RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 C19orf44Q9H6X5 657 aa27.8■■■□□ 2.04
DDX55-207ENST00000540763 CDC42BPGQ6DT37 1551 aa27.8■■■□□ 2.04
DDX55-207ENST00000540763 NBPF8Q3BBV2 869 aa27.79■■■□□ 2.04
DDX55-207ENST00000540763 RBM33Q96EV2 1170 aaKnown RBP27.79■■■□□ 2.04
DDX55-207ENST00000540763 ADGRB2O60241 1585 aa27.77■■■□□ 2.04
DDX55-207ENST00000540763 ROCK2O75116 1388 aaKnown RBP27.77■■■□□ 2.04
DDX55-207ENST00000540763 NBPF1Q3BBV0 1214 aa27.77■■■□□ 2.04
DDX55-207ENST00000540763 C14orf37Q86TY3 774 aa27.77■■■□□ 2.04
DDX55-207ENST00000540763 CADPS2Q86UW7 1296 aa27.74■■■□□ 2.03
DDX55-207ENST00000540763 PLEKHH1Q9ULM0 1364 aa27.73■■■□□ 2.03
DDX55-207ENST00000540763 TRAK1Q9UPV9 953 aa27.73■■■□□ 2.03
DDX55-207ENST00000540763 PHF23Q9BUL5 403 aaPredicted RBP27.72■■■□□ 2.03
DDX55-207ENST00000540763 WAPLQ7Z5K2 1190 aa27.71■■■□□ 2.03
DDX55-207ENST00000540763 PRAM1Q96QH2 718 aa27.71■■■□□ 2.03
DDX55-207ENST00000540763 FMN2Q9NZ56 1722 aa27.7■■■□□ 2.03
DDX55-207ENST00000540763 ATF3P18847 181 aa27.7■■■□□ 2.02
DDX55-207ENST00000540763 QRICH2Q9H0J4 1663 aa27.69■■■□□ 2.02
DDX55-207ENST00000540763 POGKQ9P215 609 aa27.68■■■□□ 2.02
DDX55-207ENST00000540763 MST1RQ04912 1400 aa27.67■■■□□ 2.02
DDX55-207ENST00000540763 EIF3AQ14152 1382 aaKnown RBP27.67■■■□□ 2.02
DDX55-207ENST00000540763 ROBO1Q9Y6N7 1651 aa27.67■■■□□ 2.02
DDX55-207ENST00000540763 CARD11Q9BXL7 1154 aa27.63■■■□□ 2.01
DDX55-207ENST00000540763 SLAIN2Q9P270 581 aa27.63■■■□□ 2.01
DDX55-207ENST00000540763 CENPJQ9HC77 1338 aaPredicted RBP27.61■■■□□ 2.01
DDX55-207ENST00000540763 C1orf167Q5SNV9 1468 aa27.59■■■□□ 2.01
DDX55-207ENST00000540763 SAFB2Q14151 953 aaKnown RBP eCLIP27.59■■■□□ 2.01
DDX55-207ENST00000540763 SBNO2Q9Y2G9 1366 aa27.57■■■□□ 2
DDX55-207ENST00000540763 ANKARQ7Z5J8 1434 aa27.57■■■□□ 2
DDX55-207ENST00000540763 TULP4Q9NRJ4 1543 aa27.57■■■□□ 2
DDX55-207ENST00000540763 RGPD8O14715 1765 aaPredicted RBP27.56■■■□□ 2
DDX55-207ENST00000540763 NHSL1Q5SYE7 1610 aa27.56■■■□□ 2
DDX55-207ENST00000540763 ITSN1Q15811 1721 aa27.55■■■□□ 2
DDX55-207ENST00000540763 USP32Q8NFA0 1604 aa27.55■■■□□ 2
DDX55-207ENST00000540763 KIF1AQ12756 1690 aa27.55■■■□□ 2
DDX55-207ENST00000540763 AHDC1Q5TGY3 1603 aaPredicted RBP27.54■■■□□ 2
DDX55-207ENST00000540763 MINK1Q8N4C8 1332 aaPredicted RBP27.54■■■□□ 2
DDX55-207ENST00000540763 PHLPP1O60346 1717 aa27.5■■□□□ 1.99
DDX55-207ENST00000540763 WASLO00401 505 aaPredicted RBP27.5■■□□□ 1.99
DDX55-207ENST00000540763 TOPAZ1Q8N9V7 1692 aa27.49■■□□□ 1.99
DDX55-207ENST00000540763 BRINP3Q76B58 766 aa27.49■■□□□ 1.99
DDX55-207ENST00000540763 HIRIP3Q9BW71 556 aaPredicted RBP27.49■■□□□ 1.99
DDX55-207ENST00000540763 USP47Q96K76 1375 aa27.48■■□□□ 1.99
DDX55-207ENST00000540763 ATP7BP35670 1465 aa27.47■■□□□ 1.99
DDX55-207ENST00000540763 COL16A1Q07092 1604 aaPredicted RBP27.45■■□□□ 1.99
DDX55-207ENST00000540763 SLC24A1O60721 1099 aa27.43■■□□□ 1.98
DDX55-207ENST00000540763 RGS17Q9UGC6 210 aaPredicted RBP27.43■■□□□ 1.98
DDX55-207ENST00000540763 EVC2Q86UK5 1308 aa27.42■■□□□ 1.98
DDX55-207ENST00000540763 CDK19Q9BWU1 502 aa27.41■■□□□ 1.98
DDX55-207ENST00000540763 ESCO1Q5FWF5 840 aa27.4■■□□□ 1.98
DDX55-207ENST00000540763 ORAI2Q96SN7 254 aa27.4■■□□□ 1.98
DDX55-207ENST00000540763 PRR36Q9H6K5 1346 aa27.4■■□□□ 1.98
DDX55-207ENST00000540763 NUTM2FA1L443 756 aa27.39■■□□□ 1.98
DDX55-207ENST00000540763 ST20-MTHFSA0A0A6YYL1 179 aa27.38■■□□□ 1.97
DDX55-207ENST00000540763 TESK2Q96S53 571 aa27.36■■□□□ 1.97
DDX55-207ENST00000540763 NPHP3Q7Z494 1330 aa27.36■■□□□ 1.97
DDX55-207ENST00000540763 NUDT16Q96DE0 195 aaKnown RBP27.35■■□□□ 1.97
DDX55-207ENST00000540763 SHPRHQ149N8 1683 aa27.34■■□□□ 1.97
DDX55-207ENST00000540763 SRPK2P78362 688 aaKnown RBP27.34■■□□□ 1.97
DDX55-207ENST00000540763 PHF8Q9UPP1 1060 aa27.34■■□□□ 1.97
DDX55-207ENST00000540763 PXDNQ92626 1479 aa27.33■■□□□ 1.97
DDX55-207ENST00000540763 CCDC61Q9Y6R9 512 aa27.33■■□□□ 1.97
DDX55-207ENST00000540763 ATAD2Q6PL18 1390 aa27.33■■□□□ 1.97
DDX55-207ENST00000540763 PUS7Q96PZ0 661 aaKnown RBP27.32■■□□□ 1.96
DDX55-207ENST00000540763 SOS2Q07890 1332 aaPredicted RBP27.32■■□□□ 1.96
DDX55-207ENST00000540763 EIF4G2P78344 907 aaKnown RBP eCLIP27.31■■□□□ 1.96
DDX55-207ENST00000540763 JCADQ9P266 1359 aa27.3■■□□□ 1.96
DDX55-207ENST00000540763 CABP2Q9NPB3 220 aa27.29■■□□□ 1.96
DDX55-207ENST00000540763 TRPM3Q9HCF6 1732 aaPredicted RBP27.29■■□□□ 1.96
DDX55-207ENST00000540763 PPIP5K1Q6PFW1 1433 aa27.28■■□□□ 1.96
DDX55-207ENST00000540763 POLR3AO14802 1390 aaPredicted RBP27.28■■□□□ 1.96
DDX55-207ENST00000540763 PLEKHG3A1L390 1219 aa27.27■■□□□ 1.96
DDX55-207ENST00000540763 POTEAQ6S8J7 498 aa27.27■■□□□ 1.96
DDX55-207ENST00000540763 AKAP12Q02952 1782 aa27.27■■□□□ 1.96
DDX55-207ENST00000540763 FOXO3O43524 673 aa27.26■■□□□ 1.95
DDX55-207ENST00000540763 TMF1P82094 1093 aa27.25■■□□□ 1.95
DDX55-207ENST00000540763 COL22A1Q8NFW1 1626 aaPredicted RBP27.24■■□□□ 1.95
DDX55-207ENST00000540763 DDX17Q92841 729 aaKnown RBP27.24■■□□□ 1.95
DDX55-207ENST00000540763 LRRC59Q96AG4 307 aaKnown RBP27.24■■□□□ 1.95
DDX55-207ENST00000540763 PMFBP1Q8TBY8 1022 aa27.23■■□□□ 1.95
DDX55-207ENST00000540763 SBNO1A3KN83 1393 aa27.22■■□□□ 1.95
DDX55-207ENST00000540763 NINLQ9Y2I6 1382 aa27.22■■□□□ 1.95
DDX55-207ENST00000540763 ALS2Q96Q42 1657 aa27.22■■□□□ 1.95
DDX55-207ENST00000540763 HSPA5P11021 654 aaKnown RBP27.22■■□□□ 1.95
DDX55-207ENST00000540763 CDCA8Q53HL2 280 aa27.22■■□□□ 1.95
DDX55-207ENST00000540763 PSME1Q06323 249 aa27.2■■□□□ 1.94
DDX55-207ENST00000540763 MON2Q7Z3U7 1717 aa27.2■■□□□ 1.94
DDX55-207ENST00000540763 NGDNQ8NEJ9 315 aaKnown RBP27.2■■□□□ 1.94
DDX55-207ENST00000540763 BRD4O60885 1362 aaPredicted RBP27.2■■□□□ 1.94
DDX55-207ENST00000540763 ZEB1P37275 1124 aaPredicted RBP27.19■■□□□ 1.94
DDX55-207ENST00000540763 KRT28Q7Z3Y7 464 aa27.19■■□□□ 1.94
DDX55-207ENST00000540763 ACEP12821 1306 aa27.18■■□□□ 1.94
DDX55-207ENST00000540763 TNS3Q68CZ2 1445 aa27.18■■□□□ 1.94
DDX55-207ENST00000540763 MYOM1P52179 1685 aa27.17■■□□□ 1.94
DDX55-207ENST00000540763 PNPLA6Q8IY17 1366 aa27.17■■□□□ 1.94
DDX55-207ENST00000540763 NRKQ7Z2Y5 1582 aa27.17■■□□□ 1.94
DDX55-207ENST00000540763 CABP1Q9NZU7 370 aa27.16■■□□□ 1.94
DDX55-207ENST00000540763 CPSF1Q10570 1443 aaKnown RBP27.16■■□□□ 1.94
DDX55-207ENST00000540763 SPATA31A6Q5VVP1 1343 aa27.16■■□□□ 1.94
DDX55-207ENST00000540763 SPATA31A3Q5VYP0 1347 aa27.16■■□□□ 1.94
DDX55-207ENST00000540763 XPCQ01831 940 aaPredicted RBP27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms