RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 PLEKHH1Q9ULM0 1364 aa27.73■■■□□ 2.03
DDX54-207ENST00000550016 NBPF8Q3BBV2 869 aa27.72■■■□□ 2.03
DDX54-207ENST00000550016 ARHGEF28Q8N1W1 1705 aaKnown RBP27.72■■■□□ 2.03
DDX54-207ENST00000550016 PRAM1Q96QH2 718 aa27.71■■■□□ 2.03
DDX54-207ENST00000550016 POGKQ9P215 609 aa27.71■■■□□ 2.03
DDX54-207ENST00000550016 TIMELESSQ9UNS1 1208 aa27.7■■■□□ 2.02
DDX54-207ENST00000550016 ROBO1Q9Y6N7 1651 aa27.68■■■□□ 2.02
DDX54-207ENST00000550016 CDC42BPGQ6DT37 1551 aa27.66■■■□□ 2.02
DDX54-207ENST00000550016 SAFB2Q14151 953 aaKnown RBP eCLIP27.66■■■□□ 2.02
DDX54-207ENST00000550016 MST1RQ04912 1400 aa27.65■■■□□ 2.02
DDX54-207ENST00000550016 ROCK2O75116 1388 aaKnown RBP27.64■■■□□ 2.02
DDX54-207ENST00000550016 FMN2Q9NZ56 1722 aa27.61■■■□□ 2.01
DDX54-207ENST00000550016 RALGAPBQ86X10 1494 aa27.6■■■□□ 2.01
DDX54-207ENST00000550016 HSPA1LP34931 641 aa27.6■■■□□ 2.01
DDX54-207ENST00000550016 GPRASP1Q5JY77 1395 aa27.59■■■□□ 2.01
DDX54-207ENST00000550016 ADGRB2O60241 1585 aa27.58■■■□□ 2.01
DDX54-207ENST00000550016 C1orf167Q5SNV9 1468 aa27.57■■■□□ 2
DDX54-207ENST00000550016 MINK1Q8N4C8 1332 aaPredicted RBP27.57■■■□□ 2
DDX54-207ENST00000550016 RGPD8O14715 1765 aaPredicted RBP27.56■■■□□ 2
DDX54-207ENST00000550016 BRINP3Q76B58 766 aa27.56■■■□□ 2
DDX54-207ENST00000550016 PHLPP1O60346 1717 aa27.54■■■□□ 2
DDX54-207ENST00000550016 CARD11Q9BXL7 1154 aa27.54■■■□□ 2
DDX54-207ENST00000550016 QRICH2Q9H0J4 1663 aa27.53■■■□□ 2
DDX54-207ENST00000550016 CENPJQ9HC77 1338 aaPredicted RBP27.53■■■□□ 2
DDX54-207ENST00000550016 HIRIP3Q9BW71 556 aaPredicted RBP27.53■■■□□ 2
DDX54-207ENST00000550016 NUTM2FA1L443 756 aa27.51■■□□□ 1.99
DDX54-207ENST00000550016 ORAI2Q96SN7 254 aa27.5■■□□□ 1.99
DDX54-207ENST00000550016 EIF3AQ14152 1382 aaKnown RBP27.49■■□□□ 1.99
DDX54-207ENST00000550016 AHDC1Q5TGY3 1603 aaPredicted RBP27.49■■□□□ 1.99
DDX54-207ENST00000550016 WASLO00401 505 aaPredicted RBP27.49■■□□□ 1.99
DDX54-207ENST00000550016 NHSL1Q5SYE7 1610 aa27.49■■□□□ 1.99
DDX54-207ENST00000550016 ESCO1Q5FWF5 840 aa27.47■■□□□ 1.99
DDX54-207ENST00000550016 USP32Q8NFA0 1604 aa27.45■■□□□ 1.99
DDX54-207ENST00000550016 ANKARQ7Z5J8 1434 aa27.45■■□□□ 1.98
DDX54-207ENST00000550016 TULP4Q9NRJ4 1543 aa27.43■■□□□ 1.98
DDX54-207ENST00000550016 COL16A1Q07092 1604 aaPredicted RBP27.43■■□□□ 1.98
DDX54-207ENST00000550016 KIF1AQ12756 1690 aa27.43■■□□□ 1.98
DDX54-207ENST00000550016 CDK19Q9BWU1 502 aa27.42■■□□□ 1.98
DDX54-207ENST00000550016 DDX17Q92841 729 aaKnown RBP27.4■■□□□ 1.98
DDX54-207ENST00000550016 ITSN1Q15811 1721 aa27.4■■□□□ 1.98
DDX54-207ENST00000550016 PRR36Q9H6K5 1346 aa27.38■■□□□ 1.97
DDX54-207ENST00000550016 PHF8Q9UPP1 1060 aa27.37■■□□□ 1.97
DDX54-207ENST00000550016 NUDT16Q96DE0 195 aaKnown RBP27.36■■□□□ 1.97
DDX54-207ENST00000550016 NPHP3Q7Z494 1330 aa27.36■■□□□ 1.97
DDX54-207ENST00000550016 FOXO3O43524 673 aa27.35■■□□□ 1.97
DDX54-207ENST00000550016 EVC2Q86UK5 1308 aa27.35■■□□□ 1.97
DDX54-207ENST00000550016 SBNO2Q9Y2G9 1366 aa27.35■■□□□ 1.97
DDX54-207ENST00000550016 ATP7BP35670 1465 aa27.33■■□□□ 1.97
DDX54-207ENST00000550016 SRPK2P78362 688 aaKnown RBP27.33■■□□□ 1.97
DDX54-207ENST00000550016 SOS2Q07890 1332 aaPredicted RBP27.33■■□□□ 1.97
DDX54-207ENST00000550016 LRRC59Q96AG4 307 aaKnown RBP27.32■■□□□ 1.96
DDX54-207ENST00000550016 TOPAZ1Q8N9V7 1692 aa27.32■■□□□ 1.96
DDX54-207ENST00000550016 JCADQ9P266 1359 aa27.32■■□□□ 1.96
DDX54-207ENST00000550016 SHPRHQ149N8 1683 aa27.31■■□□□ 1.96
DDX54-207ENST00000550016 ST20-MTHFSA0A0A6YYL1 179 aa27.31■■□□□ 1.96
DDX54-207ENST00000550016 PMFBP1Q8TBY8 1022 aa27.31■■□□□ 1.96
DDX54-207ENST00000550016 USP47Q96K76 1375 aa27.31■■□□□ 1.96
DDX54-207ENST00000550016 CABP2Q9NPB3 220 aa27.3■■□□□ 1.96
DDX54-207ENST00000550016 CCDC61Q9Y6R9 512 aa27.3■■□□□ 1.96
DDX54-207ENST00000550016 PXDNQ92626 1479 aa27.29■■□□□ 1.96
DDX54-207ENST00000550016 XPCQ01831 940 aaPredicted RBP27.27■■□□□ 1.96
DDX54-207ENST00000550016 KRT28Q7Z3Y7 464 aa27.27■■□□□ 1.96
DDX54-207ENST00000550016 SLC24A1O60721 1099 aa27.26■■□□□ 1.95
DDX54-207ENST00000550016 PSME1Q06323 249 aa27.26■■□□□ 1.95
DDX54-207ENST00000550016 NGDNQ8NEJ9 315 aaKnown RBP27.25■■□□□ 1.95
DDX54-207ENST00000550016 TESK2Q96S53 571 aa27.25■■□□□ 1.95
DDX54-207ENST00000550016 PLEKHG3A1L390 1219 aa27.23■■□□□ 1.95
DDX54-207ENST00000550016 PPIP5K1Q6PFW1 1433 aa27.22■■□□□ 1.95
DDX54-207ENST00000550016 SPATA31A6Q5VVP1 1343 aa27.2■■□□□ 1.95
DDX54-207ENST00000550016 PNPLA6Q8IY17 1366 aa27.2■■□□□ 1.94
DDX54-207ENST00000550016 TRPM3Q9HCF6 1732 aaPredicted RBP27.19■■□□□ 1.94
DDX54-207ENST00000550016 MED1Q15648 1581 aaPredicted RBP27.19■■□□□ 1.94
DDX54-207ENST00000550016 POLR3AO14802 1390 aaPredicted RBP27.19■■□□□ 1.94
DDX54-207ENST00000550016 ATAD2Q6PL18 1390 aa27.19■■□□□ 1.94
DDX54-207ENST00000550016 ACEP12821 1306 aa27.18■■□□□ 1.94
DDX54-207ENST00000550016 PUS7Q96PZ0 661 aaKnown RBP27.18■■□□□ 1.94
DDX54-207ENST00000550016 CABP1Q9NZU7 370 aa27.18■■□□□ 1.94
DDX54-207ENST00000550016 SBNO1A3KN83 1393 aa27.18■■□□□ 1.94
DDX54-207ENST00000550016 SPATA31A3Q5VYP0 1347 aa27.17■■□□□ 1.94
DDX54-207ENST00000550016 COL22A1Q8NFW1 1626 aaPredicted RBP27.16■■□□□ 1.94
DDX54-207ENST00000550016 EIF4G2P78344 907 aaKnown RBP eCLIP27.16■■□□□ 1.943e-8■■■■□ 20.3
DDX54-207ENST00000550016 TMF1P82094 1093 aa27.14■■□□□ 1.94
DDX54-207ENST00000550016 TNS3Q68CZ2 1445 aa27.14■■□□□ 1.93
DDX54-207ENST00000550016 AKAP12Q02952 1782 aa27.12■■□□□ 1.93
DDX54-207ENST00000550016 ALS2Q96Q42 1657 aa27.12■■□□□ 1.93
DDX54-207ENST00000550016 NUTM2BA6NNL0 878 aaPredicted RBP27.11■■□□□ 1.93
DDX54-207ENST00000550016 NUTM2EB1AL46 878 aaPredicted RBP27.11■■□□□ 1.93
DDX54-207ENST00000550016 HSPA5P11021 654 aaKnown RBP27.11■■□□□ 1.93
DDX54-207ENST00000550016 NUTM2AQ8IVF1 878 aaPredicted RBP27.11■■□□□ 1.93
DDX54-207ENST00000550016 DISP3Q9P2K9 1392 aa27.1■■□□□ 1.93
DDX54-207ENST00000550016 ARHGEF10O15013 1369 aa27.09■■□□□ 1.93
DDX54-207ENST00000550016 LRP6O75581 1613 aa27.09■■□□□ 1.93
DDX54-207ENST00000550016 PAK3O75914 559 aaPredicted RBP27.09■■□□□ 1.93
DDX54-207ENST00000550016 LMOD2Q6P5Q4 547 aa27.09■■□□□ 1.93
DDX54-207ENST00000550016 CDCA8Q53HL2 280 aa27.08■■□□□ 1.93
DDX54-207ENST00000550016 TMC1Q8TDI8 760 aa27.07■■□□□ 1.92
DDX54-207ENST00000550016 ZNF692Q9BU19 519 aaPredicted RBP27.07■■□□□ 1.92
DDX54-207ENST00000550016 BRD4O60885 1362 aaPredicted RBP27.07■■□□□ 1.92
DDX54-207ENST00000550016 MEX3CQ5U5Q3 659 aaKnown RBP27.05■■□□□ 1.92
DDX54-207ENST00000550016 USP6P35125 1406 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms