RNA–Protein interactions for RNA: ENST00000540781.5

RAP1B-222, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-222	ENST00000540781	CDC42BPG	Q6DT37	1551 aa		28.95	■■■□□ 2.22
RAP1B-222	ENST00000540781	ORAI2	Q96SN7	254 aa		28.94	■■■□□ 2.22
RAP1B-222	ENST00000540781	NHSL1	Q5SYE7	1610 aa		28.94	■■■□□ 2.22
RAP1B-222	ENST00000540781	DDX17	Q92841	729 aa	Known RBP	28.92	■■■□□ 2.22
RAP1B-222	ENST00000540781	ADGRB1	O14514	1584 aa		28.9	■■■□□ 2.22
RAP1B-222	ENST00000540781	PRAM1	Q96QH2	718 aa		28.89	■■■□□ 2.22
RAP1B-222	ENST00000540781	TRIM26	Q12899	539 aa	Predicted RBP	28.88	■■■□□ 2.21
RAP1B-222	ENST00000540781	LRRC59	Q96AG4	307 aa	Known RBP	28.88	■■■□□ 2.21
RAP1B-222	ENST00000540781	POGK	Q9P215	609 aa		28.88	■■■□□ 2.21
RAP1B-222	ENST00000540781	SPATA31A6	Q5VVP1	1343 aa		28.88	■■■□□ 2.21
RAP1B-222	ENST00000540781	SHPRH	Q149N8	1683 aa		28.87	■■■□□ 2.21
RAP1B-222	ENST00000540781	ESCO1	Q5FWF5	840 aa		28.87	■■■□□ 2.21
RAP1B-222	ENST00000540781	TRAK1	Q9UPV9	953 aa		28.87	■■■□□ 2.21
RAP1B-222	ENST00000540781	DLC1	Q96QB1	1528 aa		28.87	■■■□□ 2.21
RAP1B-222	ENST00000540781	NUTM2F	A1L443	756 aa		28.86	■■■□□ 2.21
RAP1B-222	ENST00000540781	SAFB2	Q14151	953 aa	Known RBP eCLIP	28.86	■■■□□ 2.21
RAP1B-222	ENST00000540781	RGS17	Q9UGC6	210 aa	Predicted RBP	28.84	■■■□□ 2.21
RAP1B-222	ENST00000540781	FMN2	Q9NZ56	1722 aa		28.82	■■■□□ 2.2
RAP1B-222	ENST00000540781	SOCS7	O14512	581 aa		28.81	■■■□□ 2.2
RAP1B-222	ENST00000540781	SIN3A	Q96ST3	1273 aa		28.81	■■■□□ 2.2
RAP1B-222	ENST00000540781	LRP6	O75581	1613 aa		28.8	■■■□□ 2.2
RAP1B-222	ENST00000540781	SOS2	Q07890	1332 aa	Predicted RBP	28.8	■■■□□ 2.2
RAP1B-222	ENST00000540781	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.79	■■■□□ 2.2
RAP1B-222	ENST00000540781	NUTM2E	B1AL46	878 aa	Predicted RBP	28.79	■■■□□ 2.2
RAP1B-222	ENST00000540781	MEX3C	Q5U5Q3	659 aa	Known RBP	28.79	■■■□□ 2.2
RAP1B-222	ENST00000540781	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.79	■■■□□ 2.2
RAP1B-222	ENST00000540781	PNPLA6	Q8IY17	1366 aa		28.77	■■■□□ 2.2
RAP1B-222	ENST00000540781	NPHP3	Q7Z494	1330 aa		28.77	■■■□□ 2.2
RAP1B-222	ENST00000540781	NEUROD1	Q13562	356 aa		28.77	■■■□□ 2.2
RAP1B-222	ENST00000540781	FOXO3	O43524	673 aa		28.75	■■■□□ 2.19
RAP1B-222	ENST00000540781	L3MBTL2	Q969R5	705 aa		28.75	■■■□□ 2.19
RAP1B-222	ENST00000540781	KIAA1210	Q9ULL0	1709 aa		28.74	■■■□□ 2.19
RAP1B-222	ENST00000540781	MINK1	Q8N4C8	1332 aa	Predicted RBP	28.73	■■■□□ 2.19
RAP1B-222	ENST00000540781	POTEA	Q6S8J7	498 aa		28.72	■■■□□ 2.19
RAP1B-222	ENST00000540781	HIRIP3	Q9BW71	556 aa	Predicted RBP	28.72	■■■□□ 2.19
RAP1B-222	ENST00000540781	XPC	Q01831	940 aa	Predicted RBP	28.71	■■■□□ 2.19
RAP1B-222	ENST00000540781	ADGRB2	O60241	1585 aa		28.71	■■■□□ 2.19
RAP1B-222	ENST00000540781	NBPF1	Q3BBV0	1214 aa		28.7	■■■□□ 2.18
RAP1B-222	ENST00000540781	PHF8	Q9UPP1	1060 aa		28.69	■■■□□ 2.18
RAP1B-222	ENST00000540781	PXDN	Q92626	1479 aa		28.69	■■■□□ 2.18
RAP1B-222	ENST00000540781	KIF1A	Q12756	1690 aa		28.69	■■■□□ 2.18
RAP1B-222	ENST00000540781	RGPD8	O14715	1765 aa	Predicted RBP	28.69	■■■□□ 2.18
RAP1B-222	ENST00000540781	ARHGEF28	Q8N1W1	1705 aa	Known RBP	28.69	■■■□□ 2.18
RAP1B-222	ENST00000540781	ANKAR	Q7Z5J8	1434 aa		28.66	■■■□□ 2.18
RAP1B-222	ENST00000540781	WASL	O00401	505 aa	Predicted RBP	28.65	■■■□□ 2.18
RAP1B-222	ENST00000540781	EIF3A	Q14152	1382 aa	Known RBP	28.63	■■■□□ 2.17
RAP1B-222	ENST00000540781	ZNF772	Q68DY9	489 aa	Predicted RBP	28.63	■■■□□ 2.17
RAP1B-222	ENST00000540781	KRT28	Q7Z3Y7	464 aa		28.63	■■■□□ 2.17
RAP1B-222	ENST00000540781	USP32	Q8NFA0	1604 aa		28.62	■■■□□ 2.17
RAP1B-222	ENST00000540781	ADAMTS2	O95450	1211 aa		28.6	■■■□□ 2.17
RAP1B-222	ENST00000540781	PMFBP1	Q8TBY8	1022 aa		28.6	■■■□□ 2.17
RAP1B-222	ENST00000540781	TULP4	Q9NRJ4	1543 aa		28.59	■■■□□ 2.17
RAP1B-222	ENST00000540781	COL22A1	Q8NFW1	1626 aa	Predicted RBP	28.59	■■■□□ 2.17
RAP1B-222	ENST00000540781	PSME1	Q06323	249 aa		28.59	■■■□□ 2.17
RAP1B-222	ENST00000540781	C8orf37	Q96NL8	207 aa		28.59	■■■□□ 2.17
RAP1B-222	ENST00000540781	AFF2	P51816	1311 aa		28.59	■■■□□ 2.17
RAP1B-222	ENST00000540781	PRR36	Q9H6K5	1346 aa		28.59	■■■□□ 2.17
RAP1B-222	ENST00000540781	SPATA31A3	Q5VYP0	1347 aa		28.57	■■■□□ 2.16
RAP1B-222	ENST00000540781	NGLY1	Q96IV0	654 aa		28.54	■■■□□ 2.16
RAP1B-222	ENST00000540781	CDK19	Q9BWU1	502 aa		28.54	■■■□□ 2.16
RAP1B-222	ENST00000540781	TRPM1	Q7Z4N2	1603 aa		28.54	■■■□□ 2.16
RAP1B-222	ENST00000540781	CENPJ	Q9HC77	1338 aa	Predicted RBP	28.53	■■■□□ 2.16
RAP1B-222	ENST00000540781	NUDT16	Q96DE0	195 aa	Known RBP	28.52	■■■□□ 2.16
RAP1B-222	ENST00000540781	TNS3	Q68CZ2	1445 aa		28.51	■■■□□ 2.15
RAP1B-222	ENST00000540781	SBNO1	A3KN83	1393 aa		28.5	■■■□□ 2.15
RAP1B-222	ENST00000540781	TONSL	Q96HA7	1378 aa		28.5	■■■□□ 2.15
RAP1B-222	ENST00000540781	ROCK2	O75116	1388 aa	Known RBP	28.5	■■■□□ 2.15
RAP1B-222	ENST00000540781	NBPF8	Q3BBV2	869 aa		28.49	■■■□□ 2.15
RAP1B-222	ENST00000540781	ATP7B	P35670	1465 aa		28.48	■■■□□ 2.15
RAP1B-222	ENST00000540781	LMOD2	Q6P5Q4	547 aa		28.48	■■■□□ 2.15
RAP1B-222	ENST00000540781	NGDN	Q8NEJ9	315 aa	Known RBP	28.48	■■■□□ 2.15
RAP1B-222	ENST00000540781	GPRASP1	Q5JY77	1395 aa		28.48	■■■□□ 2.15
RAP1B-222	ENST00000540781	RXRB	P28702	533 aa		28.46	■■■□□ 2.15
RAP1B-222	ENST00000540781	ITSN1	Q15811	1721 aa		28.46	■■■□□ 2.15
RAP1B-222	ENST00000540781	QTRT2	Q9H974	415 aa	Known RBP	28.44	■■■□□ 2.14
RAP1B-222	ENST00000540781	ARHGEF10	O15013	1369 aa		28.44	■■■□□ 2.14
RAP1B-222	ENST00000540781	QRICH2	Q9H0J4	1663 aa		28.43	■■■□□ 2.14
RAP1B-222	ENST00000540781	PLEKHG5	O94827	1062 aa		28.42	■■■□□ 2.14
RAP1B-222	ENST00000540781	HAP1	P54257	671 aa	Predicted RBP	28.42	■■■□□ 2.14
RAP1B-222	ENST00000540781	SRPK2	P78362	688 aa	Known RBP	28.42	■■■□□ 2.14
RAP1B-222	ENST00000540781	FNBP4	Q8N3X1	1017 aa	Predicted RBP	28.42	■■■□□ 2.14
RAP1B-222	ENST00000540781	USP21	Q9UK80	565 aa		28.42	■■■□□ 2.14
RAP1B-222	ENST00000540781	CCDC61	Q9Y6R9	512 aa		28.42	■■■□□ 2.14
RAP1B-222	ENST00000540781	MARF1	Q9Y4F3	1742 aa	Known RBP	28.41	■■■□□ 2.14
RAP1B-222	ENST00000540781	CABLES1	Q8TDN4	633 aa		28.41	■■■□□ 2.14
RAP1B-222	ENST00000540781	TRPM3	Q9HCF6	1732 aa	Predicted RBP	28.4	■■■□□ 2.14
RAP1B-222	ENST00000540781	RBM6	P78332	1123 aa	Known RBP	28.38	■■■□□ 2.13
RAP1B-222	ENST00000540781	CABP2	Q9NPB3	220 aa		28.38	■■■□□ 2.13
RAP1B-222	ENST00000540781	TOPAZ1	Q8N9V7	1692 aa		28.38	■■■□□ 2.13
RAP1B-222	ENST00000540781	PLEKHG3	A1L390	1219 aa		28.37	■■■□□ 2.13
RAP1B-222	ENST00000540781	PAK3	O75914	559 aa	Predicted RBP	28.37	■■■□□ 2.13
RAP1B-222	ENST00000540781	PCGF6	Q9BYE7	350 aa		28.36	■■■□□ 2.13
RAP1B-222	ENST00000540781	ACE	P12821	1306 aa		28.36	■■■□□ 2.13
RAP1B-222	ENST00000540781	CARD11	Q9BXL7	1154 aa		28.35	■■■□□ 2.13
RAP1B-222	ENST00000540781	TRPC5	Q9UL62	973 aa	Predicted RBP	28.35	■■■□□ 2.13
RAP1B-222	ENST00000540781	POLR3A	O14802	1390 aa	Predicted RBP	28.35	■■■□□ 2.13
RAP1B-222	ENST00000540781	ALS2	Q96Q42	1657 aa		28.34	■■■□□ 2.13
RAP1B-222	ENST00000540781	EVC2	Q86UK5	1308 aa		28.34	■■■□□ 2.13
RAP1B-222	ENST00000540781	CDK12	Q9NYV4	1490 aa	Predicted RBP	28.34	■■■□□ 2.13
RAP1B-222	ENST00000540781	RALGAPB	Q86X10	1494 aa		28.33	■■■□□ 2.13

Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms