RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 SBNO2Q9Y2G9 1366 aa19.77■□□□□ 0.75
CYB561A3-216ENST00000540755 TMF1P82094 1093 aa19.76■□□□□ 0.75
CYB561A3-216ENST00000540755 TMEM132EQ6IEE7 984 aa19.76■□□□□ 0.75
CYB561A3-216ENST00000540755 TBX22Q9Y458 520 aa19.76■□□□□ 0.75
CYB561A3-216ENST00000540755 QRICH2Q9H0J4 1663 aa19.76■□□□□ 0.75
CYB561A3-216ENST00000540755 MSH6P52701 1360 aa19.75■□□□□ 0.75
CYB561A3-216ENST00000540755 YTHDC2Q9H6S0 1430 aaKnown RBP19.73■□□□□ 0.75
CYB561A3-216ENST00000540755 PIK3R4Q99570 1358 aa19.73■□□□□ 0.75
CYB561A3-216ENST00000540755 TRAK1Q9UPV9 953 aa19.73■□□□□ 0.75
CYB561A3-216ENST00000540755 PTPRUQ92729 1446 aa19.72■□□□□ 0.75
CYB561A3-216ENST00000540755 CENPJQ9HC77 1338 aaPredicted RBP19.72■□□□□ 0.75
CYB561A3-216ENST00000540755 PHF23Q9BUL5 403 aaPredicted RBP19.72■□□□□ 0.75
CYB561A3-216ENST00000540755 XRN1Q8IZH2 1706 aaKnown RBP19.71■□□□□ 0.75
CYB561A3-216ENST00000540755 DLC1Q96QB1 1528 aa19.71■□□□□ 0.75
CYB561A3-216ENST00000540755 NCOA3Q9Y6Q9 1424 aa19.71■□□□□ 0.75
CYB561A3-216ENST00000540755 KNDC1Q76NI1 1749 aa19.7■□□□□ 0.74
CYB561A3-216ENST00000540755 CDCA8Q53HL2 280 aa19.7■□□□□ 0.74
CYB561A3-216ENST00000540755 POLR3GLQ9BT43 218 aa19.69■□□□□ 0.74
CYB561A3-216ENST00000540755 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.69■□□□□ 0.74
CYB561A3-216ENST00000540755 PHLPP1O60346 1717 aa19.68■□□□□ 0.74
CYB561A3-216ENST00000540755 LRPPRCP42704 1394 aaKnown RBP19.68■□□□□ 0.74
CYB561A3-216ENST00000540755 COL16A1Q07092 1604 aaPredicted RBP19.68■□□□□ 0.74
CYB561A3-216ENST00000540755 ANP32CO43423 234 aa19.67■□□□□ 0.74
CYB561A3-216ENST00000540755 SLAIN2Q9P270 581 aa19.67■□□□□ 0.74
CYB561A3-216ENST00000540755 RGS17Q9UGC6 210 aaPredicted RBP19.67■□□□□ 0.74
CYB561A3-216ENST00000540755 MYOM1P52179 1685 aa19.65■□□□□ 0.74
CYB561A3-216ENST00000540755 ABCC11Q96J66 1382 aa19.65■□□□□ 0.74
CYB561A3-216ENST00000540755 METP08581 1390 aa19.64■□□□□ 0.73
CYB561A3-216ENST00000540755 TECPR2O15040 1411 aa19.63■□□□□ 0.73
CYB561A3-216ENST00000540755 STK26Q9P289 416 aa19.62■□□□□ 0.73
CYB561A3-216ENST00000540755 AMOTL2Q9Y2J4 779 aa19.62■□□□□ 0.73
CYB561A3-216ENST00000540755 AHDC1Q5TGY3 1603 aaPredicted RBP19.62■□□□□ 0.73
CYB561A3-216ENST00000540755 TULP4Q9NRJ4 1543 aa19.6■□□□□ 0.73
CYB561A3-216ENST00000540755 DCCP43146 1447 aa19.6■□□□□ 0.73
CYB561A3-216ENST00000540755 C14orf37Q86TY3 774 aa19.6■□□□□ 0.73
CYB561A3-216ENST00000540755 JCADQ9P266 1359 aa19.59■□□□□ 0.73
CYB561A3-216ENST00000540755 SIRT1Q96EB6 747 aa19.59■□□□□ 0.73
CYB561A3-216ENST00000540755 PUS7Q96PZ0 661 aaKnown RBP19.59■□□□□ 0.73
CYB561A3-216ENST00000540755 C19orf44Q9H6X5 657 aa19.59■□□□□ 0.73
CYB561A3-216ENST00000540755 CADPS2Q86UW7 1296 aa19.58■□□□□ 0.72
CYB561A3-216ENST00000540755 PRAM1Q96QH2 718 aa19.58■□□□□ 0.72
CYB561A3-216ENST00000540755 EVC2Q86UK5 1308 aa19.57■□□□□ 0.72
CYB561A3-216ENST00000540755 CCER2I3L3R5 266 aa19.57■□□□□ 0.72
CYB561A3-216ENST00000540755 POGKQ9P215 609 aa19.57■□□□□ 0.72
CYB561A3-216ENST00000540755 LRP6O75581 1613 aa19.57■□□□□ 0.72
CYB561A3-216ENST00000540755 NALCNQ8IZF0 1738 aa19.56■□□□□ 0.72
CYB561A3-216ENST00000540755 MST1RQ04912 1400 aa19.55■□□□□ 0.72
CYB561A3-216ENST00000540755 ATF3P18847 181 aa19.54■□□□□ 0.72
CYB561A3-216ENST00000540755 PRKRIP1Q9H875 184 aaPredicted RBP19.54■□□□□ 0.72
CYB561A3-216ENST00000540755 ADGRL3Q9HAR2 1447 aa19.54■□□□□ 0.72
CYB561A3-216ENST00000540755 SHPRHQ149N8 1683 aa19.54■□□□□ 0.72
CYB561A3-216ENST00000540755 POTEAQ6S8J7 498 aa19.54■□□□□ 0.72
CYB561A3-216ENST00000540755 PER1O15534 1290 aaPredicted RBP19.53■□□□□ 0.72
CYB561A3-216ENST00000540755 BRINP3Q76B58 766 aa19.53■□□□□ 0.72
CYB561A3-216ENST00000540755 PANK3Q9H999 370 aa19.53■□□□□ 0.72
CYB561A3-216ENST00000540755 NHSL1Q5SYE7 1610 aa19.52■□□□□ 0.72
CYB561A3-216ENST00000540755 SAFB2Q14151 953 aaKnown RBP eCLIP19.52■□□□□ 0.72
CYB561A3-216ENST00000540755 PLEKHH1Q9ULM0 1364 aa19.52■□□□□ 0.71
CYB561A3-216ENST00000540755 PTCH1Q13635 1447 aa19.51■□□□□ 0.71
CYB561A3-216ENST00000540755 KTN1Q86UP2 1357 aaKnown RBP19.51■□□□□ 0.71
CYB561A3-216ENST00000540755 MINK1Q8N4C8 1332 aaPredicted RBP19.5■□□□□ 0.71
CYB561A3-216ENST00000540755 ADGRB2O60241 1585 aa19.5■□□□□ 0.71
CYB561A3-216ENST00000540755 WAPLQ7Z5K2 1190 aa19.49■□□□□ 0.71
CYB561A3-216ENST00000540755 ROBO2Q9HCK4 1378 aa19.49■□□□□ 0.71
CYB561A3-216ENST00000540755 NINLQ9Y2I6 1382 aa19.49■□□□□ 0.71
CYB561A3-216ENST00000540755 ATAD2Q6PL18 1390 aa19.48■□□□□ 0.71
CYB561A3-216ENST00000540755 SPATA31A6Q5VVP1 1343 aa19.47■□□□□ 0.71
CYB561A3-216ENST00000540755 CABP2Q9NPB3 220 aa19.45■□□□□ 0.7
CYB561A3-216ENST00000540755 SRPK2P78362 688 aaKnown RBP19.44■□□□□ 0.7
CYB561A3-216ENST00000540755 RALBP1Q15311 655 aa19.44■□□□□ 0.7
CYB561A3-216ENST00000540755 PARD3Q8TEW0 1356 aa19.44■□□□□ 0.7
CYB561A3-216ENST00000540755 NPC1L1Q9UHC9 1359 aa19.44■□□□□ 0.7
CYB561A3-216ENST00000540755 CDK19Q9BWU1 502 aa19.43■□□□□ 0.7
CYB561A3-216ENST00000540755 KNSTRNQ9Y448 316 aa19.43■□□□□ 0.7
CYB561A3-216ENST00000540755 USP32Q8NFA0 1604 aa19.43■□□□□ 0.7
CYB561A3-216ENST00000540755 C1orf167Q5SNV9 1468 aa19.42■□□□□ 0.7
CYB561A3-216ENST00000540755 TMC1Q8TDI8 760 aa19.41■□□□□ 0.7
CYB561A3-216ENST00000540755 ANKRD36BQ8N2N9 1353 aa19.41■□□□□ 0.7
CYB561A3-216ENST00000540755 WASLO00401 505 aaPredicted RBP19.41■□□□□ 0.7
CYB561A3-216ENST00000540755 SLC12A5Q9H2X9 1139 aa19.41■□□□□ 0.7
CYB561A3-216ENST00000540755 AMER1Q5JTC6 1135 aaPredicted RBP19.4■□□□□ 0.7
CYB561A3-216ENST00000540755 DDX17Q92841 729 aaKnown RBP19.39■□□□□ 0.69
CYB561A3-216ENST00000540755 MYBBP1AQ9BQG0 1328 aaKnown RBP19.38■□□□□ 0.69
CYB561A3-216ENST00000540755 CDC42BPGQ6DT37 1551 aa19.38■□□□□ 0.69
CYB561A3-216ENST00000540755 PNPLA6Q8IY17 1366 aa19.37■□□□□ 0.69
CYB561A3-216ENST00000540755 CARD14Q9BXL6 1004 aa19.37■□□□□ 0.69
CYB561A3-216ENST00000540755 ATP7BP35670 1465 aa19.37■□□□□ 0.69
CYB561A3-216ENST00000540755 NSD3Q9BZ95 1437 aa19.37■□□□□ 0.69
CYB561A3-216ENST00000540755 CD163L1Q9NR16 1453 aa19.36■□□□□ 0.69
CYB561A3-216ENST00000540755 TOPAZ1Q8N9V7 1692 aa19.36■□□□□ 0.69
CYB561A3-216ENST00000540755 CC2D1BQ5T0F9 858 aaKnown RBP19.35■□□□□ 0.69
CYB561A3-216ENST00000540755 MEX3CQ5U5Q3 659 aaKnown RBP19.35■□□□□ 0.69
CYB561A3-216ENST00000540755 CNGB1Q14028 1251 aaPredicted RBP19.35■□□□□ 0.69
CYB561A3-216ENST00000540755 A0A1W2PP64 1363 aa19.33■□□□□ 0.69
CYB561A3-216ENST00000540755 NUTM2BA6NNL0 878 aaPredicted RBP19.33■□□□□ 0.68
CYB561A3-216ENST00000540755 NUTM2EB1AL46 878 aaPredicted RBP19.33■□□□□ 0.68
CYB561A3-216ENST00000540755 CENPBP07199 599 aaPredicted RBP19.33■□□□□ 0.68
CYB561A3-216ENST00000540755 CCDC184Q52MB2 194 aa19.33■□□□□ 0.68
CYB561A3-216ENST00000540755 NUTM2AQ8IVF1 878 aaPredicted RBP19.33■□□□□ 0.68
CYB561A3-216ENST00000540755 YTHDC1Q96MU7 727 aaKnown RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms