RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 SBNO2Q9Y2G9 1366 aa15.11■□□□□ 0.01
NPIPB3-210ENST00000542817 ADGRL3Q9HAR2 1447 aa15.1■□□□□ 0.01
NPIPB3-210ENST00000542817 HIRIP3Q9BW71 556 aaPredicted RBP15.1■□□□□ 0.01
NPIPB3-210ENST00000542817 POGKQ9P215 609 aa15.1■□□□□ 0.01
NPIPB3-210ENST00000542817 TULP4Q9NRJ4 1543 aa15.09■□□□□ 0.01
NPIPB3-210ENST00000542817 QRICH2Q9H0J4 1663 aa15.09■□□□□ 0.01
NPIPB3-210ENST00000542817 ADGRB2O60241 1585 aa15.09■□□□□ 0.01
NPIPB3-210ENST00000542817 EIF3AQ14152 1382 aaKnown RBP15.09■□□□□ 0.01
NPIPB3-210ENST00000542817 EIF4G2P78344 907 aaKnown RBP eCLIP15.09■□□□□ 0.01
NPIPB3-210ENST00000542817 MINK1Q8N4C8 1332 aaPredicted RBP15.08■□□□□ 0.01
NPIPB3-210ENST00000542817 C11orf95C9JLR9 678 aaPredicted RBP15.07■□□□□ 0
NPIPB3-210ENST00000542817 C19orf44Q9H6X5 657 aa15.07■□□□□ 0
NPIPB3-210ENST00000542817 DISP3Q9P2K9 1392 aa15.05■□□□□ 0
NPIPB3-210ENST00000542817 WASLO00401 505 aaPredicted RBP15.05■□□□□ -0
NPIPB3-210ENST00000542817 CDC42BPGQ6DT37 1551 aa15.05■□□□□ -0
NPIPB3-210ENST00000542817 CERKQ8TCT0 537 aa15.05■□□□□ -0
NPIPB3-210ENST00000542817 PRR36Q9H6K5 1346 aa15.05■□□□□ -0
NPIPB3-210ENST00000542817 DCCP43146 1447 aa15.04■□□□□ -0
NPIPB3-210ENST00000542817 CDK19Q9BWU1 502 aa15.03■□□□□ -0
NPIPB3-210ENST00000542817 IQSEC2Q5JU85 1478 aa15.03■□□□□ -0
NPIPB3-210ENST00000542817 USP32Q8NFA0 1604 aa15.02■□□□□ -0
NPIPB3-210ENST00000542817 MST1RQ04912 1400 aa15.02■□□□□ -0
NPIPB3-210ENST00000542817 FMN2Q9NZ56 1722 aa15.01□□□□□ -0.01
NPIPB3-210ENST00000542817 MSH6P52701 1360 aa15.01□□□□□ -0.01
NPIPB3-210ENST00000542817 ATP7BP35670 1465 aa15.01□□□□□ -0.01
NPIPB3-210ENST00000542817 CABP2Q9NPB3 220 aa15□□□□□ -0.01
NPIPB3-210ENST00000542817 C14orf37Q86TY3 774 aa14.99□□□□□ -0.01
NPIPB3-210ENST00000542817 C1orf167Q5SNV9 1468 aa14.99□□□□□ -0.01
NPIPB3-210ENST00000542817 CADPS2Q86UW7 1296 aa14.98□□□□□ -0.01
NPIPB3-210ENST00000542817 PUS7Q96PZ0 661 aaKnown RBP14.98□□□□□ -0.01
NPIPB3-210ENST00000542817 EVC2Q86UK5 1308 aa14.98□□□□□ -0.01
NPIPB3-210ENST00000542817 NUTM2FA1L443 756 aa14.97□□□□□ -0.01
NPIPB3-210ENST00000542817 NUDT16Q96DE0 195 aaKnown RBP14.97□□□□□ -0.01
NPIPB3-210ENST00000542817 ANKARQ7Z5J8 1434 aa14.97□□□□□ -0.01
NPIPB3-210ENST00000542817 KIF7Q2M1P5 1343 aa14.96□□□□□ -0.01
NPIPB3-210ENST00000542817 WASHC2AQ641Q2 1341 aa14.96□□□□□ -0.01
NPIPB3-210ENST00000542817 ATF3P18847 181 aa14.96□□□□□ -0.01
NPIPB3-210ENST00000542817 TMF1P82094 1093 aa14.96□□□□□ -0.01
NPIPB3-210ENST00000542817 SLAIN2Q9P270 581 aa14.96□□□□□ -0.01
NPIPB3-210ENST00000542817 ORAI2Q96SN7 254 aa14.95□□□□□ -0.02
NPIPB3-210ENST00000542817 RGPD8O14715 1765 aaPredicted RBP14.95□□□□□ -0.02
NPIPB3-210ENST00000542817 TOPAZ1Q8N9V7 1692 aa14.95□□□□□ -0.02
NPIPB3-210ENST00000542817 SRPK2P78362 688 aaKnown RBP14.94□□□□□ -0.02
NPIPB3-210ENST00000542817 CD163L1Q9NR16 1453 aa14.94□□□□□ -0.02
NPIPB3-210ENST00000542817 CCDC7Q96M83 1385 aa14.94□□□□□ -0.02
NPIPB3-210ENST00000542817 SLC24A1O60721 1099 aa14.93□□□□□ -0.02
NPIPB3-210ENST00000542817 CCDC61Q9Y6R9 512 aa14.93□□□□□ -0.02
NPIPB3-210ENST00000542817 PLEKHG3A1L390 1219 aa14.92□□□□□ -0.02
NPIPB3-210ENST00000542817 BRINP3Q76B58 766 aa14.92□□□□□ -0.02
NPIPB3-210ENST00000542817 SLC12A5Q9H2X9 1139 aa14.92□□□□□ -0.02
NPIPB3-210ENST00000542817 ATAD2Q6PL18 1390 aa14.92□□□□□ -0.02
NPIPB3-210ENST00000542817 CABP1Q9NZU7 370 aa14.92□□□□□ -0.02
NPIPB3-210ENST00000542817 MYOM1P52179 1685 aa14.91□□□□□ -0.02
NPIPB3-210ENST00000542817 UBAP1LF5GYI3 381 aa14.91□□□□□ -0.02
NPIPB3-210ENST00000542817 PPIP5K1Q6PFW1 1433 aa14.9□□□□□ -0.02
NPIPB3-210ENST00000542817 TOM1O60784 492 aa14.9□□□□□ -0.02
NPIPB3-210ENST00000542817 ESCO1Q5FWF5 840 aa14.9□□□□□ -0.02
NPIPB3-210ENST00000542817 PHF8Q9UPP1 1060 aa14.9□□□□□ -0.02
NPIPB3-210ENST00000542817 POLR3AO14802 1390 aaPredicted RBP14.89□□□□□ -0.03
NPIPB3-210ENST00000542817 CPSF1Q10570 1443 aaKnown RBP14.89□□□□□ -0.03
NPIPB3-210ENST00000542817 CDCA8Q53HL2 280 aa14.89□□□□□ -0.03
NPIPB3-210ENST00000542817 PMFBP1Q8TBY8 1022 aa14.89□□□□□ -0.03
NPIPB3-210ENST00000542817 DDX17Q92841 729 aaKnown RBP14.89□□□□□ -0.03
NPIPB3-210ENST00000542817 ROBO1Q9Y6N7 1651 aa14.88□□□□□ -0.03
NPIPB3-210ENST00000542817 ACEP12821 1306 aa14.87□□□□□ -0.03
NPIPB3-210ENST00000542817 SSH2Q76I76 1423 aa14.87□□□□□ -0.03
NPIPB3-210ENST00000542817 ZNF316A6NFI3 1004 aaPredicted RBP14.87□□□□□ -0.03
NPIPB3-210ENST00000542817 CARD14Q9BXL6 1004 aa14.87□□□□□ -0.03
NPIPB3-210ENST00000542817 A0A1W2PP64 1363 aa14.86□□□□□ -0.03
NPIPB3-210ENST00000542817 ITSN1Q15811 1721 aa14.85□□□□□ -0.03
NPIPB3-210ENST00000542817 FOXO3O43524 673 aa14.85□□□□□ -0.03
NPIPB3-210ENST00000542817 NINLQ9Y2I6 1382 aa14.85□□□□□ -0.03
NPIPB3-210ENST00000542817 PXDNQ92626 1479 aa14.85□□□□□ -0.03
NPIPB3-210ENST00000542817 NHSL1Q5SYE7 1610 aa14.84□□□□□ -0.03
NPIPB3-210ENST00000542817 KIF1AQ12756 1690 aa14.84□□□□□ -0.03
NPIPB3-210ENST00000542817 ANKRD36BQ8N2N9 1353 aa14.84□□□□□ -0.03
NPIPB3-210ENST00000542817 PIP4K2BP78356 416 aa14.84□□□□□ -0.03
NPIPB3-210ENST00000542817 TMC1Q8TDI8 760 aa14.84□□□□□ -0.03
NPIPB3-210ENST00000542817 AHDC1Q5TGY3 1603 aaPredicted RBP14.84□□□□□ -0.03
NPIPB3-210ENST00000542817 SOS2Q07890 1332 aaPredicted RBP14.83□□□□□ -0.03
NPIPB3-210ENST00000542817 POLR3GLQ9BT43 218 aa14.83□□□□□ -0.04
NPIPB3-210ENST00000542817 AKAP12Q02952 1782 aa14.83□□□□□ -0.04
NPIPB3-210ENST00000542817 PER1O15534 1290 aaPredicted RBP14.82□□□□□ -0.04
NPIPB3-210ENST00000542817 XPCQ01831 940 aaPredicted RBP14.82□□□□□ -0.04
NPIPB3-210ENST00000542817 PANK3Q9H999 370 aa14.82□□□□□ -0.04
NPIPB3-210ENST00000542817 USP6P35125 1406 aa14.82□□□□□ -0.04
NPIPB3-210ENST00000542817 NGDNQ8NEJ9 315 aaKnown RBP14.81□□□□□ -0.04
NPIPB3-210ENST00000542817 TRPM3Q9HCF6 1732 aaPredicted RBP14.81□□□□□ -0.04
NPIPB3-210ENST00000542817 MON2Q7Z3U7 1717 aa14.8□□□□□ -0.04
NPIPB3-210ENST00000542817 NRKQ7Z2Y5 1582 aa14.8□□□□□ -0.04
NPIPB3-210ENST00000542817 KRT28Q7Z3Y7 464 aa14.8□□□□□ -0.04
NPIPB3-210ENST00000542817 NPHP3Q7Z494 1330 aa14.8□□□□□ -0.04
NPIPB3-210ENST00000542817 COL16A1Q07092 1604 aaPredicted RBP14.79□□□□□ -0.04
NPIPB3-210ENST00000542817 ZNF692Q9BU19 519 aaPredicted RBP14.79□□□□□ -0.04
NPIPB3-210ENST00000542817 KTN1Q86UP2 1357 aaKnown RBP14.79□□□□□ -0.04
NPIPB3-210ENST00000542817 FBXO41Q8TF61 875 aa14.78□□□□□ -0.04
NPIPB3-210ENST00000542817 TERF2IPQ9NYB0 399 aa14.78□□□□□ -0.04
NPIPB3-210ENST00000542817 TTC21BQ7Z4L5 1316 aa14.78□□□□□ -0.04
NPIPB3-210ENST00000542817 SBNO1A3KN83 1393 aa14.78□□□□□ -0.04
NPIPB3-210ENST00000542817 EDC4Q6P2E9 1401 aaKnown RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 348.7 ms