ -0.51
LETMD1-226ENST00000550755 SPDYE5A6NIY4 337 aa11.87□□□□□ -0.51
LETMD1-226ENST00000550755 RGS20O76081 388 aa11.87□□□□□ -0.51
LETMD1-226ENST00000550755 CLK2P49760 499 aaKnown RBP11.87□□□□□ -0.51
LETMD1-226ENST00000550755 MTMR2Q13614 643 aa11.87□□□□□ -0.51
LETMD1-226ENST00000550755 RETREG3Q86VR2 466 aa11.87□□□□□ -0.51
LETMD1-226ENST00000550755 FAM160A2Q8N612 972 aaPredicted RBP11.87□□□□□ -0.51
LETMD1-226ENST00000550755 CSPP1Q1MSJ5 1256 aa11.86□□□□□ -0.51
LETMD1-226ENST00000550755 IL27Q8NEV9 243 aa11.86□□□□□ -0.51
LETMD1-226ENST00000550755 SYMPKQ92797 1274 aaKnown RBP11.86□□□□□ -0.51
LETMD1-226ENST00000550755 POLR3EQ9NVU0 708 aa11.86□□□□□ -0.51
LETMD1-226ENST00000550755 RNF223E7ERA6 249 aa11.85□□□□□ -0.51
LETMD1-226ENST00000550755 ZBTB3Q9H5J0 574 aa11.85□□□□□ -0.51
LETMD1-226ENST00000550755 PLEKHG3A1L390 1219 aa11.84□□□□□ -0.51
LETMD1-226ENST00000550755 SKIV2LQ15477 1246 aaKnown RBP11.84□□□□□ -0.51
LETMD1-226ENST00000550755 SH3D19Q5HYK7 790 aa11.84□□□□□ -0.51
LETMD1-226ENST00000550755 ANKLE1Q8NAG6 615 aa11.84□□□□□ -0.51
LETMD1-226ENST00000550755 NUTM2BA6NNL0 878 aaPredicted RBP11.83□□□□□ -0.52
LETMD1-226ENST00000550755 NUTM2EB1AL46 878 aaPredicted RBP11.83□□□□□ -0.52
LETMD1-226ENST00000550755 NUTM2DQ5VT03 806 aaPredicted RBP11.83□□□□□ -0.52
LETMD1-226ENST00000550755 PRPF38BQ5VTL8 546 aaKnown RBP11.83□□□□□ -0.52
LETMD1-226ENST00000550755 NUTM2AQ8IVF1 878 aaPredicted RBP11.83□□□□□ -0.52
LETMD1-226ENST00000550755 LIMD1Q9UGP4 676 aa11.83□□□□□ -0.52
LETMD1-226ENST00000550755 PCDHB15Q9Y5E8 787 aa11.83□□□□□ -0.52
LETMD1-226ENST00000550755 PPEF1O14829 653 aaPredicted RBP11.82□□□□□ -0.52
LETMD1-226ENST00000550755 TUSC1Q2TAM9 212 aa11.82□□□□□ -0.52
LETMD1-226ENST00000550755 PRDM9Q9NQV7 894 aa11.82□□□□□ -0.52
LETMD1-226ENST00000550755 HRCP23327 699 aa11.8□□□□□ -0.52
LETMD1-226ENST00000550755 PRR7Q8TB68 274 aa11.8□□□□□ -0.52
LETMD1-226ENST00000550755 JUNDP17535 347 aa11.79□□□□□ -0.52
LETMD1-226ENST00000550755 MMP16P51512 607 aa11.79□□□□□ -0.52
LETMD1-226ENST00000550755 FCF1Q9Y324 198 aaKnown RBP11.79□□□□□ -0.52
LETMD1-226ENST00000550755 DXOO77932 396 aaKnown RBP11.78□□□□□ -0.52
LETMD1-226ENST00000550755 CABLES1Q8TDN4 633 aa11.78□□□□□ -0.52
LETMD1-226ENST00000550755 PRKD2Q9BZL6 878 aa11.78□□□□□ -0.52
LETMD1-226ENST00000550755 GOPCQ9HD26 462 aa11.78□□□□□ -0.52
LETMD1-226ENST00000550755 PCMTD1Q96MG8 357 aaPredicted RBP11.77□□□□□ -0.53
LETMD1-226ENST00000550755 LILRB3O75022 631 aa11.75□□□□□ -0.53
LETMD1-226ENST00000550755 QPCTQ16769 361 aa11.75□□□□□ -0.53
LETMD1-226ENST00000550755 DESI1Q6ICB0 168 aa11.75□□□□□ -0.53
LETMD1-226ENST00000550755 CCDC24Q8N4L8 307 aa11.75□□□□□ -0.53
LETMD1-226ENST00000550755 TSC1Q92574 1164 aa11.75□□□□□ -0.53
LETMD1-226ENST00000550755 V9GY48 417 aaPredicted RBP11.75□□□□□ -0.53
LETMD1-226ENST00000550755 ZBTB24O43167 697 aaPredicted RBP11.74□□□□□ -0.53
LETMD1-226ENST00000550755 SLC19A1P41440 591 aa11.74□□□□□ -0.53
LETMD1-226ENST00000550755 PROCA1Q8NCQ7 364 aaPredicted RBP11.74□□□□□ -0.53
LETMD1-226ENST00000550755 HELBQ8NG08 1087 aaPredicted RBP11.73□□□□□ -0.53
LETMD1-226ENST00000550755 NUDT12Q9BQG2 462 aa11.72□□□□□ -0.53
LETMD1-226ENST00000550755 CFAP99D6REC4 459 aa11.71□□□□□ -0.53
LETMD1-226ENST00000550755 PTPRNQ16849 979 aa11.7□□□□□ -0.54
LETMD1-226ENST00000550755 RTL5Q5HYW3 569 aaPredicted RBP11.7□□□□□ -0.54
LETMD1-226ENST00000550755 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.7□□□□□ -0.54
LETMD1-226ENST00000550755 CD2BP2O95400 341 aaKnown RBP11.69□□□□□ -0.54
LETMD1-226ENST00000550755 CCNYL3P0C7X3 344 aa11.69□□□□□ -0.54
LETMD1-226ENST00000550755 RPIAP49247 311 aa11.69□□□□□ -0.54
LETMD1-226ENST00000550755 PLA2G2CQ5R387 149 aa11.68□□□□□ -0.54
LETMD1-226ENST00000550755 LIAT1Q6ZQX7 453 aa11.68□□□□□ -0.54
LETMD1-226ENST00000550755 SPRYD7Q5W111 196 aa11.66□□□□□ -0.54
LETMD1-226ENST00000550755 PPP2R2DQ66LE6 453 aa11.66□□□□□ -0.54
LETMD1-226ENST00000550755 LYPD8Q6UX82 237 aa11.66□□□□□ -0.54
LETMD1-226ENST00000550755 CTHP32929 405 aa11.65□□□□□ -0.54
LETMD1-226ENST00000550755 ZNF598Q86UK7 904 aaKnown RBP11.64□□□□□ -0.55
LETMD1-226ENST00000550755 EVA1BQ9NVM1 165 aa11.64□□□□□ -0.55
LETMD1-226ENST00000550755 EMID1Q96A84 441 aaPredicted RBP11.63□□□□□ -0.55
LETMD1-226ENST00000550755 KCNH2Q12809 1159 aa11.62□□□□□ -0.55
LETMD1-226ENST00000550755 ZNF697Q5TEC3 545 aa11.62□□□□□ -0.55
LETMD1-226ENST00000550755 AP1G2O75843 785 aa11.61□□□□□ -0.55
LETMD1-226ENST00000550755 RFC5P40937 340 aa11.61□□□□□ -0.55
LETMD1-226ENST00000550755 TRIM32Q13049 653 aa11.61□□□□□ -0.55
LETMD1-226ENST00000550755 TMEM259Q4ZIN3 620 aa11.6□□□□□ -0.55
LETMD1-226ENST00000550755 PER1O15534 1290 aaPredicted RBP11.59□□□□□ -0.55
LETMD1-226ENST00000550755 CTDSPL2Q05D32 466 aa11.59□□□□□ -0.55
LETMD1-226ENST00000550755 IRX2Q9BZI1 471 aaPredicted RBP11.59□□□□□ -0.55
LETMD1-226ENST00000550755 PTCRAQ6ISU1 281 aaPredicted RBP11.58□□□□□ -0.56
LETMD1-226ENST00000550755 UNC93B1Q9H1C4 597 aa11.58□□□□□ -0.56
LETMD1-226ENST00000550755 FBXO31Q5XUX0 539 aaPredicted RBP11.57□□□□□ -0.56
LETMD1-226ENST00000550755 MAP10Q9P2G4 905 aa11.56□□□□□ -0.56
LETMD1-226ENST00000550755 F12P00748 615 aaPredicted RBP11.55□□□□□ -0.56
LETMD1-226ENST00000550755 WNT7BP56706 349 aa11.55□□□□□ -0.56
LETMD1-226ENST00000550755 FOXC1Q12948 553 aa11.55□□□□□ -0.56
LETMD1-226ENST00000550755 PDZRN3Q9UPQ7 1066 aa11.55□□□□□ -0.56
LETMD1-226ENST00000550755 LAPTM4AQ15012 233 aa11.54□□□□□ -0.56
LETMD1-226ENST00000550755 ARMC2Q8NEN0 867 aa11.54□□□□□ -0.56
LETMD1-226ENST00000550755 GFRA3O60609 400 aa11.53□□□□□ -0.56
LETMD1-226ENST00000550755 USP17L8P0C7I0 530 aa11.53□□□□□ -0.56
LETMD1-226ENST00000550755 LRRN4Q8WUT4 740 aa11.53□□□□□ -0.56
LETMD1-226ENST00000550755 LINC01559Q495D7 138 aa11.51□□□□□ -0.57
LETMD1-226ENST00000550755 PNMA1Q8ND90 353 aa11.51□□□□□ -0.57
LETMD1-226ENST00000550755 BAP1Q92560 729 aa11.51□□□□□ -0.57
LETMD1-226ENST00000550755 TNFRSF10AO00220 468 aa11.5□□□□□ -0.57
LETMD1-226ENST00000550755 WNT7AO00755 349 aa11.5□□□□□ -0.57
LETMD1-226ENST00000550755 PRR20EP86478 221 aa11.5□□□□□ -0.57
LETMD1-226ENST00000550755 PRR20CP86479 221 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms