RNA–Protein interactions for RNA: ENST00000550600.5

KRT18-207, Transcript of keratin 18, humanhuman

TSL 1 (best) BASIC

Gene KRT18, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-207ENST00000550600 GTF3C3Q9Y5Q9 886 aa26.34■■□□□ 1.81
KRT18-207ENST00000550600 KNDC1Q76NI1 1749 aa26.34■■□□□ 1.81
KRT18-207ENST00000550600 RIMS1Q86UR5 1692 aaKnown RBP26.33■■□□□ 1.81
KRT18-207ENST00000550600 TECPR2O15040 1411 aa26.33■■□□□ 1.81
KRT18-207ENST00000550600 FAM135BQ49AJ0 1406 aa26.33■■□□□ 1.81
KRT18-207ENST00000550600 SENP3Q9H4L4 574 aaPredicted RBP26.32■■□□□ 1.8
KRT18-207ENST00000550600 SAFB2Q14151 953 aaKnown RBP eCLIP26.31■■□□□ 1.8
KRT18-207ENST00000550600 METP08581 1390 aa26.3■■□□□ 1.8
KRT18-207ENST00000550600 LTKP29376 864 aa26.3■■□□□ 1.8
KRT18-207ENST00000550600 SRPK2P78362 688 aaKnown RBP26.3■■□□□ 1.8
KRT18-207ENST00000550600 SETD1BQ9UPS6 1966 aaKnown RBP26.3■■□□□ 1.8
KRT18-207ENST00000550600 ANKRD36BQ8N2N9 1353 aa26.29■■□□□ 1.8
KRT18-207ENST00000550600 SLC12A5Q9H2X9 1139 aa26.29■■□□□ 1.8
KRT18-207ENST00000550600 INSRP06213 1382 aa26.29■■□□□ 1.8
KRT18-207ENST00000550600 CARD14Q9BXL6 1004 aa26.28■■□□□ 1.8
KRT18-207ENST00000550600 ADAMTS13Q76LX8 1427 aa26.28■■□□□ 1.8
KRT18-207ENST00000550600 ZBED9Q6R2W3 1325 aa26.28■■□□□ 1.8
KRT18-207ENST00000550600 MINK1Q8N4C8 1332 aaPredicted RBP26.28■■□□□ 1.8
KRT18-207ENST00000550600 USP32Q8NFA0 1604 aa26.27■■□□□ 1.8
KRT18-207ENST00000550600 PLPPR3Q6T4P5 718 aa26.27■■□□□ 1.8
KRT18-207ENST00000550600 CABP2Q9NPB3 220 aa26.27■■□□□ 1.8
KRT18-207ENST00000550600 MED14O60244 1454 aa26.27■■□□□ 1.8
KRT18-207ENST00000550600 CPS1P31327 1500 aa26.26■■□□□ 1.8
KRT18-207ENST00000550600 CEP170BQ9Y4F5 1589 aaPredicted RBP26.26■■□□□ 1.79
KRT18-207ENST00000550600 TBX22Q9Y458 520 aa26.25■■□□□ 1.79
KRT18-207ENST00000550600 DIP2AQ14689 1571 aa26.25■■□□□ 1.79
KRT18-207ENST00000550600 PPP2R1AP30153 589 aa26.24■■□□□ 1.79
KRT18-207ENST00000550600 CDK19Q9BWU1 502 aa26.24■■□□□ 1.79
KRT18-207ENST00000550600 TERF2IPQ9NYB0 399 aa26.24■■□□□ 1.79
KRT18-207ENST00000550600 NSD3Q9BZ95 1437 aa26.23■■□□□ 1.79
KRT18-207ENST00000550600 CGNL1Q0VF96 1302 aa26.23■■□□□ 1.79
KRT18-207ENST00000550600 NSD2O96028 1365 aa26.23■■□□□ 1.79
KRT18-207ENST00000550600 WAPLQ7Z5K2 1190 aa26.21■■□□□ 1.79
KRT18-207ENST00000550600 ZNF142P52746 1687 aaPredicted RBP26.21■■□□□ 1.79
KRT18-207ENST00000550600 PLEKHH1Q9ULM0 1364 aa26.17■■□□□ 1.78
KRT18-207ENST00000550600 HDGFL2Q7Z4V5 671 aaPredicted RBP26.17■■□□□ 1.78
KRT18-207ENST00000550600 WASLO00401 505 aaPredicted RBP26.16■■□□□ 1.78
KRT18-207ENST00000550600 PIK3R4Q99570 1358 aa26.15■■□□□ 1.78
KRT18-207ENST00000550600 MORC1Q86VD1 984 aa26.15■■□□□ 1.78
KRT18-207ENST00000550600 ANKLE2Q86XL3 938 aa26.14■■□□□ 1.78
KRT18-207ENST00000550600 A0A1W2PP64 1363 aa26.12■■□□□ 1.77
KRT18-207ENST00000550600 ATP7BP35670 1465 aa26.12■■□□□ 1.77
KRT18-207ENST00000550600 SLC26A8Q96RN1 970 aa26.12■■□□□ 1.77
KRT18-207ENST00000550600 ROBO2Q9HCK4 1378 aa26.1■■□□□ 1.77
KRT18-207ENST00000550600 PTCH1Q13635 1447 aa26.1■■□□□ 1.77
KRT18-207ENST00000550600 ADGRB2O60241 1585 aa26.1■■□□□ 1.77
KRT18-207ENST00000550600 WDR43Q15061 677 aaKnown RBP eCLIP26.09■■□□□ 1.773e-6■□□□□ 9
KRT18-207ENST00000550600 CABP1Q9NZU7 370 aa26.09■■□□□ 1.77
KRT18-207ENST00000550600 AMOTL2Q9Y2J4 779 aa26.09■■□□□ 1.77
KRT18-207ENST00000550600 CD163L1Q9NR16 1453 aa26.07■■□□□ 1.76
KRT18-207ENST00000550600 POLR3AO14802 1390 aaPredicted RBP26.07■■□□□ 1.76
KRT18-207ENST00000550600 PTPRUQ92729 1446 aa26.06■■□□□ 1.76
KRT18-207ENST00000550600 BLMP54132 1417 aaPredicted RBP26.06■■□□□ 1.76
KRT18-207ENST00000550600 CCDC61Q9Y6R9 512 aa26.06■■□□□ 1.76
KRT18-207ENST00000550600 NUDT16Q96DE0 195 aaKnown RBP26.04■■□□□ 1.76
KRT18-207ENST00000550600 PPIP5K1Q6PFW1 1433 aa26.02■■□□□ 1.76
KRT18-207ENST00000550600 NEFLP07196 543 aa26.01■■□□□ 1.75
KRT18-207ENST00000550600 PDE3BQ13370 1112 aa26.01■■□□□ 1.75
KRT18-207ENST00000550600 ZNF692Q9BU19 519 aaPredicted RBP26.01■■□□□ 1.75
KRT18-207ENST00000550600 XRN1Q8IZH2 1706 aaKnown RBP26■■□□□ 1.75
KRT18-207ENST00000550600 ANKRD26Q9UPS8 1709 aa26■■□□□ 1.75
KRT18-207ENST00000550600 CFAP53Q96M91 514 aa26■■□□□ 1.75
KRT18-207ENST00000550600 SIPA1L2Q9P2F8 1722 aaPredicted RBP26■■□□□ 1.75
KRT18-207ENST00000550600 ADAMTS8Q9UP79 889 aa25.99■■□□□ 1.75
KRT18-207ENST00000550600 CPSF1Q10570 1443 aaKnown RBP25.99■■□□□ 1.75
KRT18-207ENST00000550600 SMG6Q86US8 1419 aaKnown RBP25.98■■□□□ 1.75
KRT18-207ENST00000550600 FYB1O15117 783 aa25.97■■□□□ 1.75
KRT18-207ENST00000550600 EDC4Q6P2E9 1401 aaKnown RBP25.97■■□□□ 1.75
KRT18-207ENST00000550600 CDC42BPGQ6DT37 1551 aa25.97■■□□□ 1.75
KRT18-207ENST00000550600 KIF20BQ96Q89 1820 aa25.95■■□□□ 1.74
KRT18-207ENST00000550600 NGEFQ8N5V2 710 aa25.95■■□□□ 1.74
KRT18-207ENST00000550600 NUDCQ9Y266 331 aa25.93■■□□□ 1.74
KRT18-207ENST00000550600 PLEKHG3A1L390 1219 aa25.93■■□□□ 1.74
KRT18-207ENST00000550600 CHD2O14647 1828 aaKnown RBP25.92■■□□□ 1.74
KRT18-207ENST00000550600 MTHFSP49914 203 aa25.92■■□□□ 1.74
KRT18-207ENST00000550600 NPHP4O75161 1426 aaPredicted RBP25.91■■□□□ 1.74
KRT18-207ENST00000550600 ITSN1Q15811 1721 aa25.91■■□□□ 1.74
KRT18-207ENST00000550600 TNNT2P45379 298 aaPredicted RBP25.91■■□□□ 1.74
KRT18-207ENST00000550600 GGNBP2Q9H3C7 697 aa25.91■■□□□ 1.74
KRT18-207ENST00000550600 AKAP12Q02952 1782 aa25.91■■□□□ 1.74
KRT18-207ENST00000550600 MON2Q7Z3U7 1717 aa25.89■■□□□ 1.74
KRT18-207ENST00000550600 TOPAZ1Q8N9V7 1692 aa25.89■■□□□ 1.73
KRT18-207ENST00000550600 KCNA6P17658 529 aa25.89■■□□□ 1.73
KRT18-207ENST00000550600 PRR36Q9H6K5 1346 aa25.89■■□□□ 1.73
KRT18-207ENST00000550600 SUPT16HQ9Y5B9 1047 aaKnown RBP25.87■■□□□ 1.73
KRT18-207ENST00000550600 ANKARQ7Z5J8 1434 aa25.86■■□□□ 1.73
KRT18-207ENST00000550600 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.83■■□□□ 1.73
KRT18-207ENST00000550600 FKBP8Q14318 412 aa25.82■■□□□ 1.72
KRT18-207ENST00000550600 ERICH6BQ5W0A0 696 aa25.82■■□□□ 1.72
KRT18-207ENST00000550600 SHPRHQ149N8 1683 aa25.82■■□□□ 1.72
KRT18-207ENST00000550600 ACEP12821 1306 aa25.8■■□□□ 1.72
KRT18-207ENST00000550600 COG3Q96JB2 828 aa25.8■■□□□ 1.72
KRT18-207ENST00000550600 AATKQ6ZMQ8 1374 aa25.78■■□□□ 1.72
KRT18-207ENST00000550600 NCKAP5LQ9HCH0 1330 aa25.78■■□□□ 1.72
KRT18-207ENST00000550600 NCBP3Q53F19 620 aaKnown RBP25.78■■□□□ 1.72
KRT18-207ENST00000550600 SALL2Q9Y467 1007 aaPredicted RBP25.77■■□□□ 1.72
KRT18-207ENST00000550600 PNPLA6Q8IY17 1366 aa25.77■■□□□ 1.72
KRT18-207ENST00000550600 FMN2Q9NZ56 1722 aa25.77■■□□□ 1.72
KRT18-207ENST00000550600 RUNDC1Q96C34 613 aa25.77■■□□□ 1.72
KRT18-207ENST00000550600 USP6P35125 1406 aa25.76■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms