RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 RBM33Q96EV2 1170 aaKnown RBP8.52□□□□□ -1.04
SRGAP1-206ENST00000543397 TRIM34Q9BYJ4 488 aa8.52□□□□□ -1.04
SRGAP1-206ENST00000543397 SMG6Q86US8 1419 aaKnown RBP8.52□□□□□ -1.05
SRGAP1-206ENST00000543397 PLEKHO1Q53GL0 409 aaPredicted RBP8.52□□□□□ -1.05
SRGAP1-206ENST00000543397 ZBTB22O15209 634 aa8.52□□□□□ -1.05
SRGAP1-206ENST00000543397 IGSF3O75054 1194 aa8.52□□□□□ -1.05
SRGAP1-206ENST00000543397 TATP17735 454 aaPredicted RBP8.52□□□□□ -1.05
SRGAP1-206ENST00000543397 TCERG1O14776 1098 aaKnown RBP8.52□□□□□ -1.05
SRGAP1-206ENST00000543397 DNTTIP2Q5QJE6 756 aaKnown RBP8.52□□□□□ -1.05
SRGAP1-206ENST00000543397 MFAP1P55081 439 aaKnown RBP8.51□□□□□ -1.05
SRGAP1-206ENST00000543397 GAS2L2Q8NHY3 880 aa8.51□□□□□ -1.05
SRGAP1-206ENST00000543397 CCDC34Q96HJ3 373 aa8.51□□□□□ -1.05
SRGAP1-206ENST00000543397 CDK19Q9BWU1 502 aa8.51□□□□□ -1.05
SRGAP1-206ENST00000543397 RIC3Q7Z5B4 369 aa8.51□□□□□ -1.05
SRGAP1-206ENST00000543397 EPRSP07814 1512 aaKnown RBP8.51□□□□□ -1.05
SRGAP1-206ENST00000543397 MTHFSP49914 203 aa8.51□□□□□ -1.05
SRGAP1-206ENST00000543397 ANKRD30BQ9BXX2 1392 aa8.51□□□□□ -1.05
SRGAP1-206ENST00000543397 ADGRL1O94910 1474 aa8.51□□□□□ -1.05
SRGAP1-206ENST00000543397 KIAA1107Q9UPP5 1409 aa8.51□□□□□ -1.05
SRGAP1-206ENST00000543397 AIMP1Q12904 312 aaKnown RBP8.5□□□□□ -1.05
SRGAP1-206ENST00000543397 RASSF8Q8NHQ8 419 aa8.5□□□□□ -1.05
SRGAP1-206ENST00000543397 RILPL2Q969X0 211 aa8.5□□□□□ -1.05
SRGAP1-206ENST00000543397 RBM42Q9BTD8 480 aaKnown RBP8.5□□□□□ -1.05
SRGAP1-206ENST00000543397 ARHGEF11O15085 1522 aa8.5□□□□□ -1.05
SRGAP1-206ENST00000543397 RTEL1-TNFRSF6BF6WH68 1400 aa8.5□□□□□ -1.05
SRGAP1-206ENST00000543397 KIF7Q2M1P5 1343 aa8.5□□□□□ -1.05
SRGAP1-206ENST00000543397 CABP1Q9NZU7 370 aa8.5□□□□□ -1.05
SRGAP1-206ENST00000543397 KIF3AQ9Y496 699 aa8.5□□□□□ -1.05
SRGAP1-206ENST00000543397 PLB1Q6P1J6 1458 aa8.5□□□□□ -1.05
SRGAP1-206ENST00000543397 CDK13Q14004 1512 aaKnown RBP8.5□□□□□ -1.05
SRGAP1-206ENST00000543397 ERBINQ96RT1 1412 aa8.5□□□□□ -1.05
SRGAP1-206ENST00000543397 ROCK1Q13464 1354 aa8.5□□□□□ -1.05
SRGAP1-206ENST00000543397 MARCH6O60337 910 aa8.49□□□□□ -1.05
SRGAP1-206ENST00000543397 G3BP1Q13283 466 aaKnown RBP eCLIP8.49□□□□□ -1.05
SRGAP1-206ENST00000543397 ANKRD45Q5TZF3 282 aa8.49□□□□□ -1.05
SRGAP1-206ENST00000543397 VPS53Q5VIR6 699 aa8.49□□□□□ -1.05
SRGAP1-206ENST00000543397 NBPF1Q3BBV0 1214 aa8.49□□□□□ -1.05
SRGAP1-206ENST00000543397 IFIT2P09913 472 aaKnown RBP8.49□□□□□ -1.05
SRGAP1-206ENST00000543397 CCDC7Q96M83 1385 aa8.49□□□□□ -1.05
SRGAP1-206ENST00000543397 DDX19BQ9UMR2 479 aa8.49□□□□□ -1.05
SRGAP1-206ENST00000543397 DMRT2Q9Y5R5 561 aa8.49□□□□□ -1.05
SRGAP1-206ENST00000543397 DAPK1P53355 1430 aa8.49□□□□□ -1.05
SRGAP1-206ENST00000543397 CCDC141Q6ZP82 1450 aa8.49□□□□□ -1.05
SRGAP1-206ENST00000543397 NOP58Q9Y2X3 529 aaKnown RBP8.49□□□□□ -1.05
SRGAP1-206ENST00000543397 DDX54Q8TDD1 881 aaKnown RBP8.48□□□□□ -1.05
SRGAP1-206ENST00000543397 SLC12A5Q9H2X9 1139 aa8.48□□□□□ -1.05
SRGAP1-206ENST00000543397 DIAPH3Q9NSV4 1193 aa8.48□□□□□ -1.05
SRGAP1-206ENST00000543397 CTDP1Q9Y5B0 961 aaPredicted RBP8.48□□□□□ -1.05
SRGAP1-206ENST00000543397 ZNF608Q9ULD9 1512 aaPredicted RBP8.48□□□□□ -1.05
SRGAP1-206ENST00000543397 GZF1Q9H116 711 aaPredicted RBP8.48□□□□□ -1.05
SRGAP1-206ENST00000543397 COG6Q9Y2V7 657 aa8.48□□□□□ -1.05
SRGAP1-206ENST00000543397 URB2Q14146 1524 aaKnown RBP8.48□□□□□ -1.05
SRGAP1-206ENST00000543397 KIF16BQ96L93 1317 aa8.48□□□□□ -1.05
SRGAP1-206ENST00000543397 XPCQ01831 940 aaPredicted RBP8.48□□□□□ -1.05
SRGAP1-206ENST00000543397 ANO8Q9HCE9 1232 aaPredicted RBP8.47□□□□□ -1.05
SRGAP1-206ENST00000543397 CEBPAP49715 358 aaPredicted RBP8.47□□□□□ -1.05
SRGAP1-206ENST00000543397 AKAP17AQ02040 695 aaKnown RBP8.47□□□□□ -1.05
SRGAP1-206ENST00000543397 DZIP1LQ8IYY4 767 aaKnown RBP8.47□□□□□ -1.05
SRGAP1-206ENST00000543397 GBP4Q96PP9 640 aa8.47□□□□□ -1.05
SRGAP1-206ENST00000543397 CUL7Q14999 1698 aa8.47□□□□□ -1.05
SRGAP1-206ENST00000543397 PRKAR2BP31323 418 aa8.47□□□□□ -1.05
SRGAP1-206ENST00000543397 HSP90AB4PQ58FF6 505 aa8.47□□□□□ -1.05
SRGAP1-206ENST00000543397 SYNE3Q6ZMZ3 975 aa8.47□□□□□ -1.05
SRGAP1-206ENST00000543397 DENND4BO75064 1496 aaPredicted RBP8.47□□□□□ -1.05
SRGAP1-206ENST00000543397 AKNAQ7Z591 1439 aa8.47□□□□□ -1.05
SRGAP1-206ENST00000543397 RUFY2Q8WXA3 655 aa8.47□□□□□ -1.05
SRGAP1-206ENST00000543397 CHMP4CQ96CF2 233 aa8.47□□□□□ -1.05
SRGAP1-206ENST00000543397 SPG7Q9UQ90 795 aa8.47□□□□□ -1.05
SRGAP1-206ENST00000543397 FAM177BA6PVY3 158 aa8.46□□□□□ -1.05
SRGAP1-206ENST00000543397 ST18O60284 1047 aa8.46□□□□□ -1.05
SRGAP1-206ENST00000543397 KIF6Q6ZMV9 814 aa8.46□□□□□ -1.05
SRGAP1-206ENST00000543397 CCDC61Q9Y6R9 512 aa8.46□□□□□ -1.05
SRGAP1-206ENST00000543397 SUPT6HQ7KZ85 1726 aaKnown RBP8.46□□□□□ -1.05
SRGAP1-206ENST00000543397 ATAD2Q6PL18 1390 aa8.46□□□□□ -1.05
SRGAP1-206ENST00000543397 CABP4P57796 275 aa8.46□□□□□ -1.06
SRGAP1-206ENST00000543397 ZNF530Q6P9A1 599 aaPredicted RBP8.46□□□□□ -1.06
SRGAP1-206ENST00000543397 CIZ1Q9ULV3 898 aaPredicted RBP8.46□□□□□ -1.06
SRGAP1-206ENST00000543397 ZC3H6P61129 1189 aaKnown RBP8.46□□□□□ -1.06
SRGAP1-206ENST00000543397 CPLX2Q6PUV4 134 aaKnown RBP8.46□□□□□ -1.06
SRGAP1-206ENST00000543397 ZFP91Q96JP5 570 aaPredicted RBP8.46□□□□□ -1.06
SRGAP1-206ENST00000543397 ZBED9Q6R2W3 1325 aa8.46□□□□□ -1.06
SRGAP1-206ENST00000543397 PLIN1O60240 522 aa8.45□□□□□ -1.06
SRGAP1-206ENST00000543397 CALRP27797 417 aaKnown RBP8.45□□□□□ -1.06
SRGAP1-206ENST00000543397 TIAM1Q13009 1591 aa8.45□□□□□ -1.06
SRGAP1-206ENST00000543397 SULT6B1Q6IMI4 303 aa8.45□□□□□ -1.06
SRGAP1-206ENST00000543397 DRC7Q8IY82 874 aa8.45□□□□□ -1.06
SRGAP1-206ENST00000543397 CHAF1AQ13111 956 aaPredicted RBP8.45□□□□□ -1.06
SRGAP1-206ENST00000543397 CCDC30Q5VVM6 783 aa8.45□□□□□ -1.06
SRGAP1-206ENST00000543397 SLKQ9H2G2 1235 aaPredicted RBP8.45□□□□□ -1.06
SRGAP1-206ENST00000543397 TICAM2Q86XR7 235 aa8.45□□□□□ -1.06
SRGAP1-206ENST00000543397 UBTFL1P0CB47 393 aaPredicted RBP8.44□□□□□ -1.06
SRGAP1-206ENST00000543397 HMGB2P26583 209 aaKnown RBP8.44□□□□□ -1.06
SRGAP1-206ENST00000543397 NEUROD6Q96NK8 337 aa8.44□□□□□ -1.06
SRGAP1-206ENST00000543397 PPP6R1Q9UPN7 881 aa8.44□□□□□ -1.06
SRGAP1-206ENST00000543397 TCP11L2Q8N4U5 519 aa8.44□□□□□ -1.06
SRGAP1-206ENST00000543397 NUDT16Q96DE0 195 aaKnown RBP8.44□□□□□ -1.06
SRGAP1-206ENST00000543397 MTMR7Q9Y216 660 aa8.44□□□□□ -1.06
SRGAP1-206ENST00000543397 DHX16O60231 1041 aaKnown RBP8.44□□□□□ -1.06
SRGAP1-206ENST00000543397 TRDNQ13061 729 aa8.44□□□□□ -1.06
SRGAP1-206ENST00000543397 KCNH5Q8NCM2 988 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 208.3 ms