RNA–Protein interactions for RNA: ENST00000543558.1

LINC02460-201, Transcript of long intergenic non-protein coding RNA 2460, humanhuman

TSL 4 BASIC

Gene LINC02460, Length 536 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02460-201ENST00000543558 BRICD5Q6PL45 260 aa8.32□□□□□ -1.08
LINC02460-201ENST00000543558 SULF1Q8IWU6 871 aa8.32□□□□□ -1.08
LINC02460-201ENST00000543558 CCDC102AQ96A19 550 aa8.32□□□□□ -1.08
LINC02460-201ENST00000543558 TRIM66O15016 1216 aa8.31□□□□□ -1.08
LINC02460-201ENST00000543558 RPIAP49247 311 aa8.31□□□□□ -1.08
LINC02460-201ENST00000543558 AAASQ9NRG9 546 aa8.31□□□□□ -1.08
LINC02460-201ENST00000543558 BRPF1P55201 1214 aaPredicted RBP8.3□□□□□ -1.08
LINC02460-201ENST00000543558 SALL2Q9Y467 1007 aaPredicted RBP8.3□□□□□ -1.08
LINC02460-201ENST00000543558 NEUROD2Q15784 382 aa8.29□□□□□ -1.08
LINC02460-201ENST00000543558 CD46P15529 392 aa8.28□□□□□ -1.08
LINC02460-201ENST00000543558 TOR4AQ9NXH8 423 aa8.28□□□□□ -1.08
LINC02460-201ENST00000543558 DACH1Q9UI36 760 aa8.28□□□□□ -1.08
LINC02460-201ENST00000543558 PDE4DQ08499 809 aa8.27□□□□□ -1.09
LINC02460-201ENST00000543558 MSS51Q4VC12 460 aa8.27□□□□□ -1.09
LINC02460-201ENST00000543558 CD2BP2O95400 341 aaKnown RBP8.26□□□□□ -1.09
LINC02460-201ENST00000543558 HLA-CQ95604 372 aa8.25□□□□□ -1.09
LINC02460-201ENST00000543558 AVPP01185 164 aa8.24□□□□□ -1.09
LINC02460-201ENST00000543558 AMHR2Q16671 573 aa8.24□□□□□ -1.09
LINC02460-201ENST00000543558 GRIPAP1Q4V328 841 aa8.24□□□□□ -1.09
LINC02460-201ENST00000543558 GPBP1L1Q9HC44 474 aaPredicted RBP8.24□□□□□ -1.09
LINC02460-201ENST00000543558 MMP16P51512 607 aa8.23□□□□□ -1.09
LINC02460-201ENST00000543558 MDM2Q00987 491 aaPredicted RBP8.23□□□□□ -1.09
LINC02460-201ENST00000543558 CYP4X1Q8N118 509 aa8.23□□□□□ -1.09
LINC02460-201ENST00000543558 CRIPAKQ8N1N5 446 aa8.23□□□□□ -1.09
LINC02460-201ENST00000543558 ZBTB24O43167 697 aaPredicted RBP8.22□□□□□ -1.09
LINC02460-201ENST00000543558 KDM4AO75164 1064 aa8.22□□□□□ -1.09
LINC02460-201ENST00000543558 Q3C1V9 767 aa8.21□□□□□ -1.1
LINC02460-201ENST00000543558 GUCA2AQ02747 115 aa8.2□□□□□ -1.1
LINC02460-201ENST00000543558 PARP9Q8IXQ6 854 aa8.2□□□□□ -1.1
LINC02460-201ENST00000543558 USB1Q9BQ65 265 aaKnown RBP8.2□□□□□ -1.1
LINC02460-201ENST00000543558 KDM4CQ9H3R0 1056 aa8.2□□□□□ -1.1
LINC02460-201ENST00000543558 DXOO77932 396 aaKnown RBP8.19□□□□□ -1.1
LINC02460-201ENST00000543558 TRIM32Q13049 653 aa8.19□□□□□ -1.1
LINC02460-201ENST00000543558 TTLL12Q14166 644 aaPredicted RBP8.19□□□□□ -1.1
LINC02460-201ENST00000543558 LCE2AQ5TA79 106 aaPredicted RBP8.19□□□□□ -1.1
LINC02460-201ENST00000543558 GMPR2Q9P2T1 348 aaKnown RBP8.19□□□□□ -1.1
LINC02460-201ENST00000543558 TTC24A2A3L6 582 aaPredicted RBP8.18□□□□□ -1.1
LINC02460-201ENST00000543558 WNT7AO00755 349 aa8.18□□□□□ -1.1
LINC02460-201ENST00000543558 AXIN1O15169 862 aa8.18□□□□□ -1.1
LINC02460-201ENST00000543558 HOXA2O43364 376 aa8.18□□□□□ -1.1
LINC02460-201ENST00000543558 REPIN1Q9BWE0 567 aaKnown RBP8.18□□□□□ -1.1
LINC02460-201ENST00000543558 SMPD1P17405 629 aa8.17□□□□□ -1.1
LINC02460-201ENST00000543558 CLCN1P35523 988 aa8.17□□□□□ -1.1
LINC02460-201ENST00000543558 SMCPP49901 116 aaPredicted RBP8.17□□□□□ -1.1
LINC02460-201ENST00000543558 SYMPKQ92797 1274 aaKnown RBP8.17□□□□□ -1.1
LINC02460-201ENST00000543558 MRGPRX2Q96LB1 330 aa8.17□□□□□ -1.1
LINC02460-201ENST00000543558 J3QL48 77 aa8.16□□□□□ -1.1
LINC02460-201ENST00000543558 TMEM132AQ24JP5 1023 aa8.16□□□□□ -1.1
LINC02460-201ENST00000543558 CTC1Q2NKJ3 1217 aa8.16□□□□□ -1.1
LINC02460-201ENST00000543558 TREML4Q6UXN2 200 aa8.16□□□□□ -1.1
LINC02460-201ENST00000543558 GIGYF2Q6Y7W6 1299 aaKnown RBP8.16□□□□□ -1.1
LINC02460-201ENST00000543558 SNIP1Q8TAD8 396 aaKnown RBP8.16□□□□□ -1.1
LINC02460-201ENST00000543558 GPCPD1Q9NPB8 672 aa8.16□□□□□ -1.1
LINC02460-201ENST00000543558 USP46P62068 366 aa8.15□□□□□ -1.1
LINC02460-201ENST00000543558 SKOR1P84550 965 aa8.15□□□□□ -1.1
LINC02460-201ENST00000543558 CCDC24Q8N4L8 307 aa8.15□□□□□ -1.1
LINC02460-201ENST00000543558 FAM217BQ9NTX9 383 aaPredicted RBP8.15□□□□□ -1.1
LINC02460-201ENST00000543558 C11orf95C9JLR9 678 aaPredicted RBP8.13□□□□□ -1.11
LINC02460-201ENST00000543558 IL27Q8NEV9 243 aa8.13□□□□□ -1.11
LINC02460-201ENST00000543558 FAM117AQ9C073 453 aa8.13□□□□□ -1.11
LINC02460-201ENST00000543558 MS4A1P11836 297 aa8.12□□□□□ -1.11
LINC02460-201ENST00000543558 JUNDP17535 347 aa8.11□□□□□ -1.11
LINC02460-201ENST00000543558 SSTR3P32745 418 aaPredicted RBP8.11□□□□□ -1.11
LINC02460-201ENST00000543558 RC3H1Q5TC82 1133 aaKnown RBP8.11□□□□□ -1.11
LINC02460-201ENST00000543558 HPS1Q92902 700 aa8.11□□□□□ -1.11
LINC02460-201ENST00000543558 PCDHGC3Q9UN70 934 aa8.11□□□□□ -1.11
LINC02460-201ENST00000543558 PTCRAQ6ISU1 281 aaPredicted RBP8.1□□□□□ -1.11
LINC02460-201ENST00000543558 DDRGK1Q96HY6 314 aa8.1□□□□□ -1.11
LINC02460-201ENST00000543558 ATP13A2Q9NQ11 1180 aa8.1□□□□□ -1.11
LINC02460-201ENST00000543558 SNRPBP14678 240 aaKnown RBP8.09□□□□□ -1.11
LINC02460-201ENST00000543558 PLEKHG3A1L390 1219 aa8.08□□□□□ -1.12
LINC02460-201ENST00000543558 WNT7BP56706 349 aa8.08□□□□□ -1.12
LINC02460-201ENST00000543558 NUTM1Q86Y26 1132 aa8.08□□□□□ -1.12
LINC02460-201ENST00000543558 NFX1Q12986 1120 aaKnown RBP8.07□□□□□ -1.12
LINC02460-201ENST00000543558 RETREG3Q86VR2 466 aa8.07□□□□□ -1.12
LINC02460-201ENST00000543558 NUDT12Q9BQG2 462 aa8.07□□□□□ -1.12
LINC02460-201ENST00000543558 WFS1O76024 890 aa8.06□□□□□ -1.12
LINC02460-201ENST00000543558 FDX1P10109 184 aa8.06□□□□□ -1.12
LINC02460-201ENST00000543558 LCE2CQ5TA81 110 aa8.06□□□□□ -1.12
LINC02460-201ENST00000543558 BEGAINQ9BUH8 593 aa8.06□□□□□ -1.12
LINC02460-201ENST00000543558 SIAH2O43255 324 aa8.05□□□□□ -1.12
LINC02460-201ENST00000543558 NDUFV2P19404 249 aa8.05□□□□□ -1.12
LINC02460-201ENST00000543558 SPIRE2Q8WWL2 714 aa8.05□□□□□ -1.12
LINC02460-201ENST00000543558 C6orf229H3BNL8 230 aa8.04□□□□□ -1.12
LINC02460-201ENST00000543558 ALDH1A1P00352 501 aa8.04□□□□□ -1.12
LINC02460-201ENST00000543558 TRIM47Q96LD4 638 aa8.04□□□□□ -1.12
LINC02460-201ENST00000543558 MOXD2PA6NHM9 499 aa8.03□□□□□ -1.12
LINC02460-201ENST00000543558 CCNYL3P0C7X3 344 aa8.01□□□□□ -1.13
LINC02460-201ENST00000543558 SH3BP2P78314 561 aa8.01□□□□□ -1.13
LINC02460-201ENST00000543558 EHBP1Q8NDI1 1231 aa8.01□□□□□ -1.13
LINC02460-201ENST00000543558 SENP2Q9HC62 589 aa8□□□□□ -1.13
LINC02460-201ENST00000543558 PRR7Q8TB68 274 aa7.99□□□□□ -1.13
LINC02460-201ENST00000543558 RSPH6AQ9H0K4 717 aa7.99□□□□□ -1.13
LINC02460-201ENST00000543558 UNC93B1Q9H1C4 597 aa7.99□□□□□ -1.13
LINC02460-201ENST00000543558 EVA1BQ9NVM1 165 aa7.99□□□□□ -1.13
LINC02460-201ENST00000543558 GTF3C3Q9Y5Q9 886 aa7.99□□□□□ -1.13
LINC02460-201ENST00000543558 TERTO14746 1132 aaKnown RBP7.98□□□□□ -1.13
LINC02460-201ENST00000543558 WIPF1O43516 503 aa7.98□□□□□ -1.13
LINC02460-201ENST00000543558 BMP1P13497 986 aa7.98□□□□□ -1.13
LINC02460-201ENST00000543558 DIXDC1Q155Q3 683 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms