RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 CDC42BPGQ6DT37 1551 aa20.26■□□□□ 0.83
VAMP1-208ENST00000544432 PLEKHH1Q9ULM0 1364 aa20.26■□□□□ 0.83
VAMP1-208ENST00000544432 LRRC59Q96AG4 307 aaKnown RBP20.26■□□□□ 0.83
VAMP1-208ENST00000544432 NHSL1Q5SYE7 1610 aa20.25■□□□□ 0.83
VAMP1-208ENST00000544432 ORAI2Q96SN7 254 aa20.25■□□□□ 0.83
VAMP1-208ENST00000544432 SOCS7O14512 581 aa20.24■□□□□ 0.83
VAMP1-208ENST00000544432 DLC1Q96QB1 1528 aa20.23■□□□□ 0.83
VAMP1-208ENST00000544432 ADGRB1O14514 1584 aa20.23■□□□□ 0.83
VAMP1-208ENST00000544432 RGS17Q9UGC6 210 aaPredicted RBP20.23■□□□□ 0.83
VAMP1-208ENST00000544432 PRAM1Q96QH2 718 aa20.21■□□□□ 0.83
VAMP1-208ENST00000544432 SHPRHQ149N8 1683 aa20.21■□□□□ 0.83
VAMP1-208ENST00000544432 SOS2Q07890 1332 aaPredicted RBP20.21■□□□□ 0.83
VAMP1-208ENST00000544432 DDX17Q92841 729 aaKnown RBP20.2■□□□□ 0.82
VAMP1-208ENST00000544432 ESCO1Q5FWF5 840 aa20.19■□□□□ 0.82
VAMP1-208ENST00000544432 POGKQ9P215 609 aa20.19■□□□□ 0.82
VAMP1-208ENST00000544432 TRIM26Q12899 539 aaPredicted RBP20.18■□□□□ 0.82
VAMP1-208ENST00000544432 TRAK1Q9UPV9 953 aa20.17■□□□□ 0.82
VAMP1-208ENST00000544432 NPHP3Q7Z494 1330 aa20.17■□□□□ 0.82
VAMP1-208ENST00000544432 PNPLA6Q8IY17 1366 aa20.15■□□□□ 0.82
VAMP1-208ENST00000544432 LRP6O75581 1613 aa20.15■□□□□ 0.82
VAMP1-208ENST00000544432 FMN2Q9NZ56 1722 aa20.13■□□□□ 0.81
VAMP1-208ENST00000544432 NUTM2FA1L443 756 aa20.13■□□□□ 0.81
VAMP1-208ENST00000544432 SAFB2Q14151 953 aaKnown RBP eCLIP20.13■□□□□ 0.81
VAMP1-208ENST00000544432 FOXO3O43524 673 aa20.12■□□□□ 0.81
VAMP1-208ENST00000544432 MEX3CQ5U5Q3 659 aaKnown RBP20.12■□□□□ 0.81
VAMP1-208ENST00000544432 POTEAQ6S8J7 498 aa20.12■□□□□ 0.81
VAMP1-208ENST00000544432 NUTM2BA6NNL0 878 aaPredicted RBP20.11■□□□□ 0.81
VAMP1-208ENST00000544432 NUTM2EB1AL46 878 aaPredicted RBP20.11■□□□□ 0.81
VAMP1-208ENST00000544432 NUTM2AQ8IVF1 878 aaPredicted RBP20.11■□□□□ 0.81
VAMP1-208ENST00000544432 L3MBTL2Q969R5 705 aa20.11■□□□□ 0.81
VAMP1-208ENST00000544432 KIAA1210Q9ULL0 1709 aa20.1■□□□□ 0.81
VAMP1-208ENST00000544432 ADGRB2O60241 1585 aa20.1■□□□□ 0.81
VAMP1-208ENST00000544432 SIN3AQ96ST3 1273 aa20.1■□□□□ 0.81
VAMP1-208ENST00000544432 PXDNQ92626 1479 aa20.1■□□□□ 0.81
VAMP1-208ENST00000544432 ANKARQ7Z5J8 1434 aa20.1■□□□□ 0.81
VAMP1-208ENST00000544432 ZNF772Q68DY9 489 aaPredicted RBP20.09■□□□□ 0.81
VAMP1-208ENST00000544432 PHF8Q9UPP1 1060 aa20.08■□□□□ 0.81
VAMP1-208ENST00000544432 EIF3AQ14152 1382 aaKnown RBP20.08■□□□□ 0.8
VAMP1-208ENST00000544432 NBPF1Q3BBV0 1214 aa20.07■□□□□ 0.8
VAMP1-208ENST00000544432 KIF1AQ12756 1690 aa20.07■□□□□ 0.8
VAMP1-208ENST00000544432 MINK1Q8N4C8 1332 aaPredicted RBP20.06■□□□□ 0.8
VAMP1-208ENST00000544432 WASLO00401 505 aaPredicted RBP20.06■□□□□ 0.8
VAMP1-208ENST00000544432 NEUROD1Q13562 356 aa20.05■□□□□ 0.8
VAMP1-208ENST00000544432 KRT28Q7Z3Y7 464 aa20.05■□□□□ 0.8
VAMP1-208ENST00000544432 HIRIP3Q9BW71 556 aaPredicted RBP20.05■□□□□ 0.8
VAMP1-208ENST00000544432 XPCQ01831 940 aaPredicted RBP20.04■□□□□ 0.8
VAMP1-208ENST00000544432 PSME1Q06323 249 aa20.04■□□□□ 0.8
VAMP1-208ENST00000544432 SPATA31A3Q5VYP0 1347 aa20.03■□□□□ 0.8
VAMP1-208ENST00000544432 COL22A1Q8NFW1 1626 aaPredicted RBP20.02■□□□□ 0.8
VAMP1-208ENST00000544432 ARHGEF28Q8N1W1 1705 aaKnown RBP20.02■□□□□ 0.8
VAMP1-208ENST00000544432 AFF2P51816 1311 aa20.02■□□□□ 0.79
VAMP1-208ENST00000544432 TULP4Q9NRJ4 1543 aa20.01■□□□□ 0.79
VAMP1-208ENST00000544432 PRR36Q9H6K5 1346 aa20.01■□□□□ 0.79
VAMP1-208ENST00000544432 SBNO1A3KN83 1393 aa20■□□□□ 0.79
VAMP1-208ENST00000544432 USP32Q8NFA0 1604 aa20■□□□□ 0.79
VAMP1-208ENST00000544432 RGPD8O14715 1765 aaPredicted RBP20■□□□□ 0.79
VAMP1-208ENST00000544432 C8orf37Q96NL8 207 aa19.99■□□□□ 0.79
VAMP1-208ENST00000544432 ADAMTS2O95450 1211 aa19.98■□□□□ 0.79
VAMP1-208ENST00000544432 PMFBP1Q8TBY8 1022 aa19.98■□□□□ 0.79
VAMP1-208ENST00000544432 NGLY1Q96IV0 654 aa19.98■□□□□ 0.79
VAMP1-208ENST00000544432 CDK19Q9BWU1 502 aa19.97■□□□□ 0.79
VAMP1-208ENST00000544432 TNS3Q68CZ2 1445 aa19.96■□□□□ 0.79
VAMP1-208ENST00000544432 FNBP4Q8N3X1 1017 aaPredicted RBP19.96■□□□□ 0.79
VAMP1-208ENST00000544432 NUDT16Q96DE0 195 aaKnown RBP19.96■□□□□ 0.79
VAMP1-208ENST00000544432 CENPJQ9HC77 1338 aaPredicted RBP19.96■□□□□ 0.79
VAMP1-208ENST00000544432 RXRBP28702 533 aa19.95■□□□□ 0.78
VAMP1-208ENST00000544432 ARHGEF10O15013 1369 aa19.94■□□□□ 0.78
VAMP1-208ENST00000544432 GPRASP1Q5JY77 1395 aa19.94■□□□□ 0.78
VAMP1-208ENST00000544432 ATP7BP35670 1465 aa19.93■□□□□ 0.78
VAMP1-208ENST00000544432 QTRT2Q9H974 415 aaKnown RBP19.93■□□□□ 0.78
VAMP1-208ENST00000544432 CCDC61Q9Y6R9 512 aa19.93■□□□□ 0.78
VAMP1-208ENST00000544432 TRPM1Q7Z4N2 1603 aa19.92■□□□□ 0.78
VAMP1-208ENST00000544432 NBPF8Q3BBV2 869 aa19.92■□□□□ 0.78
VAMP1-208ENST00000544432 NGDNQ8NEJ9 315 aaKnown RBP19.92■□□□□ 0.78
VAMP1-208ENST00000544432 ROCK2O75116 1388 aaKnown RBP19.92■□□□□ 0.78
VAMP1-208ENST00000544432 PLEKHG3A1L390 1219 aa19.91■□□□□ 0.78
VAMP1-208ENST00000544432 CDK12Q9NYV4 1490 aaPredicted RBP19.91■□□□□ 0.78
VAMP1-208ENST00000544432 RBM6P78332 1123 aaKnown RBP19.9■□□□□ 0.78
VAMP1-208ENST00000544432 USP21Q9UK80 565 aa19.9■□□□□ 0.78
VAMP1-208ENST00000544432 TONSLQ96HA7 1378 aa19.9■□□□□ 0.78
VAMP1-208ENST00000544432 POLR3AO14802 1390 aaPredicted RBP19.88■□□□□ 0.77
VAMP1-208ENST00000544432 TRPC5Q9UL62 973 aaPredicted RBP19.88■□□□□ 0.77
VAMP1-208ENST00000544432 LMOD2Q6P5Q4 547 aa19.87■□□□□ 0.77
VAMP1-208ENST00000544432 ITSN1Q15811 1721 aa19.87■□□□□ 0.77
VAMP1-208ENST00000544432 TRPM3Q9HCF6 1732 aaPredicted RBP19.86■□□□□ 0.77
VAMP1-208ENST00000544432 SRPK2P78362 688 aaKnown RBP19.86■□□□□ 0.77
VAMP1-208ENST00000544432 BCL9LQ86UU0 1499 aa19.86■□□□□ 0.77
VAMP1-208ENST00000544432 ACEP12821 1306 aa19.85■□□□□ 0.77
VAMP1-208ENST00000544432 CABLES1Q8TDN4 633 aa19.85■□□□□ 0.77
VAMP1-208ENST00000544432 MARF1Q9Y4F3 1742 aaKnown RBP19.85■□□□□ 0.77
VAMP1-208ENST00000544432 ATRNO75882 1429 aa19.85■□□□□ 0.77
VAMP1-208ENST00000544432 HAP1P54257 671 aaPredicted RBP19.84■□□□□ 0.77
VAMP1-208ENST00000544432 EVC2Q86UK5 1308 aa19.83■□□□□ 0.77
VAMP1-208ENST00000544432 SLIT2O94813 1529 aa19.83■□□□□ 0.77
VAMP1-208ENST00000544432 CABP2Q9NPB3 220 aa19.83■□□□□ 0.77
VAMP1-208ENST00000544432 TOPAZ1Q8N9V7 1692 aa19.83■□□□□ 0.76
VAMP1-208ENST00000544432 QRICH2Q9H0J4 1663 aa19.83■□□□□ 0.76
VAMP1-208ENST00000544432 ALS2Q96Q42 1657 aa19.82■□□□□ 0.76
VAMP1-208ENST00000544432 UNC5CLQ8IV45 518 aa19.82■□□□□ 0.76
VAMP1-208ENST00000544432 RALGAPBQ86X10 1494 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms