RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 KIAA1210Q9ULL0 1709 aa22.37■■□□□ 1.17
SSH1-204ENST00000546697 SHPRHQ149N8 1683 aa22.37■■□□□ 1.17
SSH1-204ENST00000546697 PLEKHH1Q9ULM0 1364 aa22.37■■□□□ 1.17
SSH1-204ENST00000546697 ADGRB2O60241 1585 aa22.34■■□□□ 1.17
SSH1-204ENST00000546697 TRIM26Q12899 539 aaPredicted RBP22.34■■□□□ 1.17
SSH1-204ENST00000546697 WAPLQ7Z5K2 1190 aa22.34■■□□□ 1.17
SSH1-204ENST00000546697 STK26Q9P289 416 aa22.33■■□□□ 1.17
SSH1-204ENST00000546697 FMN2Q9NZ56 1722 aa22.33■■□□□ 1.17
SSH1-204ENST00000546697 SPATA31A6Q5VVP1 1343 aa22.32■■□□□ 1.16
SSH1-204ENST00000546697 SOS2Q07890 1332 aaPredicted RBP22.31■■□□□ 1.16
SSH1-204ENST00000546697 KDM2AQ9Y2K7 1162 aa22.28■■□□□ 1.16
SSH1-204ENST00000546697 LRRC59Q96AG4 307 aaKnown RBP22.27■■□□□ 1.16
SSH1-204ENST00000546697 ORAI2Q96SN7 254 aa22.27■■□□□ 1.16
SSH1-204ENST00000546697 PRAM1Q96QH2 718 aa22.26■■□□□ 1.15
SSH1-204ENST00000546697 LRP6O75581 1613 aa22.25■■□□□ 1.15
SSH1-204ENST00000546697 RGS17Q9UGC6 210 aaPredicted RBP22.25■■□□□ 1.15
SSH1-204ENST00000546697 ARHGEF28Q8N1W1 1705 aaKnown RBP22.25■■□□□ 1.15
SSH1-204ENST00000546697 ANKARQ7Z5J8 1434 aa22.24■■□□□ 1.15
SSH1-204ENST00000546697 PXDNQ92626 1479 aa22.24■■□□□ 1.15
SSH1-204ENST00000546697 KIF1AQ12756 1690 aa22.23■■□□□ 1.15
SSH1-204ENST00000546697 PNPLA6Q8IY17 1366 aa22.23■■□□□ 1.15
SSH1-204ENST00000546697 NPHP3Q7Z494 1330 aa22.22■■□□□ 1.15
SSH1-204ENST00000546697 COL22A1Q8NFW1 1626 aaPredicted RBP22.21■■□□□ 1.15
SSH1-204ENST00000546697 L3MBTL2Q969R5 705 aa22.21■■□□□ 1.15
SSH1-204ENST00000546697 TRAK1Q9UPV9 953 aa22.2■■□□□ 1.14
SSH1-204ENST00000546697 USP32Q8NFA0 1604 aa22.2■■□□□ 1.14
SSH1-204ENST00000546697 DDX17Q92841 729 aaKnown RBP22.19■■□□□ 1.14
SSH1-204ENST00000546697 ESCO1Q5FWF5 840 aa22.18■■□□□ 1.14
SSH1-204ENST00000546697 SIN3AQ96ST3 1273 aa22.18■■□□□ 1.14
SSH1-204ENST00000546697 PHF23Q9BUL5 403 aaPredicted RBP22.18■■□□□ 1.14
SSH1-204ENST00000546697 EIF3AQ14152 1382 aaKnown RBP22.17■■□□□ 1.14
SSH1-204ENST00000546697 POGKQ9P215 609 aa22.17■■□□□ 1.14
SSH1-204ENST00000546697 TULP4Q9NRJ4 1543 aa22.16■■□□□ 1.14
SSH1-204ENST00000546697 TRPM1Q7Z4N2 1603 aa22.15■■□□□ 1.14
SSH1-204ENST00000546697 NBPF1Q3BBV0 1214 aa22.14■■□□□ 1.13
SSH1-204ENST00000546697 RGPD8O14715 1765 aaPredicted RBP22.14■■□□□ 1.13
SSH1-204ENST00000546697 WASLO00401 505 aaPredicted RBP22.13■■□□□ 1.13
SSH1-204ENST00000546697 GPRASP1Q5JY77 1395 aa22.12■■□□□ 1.13
SSH1-204ENST00000546697 FOXO3O43524 673 aa22.12■■□□□ 1.13
SSH1-204ENST00000546697 PHF8Q9UPP1 1060 aa22.11■■□□□ 1.13
SSH1-204ENST00000546697 SAFB2Q14151 953 aaKnown RBP eCLIP22.1■■□□□ 1.13
SSH1-204ENST00000546697 ATP7BP35670 1465 aa22.09■■□□□ 1.13
SSH1-204ENST00000546697 PRR36Q9H6K5 1346 aa22.09■■□□□ 1.13
SSH1-204ENST00000546697 SBNO1A3KN83 1393 aa22.09■■□□□ 1.13
SSH1-204ENST00000546697 SPATA31A3Q5VYP0 1347 aa22.08■■□□□ 1.13
SSH1-204ENST00000546697 NUTM2FA1L443 756 aa22.08■■□□□ 1.13
SSH1-204ENST00000546697 POTEAQ6S8J7 498 aa22.08■■□□□ 1.13
SSH1-204ENST00000546697 MINK1Q8N4C8 1332 aaPredicted RBP22.07■■□□□ 1.12
SSH1-204ENST00000546697 TOPAZ1Q8N9V7 1692 aa22.05■■□□□ 1.12
SSH1-204ENST00000546697 NEUROD1Q13562 356 aa22.05■■□□□ 1.12
SSH1-204ENST00000546697 ZNF772Q68DY9 489 aaPredicted RBP22.05■■□□□ 1.12
SSH1-204ENST00000546697 HIRIP3Q9BW71 556 aaPredicted RBP22.05■■□□□ 1.12
SSH1-204ENST00000546697 ITSN1Q15811 1721 aa22.05■■□□□ 1.12
SSH1-204ENST00000546697 TNS3Q68CZ2 1445 aa22.05■■□□□ 1.12
SSH1-204ENST00000546697 TRPM3Q9HCF6 1732 aaPredicted RBP22.04■■□□□ 1.12
SSH1-204ENST00000546697 KRT28Q7Z3Y7 464 aa22.03■■□□□ 1.12
SSH1-204ENST00000546697 CENPJQ9HC77 1338 aaPredicted RBP22.03■■□□□ 1.12
SSH1-204ENST00000546697 PSME1Q06323 249 aa22.02■■□□□ 1.12
SSH1-204ENST00000546697 NBPF8Q3BBV2 869 aa22.02■■□□□ 1.12
SSH1-204ENST00000546697 RALGAPBQ86X10 1494 aa22.01■■□□□ 1.11
SSH1-204ENST00000546697 CLSPNQ9HAW4 1339 aa22.01■■□□□ 1.11
SSH1-204ENST00000546697 POLR3AO14802 1390 aaPredicted RBP22■■□□□ 1.11
SSH1-204ENST00000546697 SBNO2Q9Y2G9 1366 aa22■■□□□ 1.11
SSH1-204ENST00000546697 MARF1Q9Y4F3 1742 aaKnown RBP22■■□□□ 1.11
SSH1-204ENST00000546697 MEX3CQ5U5Q3 659 aaKnown RBP22■■□□□ 1.11
SSH1-204ENST00000546697 FNBP4Q8N3X1 1017 aaPredicted RBP22■■□□□ 1.11
SSH1-204ENST00000546697 ALS2Q96Q42 1657 aa22■■□□□ 1.11
SSH1-204ENST00000546697 QRICH2Q9H0J4 1663 aa22■■□□□ 1.11
SSH1-204ENST00000546697 ARHGEF10O15013 1369 aa21.99■■□□□ 1.11
SSH1-204ENST00000546697 ROCK2O75116 1388 aaKnown RBP21.99■■□□□ 1.11
SSH1-204ENST00000546697 CDK12Q9NYV4 1490 aaPredicted RBP21.99■■□□□ 1.11
SSH1-204ENST00000546697 NUTM2BA6NNL0 878 aaPredicted RBP21.99■■□□□ 1.11
SSH1-204ENST00000546697 NUTM2EB1AL46 878 aaPredicted RBP21.99■■□□□ 1.11
SSH1-204ENST00000546697 XPCQ01831 940 aaPredicted RBP21.99■■□□□ 1.11
SSH1-204ENST00000546697 NUTM2AQ8IVF1 878 aaPredicted RBP21.99■■□□□ 1.11
SSH1-204ENST00000546697 NUDT16Q96DE0 195 aaKnown RBP21.99■■□□□ 1.11
SSH1-204ENST00000546697 CDK19Q9BWU1 502 aa21.99■■□□□ 1.11
SSH1-204ENST00000546697 TONSLQ96HA7 1378 aa21.99■■□□□ 1.11
SSH1-204ENST00000546697 PLEKHG3A1L390 1219 aa21.98■■□□□ 1.11
SSH1-204ENST00000546697 AFF2P51816 1311 aa21.98■■□□□ 1.11
SSH1-204ENST00000546697 CCDC61Q9Y6R9 512 aa21.97■■□□□ 1.11
SSH1-204ENST00000546697 PMFBP1Q8TBY8 1022 aa21.95■■□□□ 1.1
SSH1-204ENST00000546697 ABCA3Q99758 1704 aa21.94■■□□□ 1.1
SSH1-204ENST00000546697 TIMELESSQ9UNS1 1208 aa21.93■■□□□ 1.1
SSH1-204ENST00000546697 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.92■■□□□ 1.1
SSH1-204ENST00000546697 CRYBG1Q9Y4K1 1723 aa21.92■■□□□ 1.1
SSH1-204ENST00000546697 SLIT2O94813 1529 aa21.92■■□□□ 1.1
SSH1-204ENST00000546697 BRD4O60885 1362 aaPredicted RBP21.92■■□□□ 1.1
SSH1-204ENST00000546697 C8orf37Q96NL8 207 aa21.92■■□□□ 1.1
SSH1-204ENST00000546697 BCL9LQ86UU0 1499 aa21.91■■□□□ 1.1
SSH1-204ENST00000546697 ADAMTS2O95450 1211 aa21.9■■□□□ 1.1
SSH1-204ENST00000546697 ATRNO75882 1429 aa21.89■■□□□ 1.1
SSH1-204ENST00000546697 NGLY1Q96IV0 654 aa21.89■■□□□ 1.09
SSH1-204ENST00000546697 NGDNQ8NEJ9 315 aaKnown RBP21.88■■□□□ 1.09
SSH1-204ENST00000546697 EVC2Q86UK5 1308 aa21.87■■□□□ 1.09
SSH1-204ENST00000546697 PPIP5K1Q6PFW1 1433 aa21.87■■□□□ 1.09
SSH1-204ENST00000546697 ACEP12821 1306 aa21.86■■□□□ 1.09
SSH1-204ENST00000546697 RXRBP28702 533 aa21.86■■□□□ 1.09
SSH1-204ENST00000546697 RBM6P78332 1123 aaKnown RBP21.86■■□□□ 1.09
SSH1-204ENST00000546697 NWD2Q9ULI1 1742 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms