RNA–Protein interactions for RNA: ENST00000541157.5

MRE11-210, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 4

Gene MRE11, Length 594 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-210ENST00000541157 RIMS2Q9UQ26 1411 aa14.04□□□□□ -0.16
MRE11-210ENST00000541157 DCAF8Q5TAQ9 597 aa14.03□□□□□ -0.16
MRE11-210ENST00000541157 SCAF11Q99590 1463 aaKnown RBP14.03□□□□□ -0.16
MRE11-210ENST00000541157 MYO3AQ8NEV4 1616 aa14.03□□□□□ -0.16
MRE11-210ENST00000541157 POLR1AO95602 1720 aaPredicted RBP14.02□□□□□ -0.16
MRE11-210ENST00000541157 ADGRB1O14514 1584 aa14.02□□□□□ -0.16
MRE11-210ENST00000541157 CFAP70Q5T0N1 1121 aa14.02□□□□□ -0.17
MRE11-210ENST00000541157 C14orf93Q9H972 538 aaKnown RBP14.02□□□□□ -0.17
MRE11-210ENST00000541157 CCDC7Q96M83 1385 aa14□□□□□ -0.17
MRE11-210ENST00000541157 TMEM2Q9UHN6 1383 aa14□□□□□ -0.17
MRE11-210ENST00000541157 WASHC2AQ641Q2 1341 aa14□□□□□ -0.17
MRE11-210ENST00000541157 ST20-MTHFSA0A0A6YYL1 179 aa14□□□□□ -0.17
MRE11-210ENST00000541157 NUTM2DQ5VT03 806 aaPredicted RBP14□□□□□ -0.17
MRE11-210ENST00000541157 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.99□□□□□ -0.17
MRE11-210ENST00000541157 EIF3AQ14152 1382 aaKnown RBP13.98□□□□□ -0.17
MRE11-210ENST00000541157 C11orf95C9JLR9 678 aaPredicted RBP13.98□□□□□ -0.17
MRE11-210ENST00000541157 GSE1Q14687 1217 aa13.98□□□□□ -0.17
MRE11-210ENST00000541157 CIZ1Q9ULV3 898 aaPredicted RBP13.98□□□□□ -0.17
MRE11-210ENST00000541157 CEP170BQ9Y4F5 1589 aaPredicted RBP13.97□□□□□ -0.17
MRE11-210ENST00000541157 KIF7Q2M1P5 1343 aa13.97□□□□□ -0.17
MRE11-210ENST00000541157 SLIT1O75093 1534 aa13.97□□□□□ -0.17
MRE11-210ENST00000541157 ASXL1Q8IXJ9 1541 aa13.97□□□□□ -0.17
MRE11-210ENST00000541157 ZNF579Q8NAF0 562 aaKnown RBP13.97□□□□□ -0.17
MRE11-210ENST00000541157 CCDC61Q9Y6R9 512 aa13.97□□□□□ -0.17
MRE11-210ENST00000541157 PTPRMP28827 1452 aa13.97□□□□□ -0.17
MRE11-210ENST00000541157 ARHGAP23Q9P227 1491 aa13.97□□□□□ -0.17
MRE11-210ENST00000541157 ZNF142P52746 1687 aaPredicted RBP13.97□□□□□ -0.17
MRE11-210ENST00000541157 ALKQ9UM73 1620 aa13.97□□□□□ -0.17
MRE11-210ENST00000541157 HDGFP51858 240 aaKnown RBP13.96□□□□□ -0.17
MRE11-210ENST00000541157 DDX10Q13206 875 aaKnown RBP13.96□□□□□ -0.17
MRE11-210ENST00000541157 NRXN3Q9Y4C0 1643 aa13.95□□□□□ -0.18
MRE11-210ENST00000541157 PHF12Q96QT6 1004 aa13.95□□□□□ -0.18
MRE11-210ENST00000541157 TESK2Q96S53 571 aa13.95□□□□□ -0.18
MRE11-210ENST00000541157 SETD1AO15047 1707 aaKnown RBP13.94□□□□□ -0.18
MRE11-210ENST00000541157 SP7Q8TDD2 431 aaPredicted RBP13.94□□□□□ -0.18
MRE11-210ENST00000541157 TMEM132EQ6IEE7 984 aa13.92□□□□□ -0.18
MRE11-210ENST00000541157 THEMISQ8N1K5 641 aaPredicted RBP13.92□□□□□ -0.18
MRE11-210ENST00000541157 PLEKHG1Q9ULL1 1385 aa13.92□□□□□ -0.18
MRE11-210ENST00000541157 SBNO2Q9Y2G9 1366 aa13.92□□□□□ -0.18
MRE11-210ENST00000541157 ARHGEF28Q8N1W1 1705 aaKnown RBP13.91□□□□□ -0.18
MRE11-210ENST00000541157 DISP3Q9P2K9 1392 aa13.91□□□□□ -0.18
MRE11-210ENST00000541157 YTHDC2Q9H6S0 1430 aaKnown RBP13.9□□□□□ -0.19
MRE11-210ENST00000541157 LTKP29376 864 aa13.89□□□□□ -0.19
MRE11-210ENST00000541157 TMF1P82094 1093 aa13.89□□□□□ -0.19
MRE11-210ENST00000541157 EID1Q9Y6B2 187 aa13.89□□□□□ -0.19
MRE11-210ENST00000541157 ADAMTS13Q76LX8 1427 aa13.89□□□□□ -0.19
MRE11-210ENST00000541157 CENPJQ9HC77 1338 aaPredicted RBP13.89□□□□□ -0.19
MRE11-210ENST00000541157 QRICH2Q9H0J4 1663 aa13.88□□□□□ -0.19
MRE11-210ENST00000541157 LRPPRCP42704 1394 aaKnown RBP13.88□□□□□ -0.19
MRE11-210ENST00000541157 SLC24A1O60721 1099 aa13.88□□□□□ -0.19
MRE11-210ENST00000541157 TXNDC2Q86VQ3 553 aa13.88□□□□□ -0.19
MRE11-210ENST00000541157 TRAK1Q9UPV9 953 aa13.88□□□□□ -0.19
MRE11-210ENST00000541157 SETD1BQ9UPS6 1966 aaKnown RBP13.88□□□□□ -0.19
MRE11-210ENST00000541157 DLC1Q96QB1 1528 aa13.88□□□□□ -0.19
MRE11-210ENST00000541157 MED14O60244 1454 aa13.87□□□□□ -0.19
MRE11-210ENST00000541157 PYGBP11216 843 aa13.87□□□□□ -0.19
MRE11-210ENST00000541157 DIP2AQ14689 1571 aa13.86□□□□□ -0.19
MRE11-210ENST00000541157 METP08581 1390 aa13.85□□□□□ -0.19
MRE11-210ENST00000541157 CDCA8Q53HL2 280 aa13.85□□□□□ -0.19
MRE11-210ENST00000541157 KIF12Q96FN5 646 aa13.85□□□□□ -0.19
MRE11-210ENST00000541157 ABCC11Q96J66 1382 aa13.84□□□□□ -0.19
MRE11-210ENST00000541157 KNDC1Q76NI1 1749 aa13.84□□□□□ -0.19
MRE11-210ENST00000541157 TECPR2O15040 1411 aa13.84□□□□□ -0.19
MRE11-210ENST00000541157 POLR3GLQ9BT43 218 aa13.84□□□□□ -0.19
MRE11-210ENST00000541157 STK26Q9P289 416 aa13.84□□□□□ -0.19
MRE11-210ENST00000541157 GABBR2O75899 941 aa13.83□□□□□ -0.2
MRE11-210ENST00000541157 BCANQ96GW7 911 aa13.83□□□□□ -0.2
MRE11-210ENST00000541157 CPS1P31327 1500 aa13.83□□□□□ -0.2
MRE11-210ENST00000541157 TULP4Q9NRJ4 1543 aa13.81□□□□□ -0.2
MRE11-210ENST00000541157 KDM4FA0A1W2PPD8 638 aa13.81□□□□□ -0.2
MRE11-210ENST00000541157 MAP3K13O43283 966 aa13.81□□□□□ -0.2
MRE11-210ENST00000541157 TBX22Q9Y458 520 aa13.81□□□□□ -0.2
MRE11-210ENST00000541157 FAM135BQ49AJ0 1406 aa13.81□□□□□ -0.2
MRE11-210ENST00000541157 MYOM1P52179 1685 aa13.8□□□□□ -0.2
MRE11-210ENST00000541157 CLCN6P51797 869 aa13.8□□□□□ -0.2
MRE11-210ENST00000541157 ANKLE2Q86XL3 938 aa13.8□□□□□ -0.2
MRE11-210ENST00000541157 SIRT1Q96EB6 747 aa13.8□□□□□ -0.2
MRE11-210ENST00000541157 PRAM1Q96QH2 718 aa13.8□□□□□ -0.2
MRE11-210ENST00000541157 ANP32CO43423 234 aa13.79□□□□□ -0.2
MRE11-210ENST00000541157 GALR2O43603 387 aaPredicted RBP13.78□□□□□ -0.2
MRE11-210ENST00000541157 MS4A3Q96HJ5 214 aa13.78□□□□□ -0.2
MRE11-210ENST00000541157 PUS7Q96PZ0 661 aaKnown RBP13.78□□□□□ -0.2
MRE11-210ENST00000541157 SLC26A8Q96RN1 970 aa13.78□□□□□ -0.2
MRE11-210ENST00000541157 POGKQ9P215 609 aa13.78□□□□□ -0.2
MRE11-210ENST00000541157 EVC2Q86UK5 1308 aa13.77□□□□□ -0.21
MRE11-210ENST00000541157 XRN1Q8IZH2 1706 aaKnown RBP13.77□□□□□ -0.21
MRE11-210ENST00000541157 PTPRUQ92729 1446 aa13.77□□□□□ -0.21
MRE11-210ENST00000541157 PIK3R4Q99570 1358 aa13.77□□□□□ -0.21
MRE11-210ENST00000541157 PCDHB13Q9Y5F0 798 aa13.77□□□□□ -0.21
MRE11-210ENST00000541157 NPHP4O75161 1426 aaPredicted RBP13.76□□□□□ -0.21
MRE11-210ENST00000541157 PLEKHH1Q9ULM0 1364 aa13.76□□□□□ -0.21
MRE11-210ENST00000541157 CHRM1P11229 460 aaPredicted RBP13.76□□□□□ -0.21
MRE11-210ENST00000541157 PTCH1Q13635 1447 aa13.75□□□□□ -0.21
MRE11-210ENST00000541157 ROBO2Q9HCK4 1378 aa13.75□□□□□ -0.21
MRE11-210ENST00000541157 SAFB2Q14151 953 aaKnown RBP eCLIP13.75□□□□□ -0.21
MRE11-210ENST00000541157 MINK1Q8N4C8 1332 aaPredicted RBP13.74□□□□□ -0.21
MRE11-210ENST00000541157 ECM2O94769 699 aaPredicted RBP13.74□□□□□ -0.21
MRE11-210ENST00000541157 WAPLQ7Z5K2 1190 aa13.74□□□□□ -0.21
MRE11-210ENST00000541157 SGIP1Q9BQI5 828 aa13.73□□□□□ -0.21
MRE11-210ENST00000541157 PANK3Q9H999 370 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms