RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 SMC4Q9NTJ3 1288 aa6.39□□□□□ -1.39
UBE4A-203ENST00000545354 MAGEC2Q9UBF1 373 aaPredicted RBP6.39□□□□□ -1.39
UBE4A-203ENST00000545354 KIF3AQ9Y496 699 aa6.39□□□□□ -1.39
UBE4A-203ENST00000545354 ZNF280DQ6N043 979 aa6.38□□□□□ -1.39
UBE4A-203ENST00000545354 ZNF513Q8N8E2 541 aaPredicted RBP6.38□□□□□ -1.39
UBE4A-203ENST00000545354 HELBQ8NG08 1087 aaPredicted RBP6.38□□□□□ -1.39
UBE4A-203ENST00000545354 NCAPGQ9BPX3 1015 aa6.38□□□□□ -1.39
UBE4A-203ENST00000545354 PPP4R2Q9NY27 417 aa6.38□□□□□ -1.39
UBE4A-203ENST00000545354 MCCD1P59942 119 aaPredicted RBP6.38□□□□□ -1.39
UBE4A-203ENST00000545354 CDC37Q16543 378 aaPredicted RBP6.38□□□□□ -1.39
UBE4A-203ENST00000545354 CDCA8Q53HL2 280 aa6.38□□□□□ -1.39
UBE4A-203ENST00000545354 HSP90B2PQ58FF3 399 aa6.38□□□□□ -1.39
UBE4A-203ENST00000545354 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.38□□□□□ -1.39
UBE4A-203ENST00000545354 DDX46Q7L014 1031 aaKnown RBP6.38□□□□□ -1.39
UBE4A-203ENST00000545354 APBB1IPQ7Z5R6 666 aaPredicted RBP6.38□□□□□ -1.39
UBE4A-203ENST00000545354 ABCF2Q9UG63 623 aa6.38□□□□□ -1.39
UBE4A-203ENST00000545354 ISY1Q9ULR0 285 aaKnown RBP6.38□□□□□ -1.39
UBE4A-203ENST00000545354 APBB1O00213 710 aa6.37□□□□□ -1.39
UBE4A-203ENST00000545354 RIOK3O14730 519 aaKnown RBP6.37□□□□□ -1.39
UBE4A-203ENST00000545354 CTAGE5O15320 804 aa6.37□□□□□ -1.39
UBE4A-203ENST00000545354 BRD1O95696 1058 aa6.37□□□□□ -1.39
UBE4A-203ENST00000545354 PEX19P40855 299 aa6.37□□□□□ -1.39
UBE4A-203ENST00000545354 UVSSAQ2YD98 709 aa6.37□□□□□ -1.39
UBE4A-203ENST00000545354 CCDC181Q5TID7 509 aa6.37□□□□□ -1.39
UBE4A-203ENST00000545354 FRAT1Q92837 279 aaPredicted RBP6.37□□□□□ -1.39
UBE4A-203ENST00000545354 COLQQ9Y215 455 aaPredicted RBP6.37□□□□□ -1.39
UBE4A-203ENST00000545354 TRIM6-TRIM34B2RNG4 842 aa6.37□□□□□ -1.39
UBE4A-203ENST00000545354 MPHOSPH10O00566 681 aaKnown RBP6.37□□□□□ -1.39
UBE4A-203ENST00000545354 DYNC1I1O14576 645 aa6.37□□□□□ -1.39
UBE4A-203ENST00000545354 ECM2O94769 699 aaPredicted RBP6.37□□□□□ -1.39
UBE4A-203ENST00000545354 IPO7O95373 1038 aaKnown RBP6.37□□□□□ -1.39
UBE4A-203ENST00000545354 TRDNQ13061 729 aa6.37□□□□□ -1.39
UBE4A-203ENST00000545354 CACTIN-AS1Q8N1I8 211 aa6.37□□□□□ -1.39
UBE4A-203ENST00000545354 RNF217Q8TC41 542 aa6.37□□□□□ -1.39
UBE4A-203ENST00000545354 TRIM34Q9BYJ4 488 aa6.37□□□□□ -1.39
UBE4A-203ENST00000545354 JADE2Q9NQC1 790 aa6.37□□□□□ -1.39
UBE4A-203ENST00000545354 GOLGA6CA6NDK9 693 aa6.36□□□□□ -1.39
UBE4A-203ENST00000545354 GOLGA6BA6NDN3 693 aa6.36□□□□□ -1.39
UBE4A-203ENST00000545354 DHX16O60231 1041 aaKnown RBP6.36□□□□□ -1.39
UBE4A-203ENST00000545354 GOLGA6DP0CG33 693 aa6.36□□□□□ -1.39
UBE4A-203ENST00000545354 SETSIPP0DME0 302 aa6.36□□□□□ -1.39
UBE4A-203ENST00000545354 HDGFL1Q5TGJ6 251 aa6.36□□□□□ -1.39
UBE4A-203ENST00000545354 CREBRFQ8IUR6 639 aa6.36□□□□□ -1.39
UBE4A-203ENST00000545354 NGEFQ8N5V2 710 aa6.36□□□□□ -1.39
UBE4A-203ENST00000545354 GOLGA6AQ9NYA3 693 aa6.36□□□□□ -1.39
UBE4A-203ENST00000545354 RBM27Q9P2N5 1060 aaKnown RBP6.36□□□□□ -1.39
UBE4A-203ENST00000545354 PPME1Q9Y570 386 aa6.36□□□□□ -1.39
UBE4A-203ENST00000545354 EXOC5O00471 708 aa6.35□□□□□ -1.39
UBE4A-203ENST00000545354 MARCH6O60337 910 aa6.35□□□□□ -1.39
UBE4A-203ENST00000545354 POTEJP0CG39 1038 aa6.35□□□□□ -1.39
UBE4A-203ENST00000545354 IRX5P78411 483 aaPredicted RBP6.35□□□□□ -1.39
UBE4A-203ENST00000545354 SPRYD3Q8NCJ5 442 aa6.35□□□□□ -1.39
UBE4A-203ENST00000545354 LSM14AQ8ND56 463 aaKnown RBP6.35□□□□□ -1.39
UBE4A-203ENST00000545354 CCDC97Q96F63 343 aaPredicted RBP6.35□□□□□ -1.39
UBE4A-203ENST00000545354 TIGD1Q96MW7 591 aa6.35□□□□□ -1.39
UBE4A-203ENST00000545354 DONSONQ9NYP3 566 aa6.35□□□□□ -1.39
UBE4A-203ENST00000545354 SYNPO2Q9UMS6 1093 aa6.35□□□□□ -1.39
UBE4A-203ENST00000545354 KIF16BQ96L93 1317 aa6.35□□□□□ -1.39
UBE4A-203ENST00000545354 SMARCA2P51531 1590 aa6.35□□□□□ -1.39
UBE4A-203ENST00000545354 IGF1RP08069 1367 aa6.35□□□□□ -1.39
UBE4A-203ENST00000545354 SEC24BO95487 1268 aa6.35□□□□□ -1.39
UBE4A-203ENST00000545354 SCP2P22307 547 aa6.35□□□□□ -1.39
UBE4A-203ENST00000545354 TNNT3P45378 269 aaPredicted RBP6.35□□□□□ -1.39
UBE4A-203ENST00000545354 RPAINQ86UA6 219 aa6.35□□□□□ -1.39
UBE4A-203ENST00000545354 MORC4Q8TE76 937 aa6.35□□□□□ -1.39
UBE4A-203ENST00000545354 SPATA32Q96LK8 384 aa6.35□□□□□ -1.39
UBE4A-203ENST00000545354 CCDC85AQ96PX6 553 aaPredicted RBP6.35□□□□□ -1.39
UBE4A-203ENST00000545354 LARP6Q9BRS8 491 aaKnown RBP6.35□□□□□ -1.39
UBE4A-203ENST00000545354 MED4Q9NPJ6 270 aa6.35□□□□□ -1.39
UBE4A-203ENST00000545354 CALCOCO1Q9P1Z2 691 aa6.35□□□□□ -1.39
UBE4A-203ENST00000545354 NINLQ9Y2I6 1382 aa6.34□□□□□ -1.39
UBE4A-203ENST00000545354 PPP1R12AO14974 1030 aaPredicted RBP6.34□□□□□ -1.39
UBE4A-203ENST00000545354 TDO2P48775 406 aa6.34□□□□□ -1.39
UBE4A-203ENST00000545354 NEUROD2Q15784 382 aa6.34□□□□□ -1.39
UBE4A-203ENST00000545354 ZCRB1Q8TBF4 217 aaKnown RBP6.34□□□□□ -1.39
UBE4A-203ENST00000545354 GZF1Q9H116 711 aaPredicted RBP6.34□□□□□ -1.39
UBE4A-203ENST00000545354 SSFA2P28290 1259 aa6.34□□□□□ -1.4
UBE4A-203ENST00000545354 KIAA2012Q0VF49 1180 aa6.34□□□□□ -1.4
UBE4A-203ENST00000545354 HSP90AB2PQ58FF8 381 aa6.34□□□□□ -1.4
UBE4A-203ENST00000545354 GJC2Q5T442 439 aaPredicted RBP6.34□□□□□ -1.4
UBE4A-203ENST00000545354 NUCKS1Q9H1E3 243 aaKnown RBP6.34□□□□□ -1.4
UBE4A-203ENST00000545354 ATAD2BQ9ULI0 1458 aa6.33□□□□□ -1.4
UBE4A-203ENST00000545354 COQ9O75208 318 aa6.33□□□□□ -1.4
UBE4A-203ENST00000545354 OTUD5Q96G74 571 aa6.33□□□□□ -1.4
UBE4A-203ENST00000545354 SLC26A8Q96RN1 970 aa6.33□□□□□ -1.4
UBE4A-203ENST00000545354 TMX4Q9H1E5 349 aaPredicted RBP6.33□□□□□ -1.4
UBE4A-203ENST00000545354 OCEL1Q9H607 264 aa6.33□□□□□ -1.4
UBE4A-203ENST00000545354 SMC3Q9UQE7 1217 aa6.33□□□□□ -1.4
UBE4A-203ENST00000545354 KLHL33A6NCF5 533 aa6.32□□□□□ -1.4
UBE4A-203ENST00000545354 ARID3CA6NKF2 412 aa6.32□□□□□ -1.4
UBE4A-203ENST00000545354 RGL2O15211 777 aa6.32□□□□□ -1.4
UBE4A-203ENST00000545354 IPO8O15397 1037 aaKnown RBP6.32□□□□□ -1.4
UBE4A-203ENST00000545354 CD151P48509 253 aa6.32□□□□□ -1.4
UBE4A-203ENST00000545354 PSMC1P62191 440 aaKnown RBP6.32□□□□□ -1.4
UBE4A-203ENST00000545354 GOLGA2Q08379 1002 aa6.32□□□□□ -1.4
UBE4A-203ENST00000545354 MKRN3Q13064 507 aaKnown RBP6.32□□□□□ -1.4
UBE4A-203ENST00000545354 ERCC4Q92889 916 aaPredicted RBP6.32□□□□□ -1.4
UBE4A-203ENST00000545354 SYNRGQ9UMZ2 1314 aa6.32□□□□□ -1.4
UBE4A-203ENST00000545354 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.32□□□□□ -1.4
UBE4A-203ENST00000545354 SMARCA5O60264 1052 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms