RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 DLC1Q96QB1 1528 aa33.79■■■■□ 3
CHFR-222ENST00000544093 ADGRB1O14514 1584 aa33.79■■■■□ 3
CHFR-222ENST00000544093 SHPRHQ149N8 1683 aa33.78■■■■□ 3
CHFR-222ENST00000544093 ILDR2Q71H61 639 aa33.77■■■■□ 3
CHFR-222ENST00000544093 SPATA31A6Q5VVP1 1343 aa33.77■■■■□ 3
CHFR-222ENST00000544093 PLEKHH1Q9ULM0 1364 aa33.75■■■□□ 2.99
CHFR-222ENST00000544093 TRIM26Q12899 539 aaPredicted RBP33.75■■■□□ 2.99
CHFR-222ENST00000544093 LRRC59Q96AG4 307 aaKnown RBP33.72■■■□□ 2.99
CHFR-222ENST00000544093 FMN2Q9NZ56 1722 aa33.7■■■□□ 2.98
CHFR-222ENST00000544093 PRAM1Q96QH2 718 aa33.69■■■□□ 2.98
CHFR-222ENST00000544093 ORAI2Q96SN7 254 aa33.69■■■□□ 2.98
CHFR-222ENST00000544093 KIAA1210Q9ULL0 1709 aa33.69■■■□□ 2.98
CHFR-222ENST00000544093 POGKQ9P215 609 aa33.68■■■□□ 2.98
CHFR-222ENST00000544093 ESCO1Q5FWF5 840 aa33.65■■■□□ 2.98
CHFR-222ENST00000544093 SOS2Q07890 1332 aaPredicted RBP33.63■■■□□ 2.97
CHFR-222ENST00000544093 NPHP3Q7Z494 1330 aa33.63■■■□□ 2.97
CHFR-222ENST00000544093 TRAK1Q9UPV9 953 aa33.63■■■□□ 2.97
CHFR-222ENST00000544093 ADGRB2O60241 1585 aa33.62■■■□□ 2.97
CHFR-222ENST00000544093 DDX17Q92841 729 aaKnown RBP33.61■■■□□ 2.97
CHFR-222ENST00000544093 KIF1AQ12756 1690 aa33.61■■■□□ 2.97
CHFR-222ENST00000544093 SOCS7O14512 581 aa33.58■■■□□ 2.97
CHFR-222ENST00000544093 SAFB2Q14151 953 aaKnown RBP eCLIP33.58■■■□□ 2.97
CHFR-222ENST00000544093 LRP6O75581 1613 aa33.57■■■□□ 2.97
CHFR-222ENST00000544093 ARHGEF28Q8N1W1 1705 aaKnown RBP33.56■■■□□ 2.96
CHFR-222ENST00000544093 NUTM2FA1L443 756 aa33.56■■■□□ 2.96
CHFR-222ENST00000544093 MEX3CQ5U5Q3 659 aaKnown RBP33.56■■■□□ 2.96
CHFR-222ENST00000544093 RGS17Q9UGC6 210 aaPredicted RBP33.56■■■□□ 2.96
CHFR-222ENST00000544093 PNPLA6Q8IY17 1366 aa33.56■■■□□ 2.96
CHFR-222ENST00000544093 EIF3AQ14152 1382 aaKnown RBP33.55■■■□□ 2.96
CHFR-222ENST00000544093 L3MBTL2Q969R5 705 aa33.53■■■□□ 2.96
CHFR-222ENST00000544093 SIN3AQ96ST3 1273 aa33.53■■■□□ 2.96
CHFR-222ENST00000544093 ANKARQ7Z5J8 1434 aa33.53■■■□□ 2.96
CHFR-222ENST00000544093 PXDNQ92626 1479 aa33.51■■■□□ 2.96
CHFR-222ENST00000544093 FOXO3O43524 673 aa33.51■■■□□ 2.95
CHFR-222ENST00000544093 RGPD8O14715 1765 aaPredicted RBP33.5■■■□□ 2.95
CHFR-222ENST00000544093 NEUROD1Q13562 356 aa33.49■■■□□ 2.95
CHFR-222ENST00000544093 NUTM2BA6NNL0 878 aaPredicted RBP33.48■■■□□ 2.95
CHFR-222ENST00000544093 NUTM2EB1AL46 878 aaPredicted RBP33.48■■■□□ 2.95
CHFR-222ENST00000544093 NUTM2AQ8IVF1 878 aaPredicted RBP33.48■■■□□ 2.95
CHFR-222ENST00000544093 MINK1Q8N4C8 1332 aaPredicted RBP33.47■■■□□ 2.95
CHFR-222ENST00000544093 COL22A1Q8NFW1 1626 aaPredicted RBP33.46■■■□□ 2.95
CHFR-222ENST00000544093 PHF8Q9UPP1 1060 aa33.46■■■□□ 2.95
CHFR-222ENST00000544093 ZNF772Q68DY9 489 aaPredicted RBP33.45■■■□□ 2.95
CHFR-222ENST00000544093 HIRIP3Q9BW71 556 aaPredicted RBP33.44■■■□□ 2.94
CHFR-222ENST00000544093 TULP4Q9NRJ4 1543 aa33.43■■■□□ 2.94
CHFR-222ENST00000544093 USP32Q8NFA0 1604 aa33.43■■■□□ 2.94
CHFR-222ENST00000544093 WASLO00401 505 aaPredicted RBP33.43■■■□□ 2.94
CHFR-222ENST00000544093 NBPF1Q3BBV0 1214 aa33.42■■■□□ 2.94
CHFR-222ENST00000544093 PSME1Q06323 249 aa33.4■■■□□ 2.94
CHFR-222ENST00000544093 POTEAQ6S8J7 498 aa33.4■■■□□ 2.94
CHFR-222ENST00000544093 TRPM1Q7Z4N2 1603 aa33.39■■■□□ 2.93
CHFR-222ENST00000544093 XPCQ01831 940 aaPredicted RBP33.38■■■□□ 2.93
CHFR-222ENST00000544093 KRT28Q7Z3Y7 464 aa33.37■■■□□ 2.93
CHFR-222ENST00000544093 ITSN1Q15811 1721 aa33.36■■■□□ 2.93
CHFR-222ENST00000544093 SPATA31A3Q5VYP0 1347 aa33.34■■■□□ 2.93
CHFR-222ENST00000544093 SBNO1A3KN83 1393 aa33.33■■■□□ 2.93
CHFR-222ENST00000544093 TONSLQ96HA7 1378 aa33.32■■■□□ 2.92
CHFR-222ENST00000544093 AFF2P51816 1311 aa33.31■■■□□ 2.92
CHFR-222ENST00000544093 CENPJQ9HC77 1338 aaPredicted RBP33.31■■■□□ 2.92
CHFR-222ENST00000544093 TNS3Q68CZ2 1445 aa33.31■■■□□ 2.92
CHFR-222ENST00000544093 C8orf37Q96NL8 207 aa33.31■■■□□ 2.92
CHFR-222ENST00000544093 PRR36Q9H6K5 1346 aa33.3■■■□□ 2.92
CHFR-222ENST00000544093 ROCK2O75116 1388 aaKnown RBP33.3■■■□□ 2.92
CHFR-222ENST00000544093 ADAMTS2O95450 1211 aa33.29■■■□□ 2.92
CHFR-222ENST00000544093 PMFBP1Q8TBY8 1022 aa33.29■■■□□ 2.92
CHFR-222ENST00000544093 ATP7BP35670 1465 aa33.29■■■□□ 2.92
CHFR-222ENST00000544093 GPRASP1Q5JY77 1395 aa33.28■■■□□ 2.92
CHFR-222ENST00000544093 ARHGEF10O15013 1369 aa33.27■■■□□ 2.92
CHFR-222ENST00000544093 NGLY1Q96IV0 654 aa33.27■■■□□ 2.92
CHFR-222ENST00000544093 CDK19Q9BWU1 502 aa33.27■■■□□ 2.92
CHFR-222ENST00000544093 QRICH2Q9H0J4 1663 aa33.26■■■□□ 2.92
CHFR-222ENST00000544093 MARF1Q9Y4F3 1742 aaKnown RBP33.26■■■□□ 2.92
CHFR-222ENST00000544093 NUDT16Q96DE0 195 aaKnown RBP33.26■■■□□ 2.91
CHFR-222ENST00000544093 NGDNQ8NEJ9 315 aaKnown RBP33.22■■■□□ 2.91
CHFR-222ENST00000544093 TOPAZ1Q8N9V7 1692 aa33.21■■■□□ 2.91
CHFR-222ENST00000544093 CCDC61Q9Y6R9 512 aa33.21■■■□□ 2.91
CHFR-222ENST00000544093 TRPM3Q9HCF6 1732 aaPredicted RBP33.21■■■□□ 2.91
CHFR-222ENST00000544093 RXRBP28702 533 aa33.19■■■□□ 2.9
CHFR-222ENST00000544093 FNBP4Q8N3X1 1017 aaPredicted RBP33.18■■■□□ 2.9
CHFR-222ENST00000544093 NBPF8Q3BBV2 869 aa33.17■■■□□ 2.9
CHFR-222ENST00000544093 SRPK2P78362 688 aaKnown RBP33.16■■■□□ 2.9
CHFR-222ENST00000544093 CDK12Q9NYV4 1490 aaPredicted RBP33.16■■■□□ 2.9
CHFR-222ENST00000544093 LMOD2Q6P5Q4 547 aa33.15■■■□□ 2.9
CHFR-222ENST00000544093 ALS2Q96Q42 1657 aa33.15■■■□□ 2.9
CHFR-222ENST00000544093 RALGAPBQ86X10 1494 aa33.14■■■□□ 2.9
CHFR-222ENST00000544093 HAP1P54257 671 aaPredicted RBP33.14■■■□□ 2.9
CHFR-222ENST00000544093 QTRT2Q9H974 415 aaKnown RBP33.14■■■□□ 2.9
CHFR-222ENST00000544093 USP21Q9UK80 565 aa33.14■■■□□ 2.9
CHFR-222ENST00000544093 POLR3AO14802 1390 aaPredicted RBP33.13■■■□□ 2.89
CHFR-222ENST00000544093 PLEKHG3A1L390 1219 aa33.13■■■□□ 2.89
CHFR-222ENST00000544093 ABCA3Q99758 1704 aa33.11■■■□□ 2.89
CHFR-222ENST00000544093 EVC2Q86UK5 1308 aa33.11■■■□□ 2.89
CHFR-222ENST00000544093 RBM6P78332 1123 aaKnown RBP33.11■■■□□ 2.89
CHFR-222ENST00000544093 TRPC5Q9UL62 973 aaPredicted RBP33.1■■■□□ 2.89
CHFR-222ENST00000544093 CLSPNQ9HAW4 1339 aa33.09■■■□□ 2.89
CHFR-222ENST00000544093 CARD11Q9BXL7 1154 aa33.09■■■□□ 2.89
CHFR-222ENST00000544093 ACEP12821 1306 aa33.07■■■□□ 2.88
CHFR-222ENST00000544093 PPIP5K1Q6PFW1 1433 aa33.07■■■□□ 2.88
CHFR-222ENST00000544093 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.06■■■□□ 2.88
CHFR-222ENST00000544093 PAK3O75914 559 aaPredicted RBP33.06■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms