RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 HMOX1P09601 288 aa4.92□□□□□ -1.62
BRCA2-206ENST00000544455 CDK19Q9BWU1 502 aa4.92□□□□□ -1.62
BRCA2-206ENST00000544455 MLH3Q9UHC1 1453 aa4.91□□□□□ -1.62
BRCA2-206ENST00000544455 ZNF521Q96K83 1311 aa4.91□□□□□ -1.62
BRCA2-206ENST00000544455 TET3O43151 1660 aa4.91□□□□□ -1.62
BRCA2-206ENST00000544455 MAP3K4Q9Y6R4 1608 aa4.91□□□□□ -1.62
BRCA2-206ENST00000544455 ABCC3O15438 1527 aa4.91□□□□□ -1.62
BRCA2-206ENST00000544455 MYOM2P54296 1465 aa4.91□□□□□ -1.62
BRCA2-206ENST00000544455 ANP32AP39687 249 aaKnown RBP4.91□□□□□ -1.62
BRCA2-206ENST00000544455 NOP58Q9Y2X3 529 aaKnown RBP4.91□□□□□ -1.62
BRCA2-206ENST00000544455 EMILIN1Q9Y6C2 1016 aa4.91□□□□□ -1.62
BRCA2-206ENST00000544455 ADGRB3O60242 1522 aa4.91□□□□□ -1.62
BRCA2-206ENST00000544455 ZMYM4Q5VZL5 1548 aa4.91□□□□□ -1.62
BRCA2-206ENST00000544455 ELL2O00472 640 aaPredicted RBP4.91□□□□□ -1.62
BRCA2-206ENST00000544455 THUMPD2Q9BTF0 503 aaKnown RBP4.91□□□□□ -1.62
BRCA2-206ENST00000544455 DEPDC5O75140 1603 aa4.91□□□□□ -1.62
BRCA2-206ENST00000544455 STAC3Q96MF2 364 aa4.91□□□□□ -1.62
BRCA2-206ENST00000544455 RBM33Q96EV2 1170 aaKnown RBP4.91□□□□□ -1.62
BRCA2-206ENST00000544455 FYB1O15117 783 aa4.9□□□□□ -1.62
BRCA2-206ENST00000544455 ESF1Q9H501 851 aaKnown RBP4.9□□□□□ -1.62
BRCA2-206ENST00000544455 CEP152O94986 1710 aa4.9□□□□□ -1.62
BRCA2-206ENST00000544455 SPHKAPQ2M3C7 1700 aa4.9□□□□□ -1.62
BRCA2-206ENST00000544455 TULP4Q9NRJ4 1543 aa4.9□□□□□ -1.62
BRCA2-206ENST00000544455 RLBP1P12271 317 aa4.9□□□□□ -1.62
BRCA2-206ENST00000544455 RUNDC1Q96C34 613 aa4.9□□□□□ -1.62
BRCA2-206ENST00000544455 RRS1Q15050 365 aaKnown RBP4.9□□□□□ -1.63
BRCA2-206ENST00000544455 POLR1AO95602 1720 aaPredicted RBP4.9□□□□□ -1.63
BRCA2-206ENST00000544455 HECW2Q9P2P5 1572 aa4.9□□□□□ -1.63
BRCA2-206ENST00000544455 SYNMO15061 1565 aa4.9□□□□□ -1.63
BRCA2-206ENST00000544455 E9PSI1 815 aa4.89□□□□□ -1.63
BRCA2-206ENST00000544455 EXOSC9Q06265 439 aaKnown RBP4.89□□□□□ -1.63
BRCA2-206ENST00000544455 CFAP53Q96M91 514 aa4.89□□□□□ -1.63
BRCA2-206ENST00000544455 ZBTB47Q9UFB7 747 aaPredicted RBP4.89□□□□□ -1.63
BRCA2-206ENST00000544455 NME9Q86XW9 330 aa4.89□□□□□ -1.63
BRCA2-206ENST00000544455 DIP2CQ9Y2E4 1556 aa4.89□□□□□ -1.63
BRCA2-206ENST00000544455 IPO9Q96P70 1041 aaKnown RBP4.89□□□□□ -1.63
BRCA2-206ENST00000544455 NRXN1Q9ULB1 1477 aa4.89□□□□□ -1.63
BRCA2-206ENST00000544455 BACH2Q9BYV9 841 aa4.89□□□□□ -1.63
BRCA2-206ENST00000544455 IQGAP1P46940 1657 aa4.89□□□□□ -1.63
BRCA2-206ENST00000544455 MYOM1P52179 1685 aa4.89□□□□□ -1.63
BRCA2-206ENST00000544455 SLC26A8Q96RN1 970 aa4.89□□□□□ -1.63
BRCA2-206ENST00000544455 LAMC1P11047 1609 aa4.89□□□□□ -1.63
BRCA2-206ENST00000544455 ADGRB1O14514 1584 aa4.89□□□□□ -1.63
BRCA2-206ENST00000544455 RPGRIP1LQ68CZ1 1315 aa4.88□□□□□ -1.63
BRCA2-206ENST00000544455 TRMT2AQ8IZ69 625 aaKnown RBP4.88□□□□□ -1.63
BRCA2-206ENST00000544455 LMTK2Q8IWU2 1503 aa4.88□□□□□ -1.63
BRCA2-206ENST00000544455 ANKRD36BQ8N2N9 1353 aa4.88□□□□□ -1.63
BRCA2-206ENST00000544455 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.88□□□□□ -1.63
BRCA2-206ENST00000544455 METP08581 1390 aa4.88□□□□□ -1.63
BRCA2-206ENST00000544455 KDM2BQ8NHM5 1336 aa4.88□□□□□ -1.63
BRCA2-206ENST00000544455 RARSP54136 660 aaKnown RBP4.88□□□□□ -1.63
BRCA2-206ENST00000544455 DCTN1Q14203 1278 aa4.88□□□□□ -1.63
BRCA2-206ENST00000544455 RIPK4P57078 832 aa4.88□□□□□ -1.63
BRCA2-206ENST00000544455 HDGFL2Q7Z4V5 671 aaPredicted RBP4.88□□□□□ -1.63
BRCA2-206ENST00000544455 YTHDC2Q9H6S0 1430 aaKnown RBP4.88□□□□□ -1.63
BRCA2-206ENST00000544455 NUTM2GQ5VZR2 741 aa4.88□□□□□ -1.63
BRCA2-206ENST00000544455 MAPK8IP3Q9UPT6 1336 aa4.88□□□□□ -1.63
BRCA2-206ENST00000544455 SLC52A1Q9NWF4 448 aa4.87□□□□□ -1.63
BRCA2-206ENST00000544455 DIAPH1O60610 1272 aaKnown RBP4.87□□□□□ -1.63
BRCA2-206ENST00000544455 NKTRP30414 1462 aaKnown RBP4.87□□□□□ -1.63
BRCA2-206ENST00000544455 PRKAR2BP31323 418 aa4.87□□□□□ -1.63
BRCA2-206ENST00000544455 POLR3AO14802 1390 aaPredicted RBP4.87□□□□□ -1.63
BRCA2-206ENST00000544455 TERF2IPQ9NYB0 399 aa4.87□□□□□ -1.63
BRCA2-206ENST00000544455 NEO1Q92859 1461 aa4.87□□□□□ -1.63
BRCA2-206ENST00000544455 FAM83GA6ND36 823 aa4.87□□□□□ -1.63
BRCA2-206ENST00000544455 PLEKHF1Q96S99 279 aa4.87□□□□□ -1.63
BRCA2-206ENST00000544455 SIGLEC1Q9BZZ2 1709 aa4.87□□□□□ -1.63
BRCA2-206ENST00000544455 SMC4Q9NTJ3 1288 aa4.87□□□□□ -1.63
BRCA2-206ENST00000544455 TRIM35Q9UPQ4 493 aa4.87□□□□□ -1.63
BRCA2-206ENST00000544455 PMFBP1Q8TBY8 1022 aa4.87□□□□□ -1.63
BRCA2-206ENST00000544455 NEXMIFQ5QGS0 1516 aa4.87□□□□□ -1.63
BRCA2-206ENST00000544455 GLI2P10070 1586 aa4.86□□□□□ -1.63
BRCA2-206ENST00000544455 C8orf34Q49A92 452 aa4.86□□□□□ -1.63
BRCA2-206ENST00000544455 PHACTR3Q96KR7 559 aa4.86□□□□□ -1.63
BRCA2-206ENST00000544455 PCDHB15Q9Y5E8 787 aa4.86□□□□□ -1.63
BRCA2-206ENST00000544455 INSRP06213 1382 aa4.86□□□□□ -1.63
BRCA2-206ENST00000544455 ZBTB7CA1YPR0 619 aa4.86□□□□□ -1.63
BRCA2-206ENST00000544455 SEC24BO95487 1268 aa4.86□□□□□ -1.63
BRCA2-206ENST00000544455 POLKQ9UBT6 870 aa4.86□□□□□ -1.63
BRCA2-206ENST00000544455 CAMSAP1Q5T5Y3 1602 aa4.86□□□□□ -1.63
BRCA2-206ENST00000544455 CENPQQ7L2Z9 268 aaPredicted RBP4.86□□□□□ -1.63
BRCA2-206ENST00000544455 NPC1L1Q9UHC9 1359 aa4.86□□□□□ -1.63
BRCA2-206ENST00000544455 PIK3C2BO00750 1634 aa4.86□□□□□ -1.63
BRCA2-206ENST00000544455 ITPRIPQ8IWB1 547 aa4.86□□□□□ -1.63
BRCA2-206ENST00000544455 SPRYD3Q8NCJ5 442 aa4.86□□□□□ -1.63
BRCA2-206ENST00000544455 TRHP20396 242 aaPredicted RBP4.86□□□□□ -1.63
BRCA2-206ENST00000544455 RIMS2Q9UQ26 1411 aa4.86□□□□□ -1.63
BRCA2-206ENST00000544455 KRT24Q2M2I5 525 aa4.85□□□□□ -1.63
BRCA2-206ENST00000544455 TSPYL6Q8N831 410 aa4.85□□□□□ -1.63
BRCA2-206ENST00000544455 KDM5AP29375 1690 aaKnown RBP4.85□□□□□ -1.63
BRCA2-206ENST00000544455 TMPOP42166 694 aaKnown RBP4.85□□□□□ -1.63
BRCA2-206ENST00000544455 NUDT16Q96DE0 195 aaKnown RBP4.85□□□□□ -1.63
BRCA2-206ENST00000544455 C1orf115Q9H7X2 142 aa4.85□□□□□ -1.63
BRCA2-206ENST00000544455 ZMYM3Q14202 1370 aa4.85□□□□□ -1.63
BRCA2-206ENST00000544455 PTPRMP28827 1452 aa4.85□□□□□ -1.63
BRCA2-206ENST00000544455 LTKP29376 864 aa4.85□□□□□ -1.63
BRCA2-206ENST00000544455 AEBP1Q8IUX7 1158 aa4.85□□□□□ -1.63
BRCA2-206ENST00000544455 NOB1Q9ULX3 412 aaKnown RBP4.85□□□□□ -1.63
BRCA2-206ENST00000544455 FTSJ3Q8IY81 847 aaKnown RBP4.85□□□□□ -1.63
BRCA2-206ENST00000544455 DEKP35659 375 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms