RNA–Protein interactions for RNA: ENST00000541938.1

SAMD1-203, Transcript of sterile alpha motif domain containing 1, humanhuman

TSL 3

Gene SAMD1, Length 143 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-203ENST00000541938 ORAI2Q96SN7 254 aa28.1■■■□□ 2.09
SAMD1-203ENST00000541938 PHF23Q9BUL5 403 aaPredicted RBP28.1■■■□□ 2.09
SAMD1-203ENST00000541938 SIN3AQ96ST3 1273 aa28.09■■■□□ 2.09
SAMD1-203ENST00000541938 COL16A1Q07092 1604 aaPredicted RBP28.09■■■□□ 2.09
SAMD1-203ENST00000541938 DDX17Q92841 729 aaKnown RBP28.08■■■□□ 2.09
SAMD1-203ENST00000541938 PRAM1Q96QH2 718 aa28.07■■■□□ 2.08
SAMD1-203ENST00000541938 TRAK1Q9UPV9 953 aa28.06■■■□□ 2.08
SAMD1-203ENST00000541938 ADGRB1O14514 1584 aa28.06■■■□□ 2.08
SAMD1-203ENST00000541938 SAFB2Q14151 953 aaKnown RBP eCLIP28.05■■■□□ 2.08
SAMD1-203ENST00000541938 POGKQ9P215 609 aa28.05■■■□□ 2.08
SAMD1-203ENST00000541938 CDC42BPGQ6DT37 1551 aa28.04■■■□□ 2.08
SAMD1-203ENST00000541938 NUTM2FA1L443 756 aa28.04■■■□□ 2.08
SAMD1-203ENST00000541938 NEUROD1Q13562 356 aa28.03■■■□□ 2.08
SAMD1-203ENST00000541938 ESCO1Q5FWF5 840 aa28.03■■■□□ 2.08
SAMD1-203ENST00000541938 DLC1Q96QB1 1528 aa28.01■■■□□ 2.07
SAMD1-203ENST00000541938 L3MBTL2Q969R5 705 aa28■■■□□ 2.07
SAMD1-203ENST00000541938 LRRC59Q96AG4 307 aaKnown RBP28■■■□□ 2.07
SAMD1-203ENST00000541938 NHSL1Q5SYE7 1610 aa27.99■■■□□ 2.07
SAMD1-203ENST00000541938 SPATA31A6Q5VVP1 1343 aa27.97■■■□□ 2.07
SAMD1-203ENST00000541938 RGS17Q9UGC6 210 aaPredicted RBP27.95■■■□□ 2.06
SAMD1-203ENST00000541938 SOS2Q07890 1332 aaPredicted RBP27.94■■■□□ 2.06
SAMD1-203ENST00000541938 NBPF1Q3BBV0 1214 aa27.94■■■□□ 2.06
SAMD1-203ENST00000541938 FOXO3O43524 673 aa27.92■■■□□ 2.06
SAMD1-203ENST00000541938 MINK1Q8N4C8 1332 aaPredicted RBP27.92■■■□□ 2.06
SAMD1-203ENST00000541938 NUTM2BA6NNL0 878 aaPredicted RBP27.91■■■□□ 2.06
SAMD1-203ENST00000541938 NUTM2EB1AL46 878 aaPredicted RBP27.91■■■□□ 2.06
SAMD1-203ENST00000541938 NUTM2AQ8IVF1 878 aaPredicted RBP27.91■■■□□ 2.06
SAMD1-203ENST00000541938 HIRIP3Q9BW71 556 aaPredicted RBP27.91■■■□□ 2.06
SAMD1-203ENST00000541938 FMN2Q9NZ56 1722 aa27.91■■■□□ 2.06
SAMD1-203ENST00000541938 NPHP3Q7Z494 1330 aa27.91■■■□□ 2.06
SAMD1-203ENST00000541938 SHPRHQ149N8 1683 aa27.91■■■□□ 2.06
SAMD1-203ENST00000541938 LRP6O75581 1613 aa27.89■■■□□ 2.05
SAMD1-203ENST00000541938 PNPLA6Q8IY17 1366 aa27.88■■■□□ 2.05
SAMD1-203ENST00000541938 MEX3CQ5U5Q3 659 aaKnown RBP27.88■■■□□ 2.05
SAMD1-203ENST00000541938 XPCQ01831 940 aaPredicted RBP27.87■■■□□ 2.05
SAMD1-203ENST00000541938 KIAA1210Q9ULL0 1709 aa27.87■■■□□ 2.05
SAMD1-203ENST00000541938 PHF8Q9UPP1 1060 aa27.85■■■□□ 2.05
SAMD1-203ENST00000541938 WASLO00401 505 aaPredicted RBP27.83■■■□□ 2.05
SAMD1-203ENST00000541938 POTEAQ6S8J7 498 aa27.82■■■□□ 2.04
SAMD1-203ENST00000541938 ADGRB2O60241 1585 aa27.82■■■□□ 2.04
SAMD1-203ENST00000541938 PXDNQ92626 1479 aa27.81■■■□□ 2.04
SAMD1-203ENST00000541938 KRT28Q7Z3Y7 464 aa27.8■■■□□ 2.04
SAMD1-203ENST00000541938 ANKARQ7Z5J8 1434 aa27.8■■■□□ 2.04
SAMD1-203ENST00000541938 ARHGEF28Q8N1W1 1705 aaKnown RBP27.8■■■□□ 2.04
SAMD1-203ENST00000541938 RGPD8O14715 1765 aaPredicted RBP27.78■■■□□ 2.04
SAMD1-203ENST00000541938 PMFBP1Q8TBY8 1022 aa27.78■■■□□ 2.04
SAMD1-203ENST00000541938 EIF3AQ14152 1382 aaKnown RBP27.77■■■□□ 2.04
SAMD1-203ENST00000541938 PRR36Q9H6K5 1346 aa27.77■■■□□ 2.04
SAMD1-203ENST00000541938 KIF1AQ12756 1690 aa27.76■■■□□ 2.03
SAMD1-203ENST00000541938 NBPF8Q3BBV2 869 aa27.76■■■□□ 2.03
SAMD1-203ENST00000541938 USP32Q8NFA0 1604 aa27.74■■■□□ 2.03
SAMD1-203ENST00000541938 ADAMTS2O95450 1211 aa27.74■■■□□ 2.03
SAMD1-203ENST00000541938 PSME1Q06323 249 aa27.74■■■□□ 2.03
SAMD1-203ENST00000541938 CDK19Q9BWU1 502 aa27.74■■■□□ 2.03
SAMD1-203ENST00000541938 TONSLQ96HA7 1378 aa27.73■■■□□ 2.03
SAMD1-203ENST00000541938 ZNF772Q68DY9 489 aaPredicted RBP27.73■■■□□ 2.03
SAMD1-203ENST00000541938 TULP4Q9NRJ4 1543 aa27.72■■■□□ 2.03
SAMD1-203ENST00000541938 SPATA31A3Q5VYP0 1347 aa27.72■■■□□ 2.03
SAMD1-203ENST00000541938 CENPJQ9HC77 1338 aaPredicted RBP27.72■■■□□ 2.03
SAMD1-203ENST00000541938 PCGF6Q9BYE7 350 aa27.72■■■□□ 2.03
SAMD1-203ENST00000541938 NUDT16Q96DE0 195 aaKnown RBP27.71■■■□□ 2.03
SAMD1-203ENST00000541938 C8orf37Q96NL8 207 aa27.71■■■□□ 2.03
SAMD1-203ENST00000541938 ROCK2O75116 1388 aaKnown RBP27.71■■■□□ 2.03
SAMD1-203ENST00000541938 AFF2P51816 1311 aa27.69■■■□□ 2.02
SAMD1-203ENST00000541938 TRPM1Q7Z4N2 1603 aa27.69■■■□□ 2.02
SAMD1-203ENST00000541938 NGLY1Q96IV0 654 aa27.67■■■□□ 2.02
SAMD1-203ENST00000541938 COL22A1Q8NFW1 1626 aaPredicted RBP27.67■■■□□ 2.02
SAMD1-203ENST00000541938 NGDNQ8NEJ9 315 aaKnown RBP27.66■■■□□ 2.02
SAMD1-203ENST00000541938 SBNO1A3KN83 1393 aa27.65■■■□□ 2.02
SAMD1-203ENST00000541938 LMOD2Q6P5Q4 547 aa27.64■■■□□ 2.02
SAMD1-203ENST00000541938 TNS3Q68CZ2 1445 aa27.64■■■□□ 2.02
SAMD1-203ENST00000541938 ATP7BP35670 1465 aa27.64■■■□□ 2.01
SAMD1-203ENST00000541938 GPRASP1Q5JY77 1395 aa27.63■■■□□ 2.01
SAMD1-203ENST00000541938 CCDC61Q9Y6R9 512 aa27.62■■■□□ 2.01
SAMD1-203ENST00000541938 SRPK2P78362 688 aaKnown RBP27.61■■■□□ 2.01
SAMD1-203ENST00000541938 PLEKHG5O94827 1062 aa27.6■■■□□ 2.01
SAMD1-203ENST00000541938 CABP2Q9NPB3 220 aa27.6■■■□□ 2.01
SAMD1-203ENST00000541938 CABLES1Q8TDN4 633 aa27.59■■■□□ 2.01
SAMD1-203ENST00000541938 CARD11Q9BXL7 1154 aa27.59■■■□□ 2.01
SAMD1-203ENST00000541938 PLEKHG3A1L390 1219 aa27.57■■■□□ 2
SAMD1-203ENST00000541938 RXRBP28702 533 aa27.57■■■□□ 2
SAMD1-203ENST00000541938 QTRT2Q9H974 415 aaKnown RBP27.57■■■□□ 2
SAMD1-203ENST00000541938 ARHGEF10O15013 1369 aa27.57■■■□□ 2
SAMD1-203ENST00000541938 HAP1P54257 671 aaPredicted RBP27.56■■■□□ 2
SAMD1-203ENST00000541938 FNBP4Q8N3X1 1017 aaPredicted RBP27.56■■■□□ 2
SAMD1-203ENST00000541938 USP21Q9UK80 565 aa27.56■■■□□ 2
SAMD1-203ENST00000541938 QRICH2Q9H0J4 1663 aa27.56■■■□□ 2
SAMD1-203ENST00000541938 PAK3O75914 559 aaPredicted RBP27.55■■■□□ 2
SAMD1-203ENST00000541938 ACEP12821 1306 aa27.55■■■□□ 2
SAMD1-203ENST00000541938 EVC2Q86UK5 1308 aa27.54■■■□□ 2
SAMD1-203ENST00000541938 ITSN1Q15811 1721 aa27.53■■■□□ 2
SAMD1-203ENST00000541938 RALGAPBQ86X10 1494 aa27.53■■■□□ 2
SAMD1-203ENST00000541938 POLR3AO14802 1390 aaPredicted RBP27.52■■■□□ 2
SAMD1-203ENST00000541938 TRPM3Q9HCF6 1732 aaPredicted RBP27.51■■□□□ 1.99
SAMD1-203ENST00000541938 PPIP5K1Q6PFW1 1433 aa27.5■■□□□ 1.99
SAMD1-203ENST00000541938 RBM6P78332 1123 aaKnown RBP27.49■■□□□ 1.99
SAMD1-203ENST00000541938 CABP1Q9NZU7 370 aa27.49■■□□□ 1.99
SAMD1-203ENST00000541938 TOPAZ1Q8N9V7 1692 aa27.49■■□□□ 1.99
SAMD1-203ENST00000541938 TRPC5Q9UL62 973 aaPredicted RBP27.48■■□□□ 1.99
SAMD1-203ENST00000541938 CLSPNQ9HAW4 1339 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms