RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, humanhuman

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-205ENST00000538828 NHSL1Q5SYE7 1610 aa17.86■□□□□ 0.45
CLTCL1-205ENST00000538828 SPATA31A6Q5VVP1 1343 aa17.84■□□□□ 0.45
CLTCL1-205ENST00000538828 KDM2AQ9Y2K7 1162 aa17.84■□□□□ 0.45
CLTCL1-205ENST00000538828 WAPLQ7Z5K2 1190 aa17.83■□□□□ 0.44
CLTCL1-205ENST00000538828 LRRC59Q96AG4 307 aaKnown RBP17.82■□□□□ 0.44
CLTCL1-205ENST00000538828 SHPRHQ149N8 1683 aa17.82■□□□□ 0.44
CLTCL1-205ENST00000538828 PLEKHH1Q9ULM0 1364 aa17.8■□□□□ 0.44
CLTCL1-205ENST00000538828 ADGRB2O60241 1585 aa17.8■□□□□ 0.44
CLTCL1-205ENST00000538828 SOS2Q07890 1332 aaPredicted RBP17.79■□□□□ 0.44
CLTCL1-205ENST00000538828 FMN2Q9NZ56 1722 aa17.79■□□□□ 0.44
CLTCL1-205ENST00000538828 PRAM1Q96QH2 718 aa17.78■□□□□ 0.44
CLTCL1-205ENST00000538828 NPHP3Q7Z494 1330 aa17.77■□□□□ 0.44
CLTCL1-205ENST00000538828 ORAI2Q96SN7 254 aa17.77■□□□□ 0.44
CLTCL1-205ENST00000538828 POGKQ9P215 609 aa17.77■□□□□ 0.44
CLTCL1-205ENST00000538828 ANKARQ7Z5J8 1434 aa17.77■□□□□ 0.44
CLTCL1-205ENST00000538828 EIF3AQ14152 1382 aaKnown RBP17.77■□□□□ 0.43
CLTCL1-205ENST00000538828 PHF23Q9BUL5 403 aaPredicted RBP17.76■□□□□ 0.43
CLTCL1-205ENST00000538828 L3MBTL2Q969R5 705 aa17.75■□□□□ 0.43
CLTCL1-205ENST00000538828 TRAK1Q9UPV9 953 aa17.75■□□□□ 0.43
CLTCL1-205ENST00000538828 KIF1AQ12756 1690 aa17.74■□□□□ 0.43
CLTCL1-205ENST00000538828 ESCO1Q5FWF5 840 aa17.74■□□□□ 0.43
CLTCL1-205ENST00000538828 SIN3AQ96ST3 1273 aa17.73■□□□□ 0.43
CLTCL1-205ENST00000538828 ARHGEF28Q8N1W1 1705 aaKnown RBP17.72■□□□□ 0.43
CLTCL1-205ENST00000538828 PNPLA6Q8IY17 1366 aa17.71■□□□□ 0.43
CLTCL1-205ENST00000538828 ILDR2Q71H61 639 aa17.71■□□□□ 0.43
CLTCL1-205ENST00000538828 PXDNQ92626 1479 aa17.69■□□□□ 0.42
CLTCL1-205ENST00000538828 WASLO00401 505 aaPredicted RBP17.69■□□□□ 0.42
CLTCL1-205ENST00000538828 TULP4Q9NRJ4 1543 aa17.68■□□□□ 0.42
CLTCL1-205ENST00000538828 FOXO3O43524 673 aa17.68■□□□□ 0.42
CLTCL1-205ENST00000538828 RGS17Q9UGC6 210 aaPredicted RBP17.68■□□□□ 0.42
CLTCL1-205ENST00000538828 COL22A1Q8NFW1 1626 aaPredicted RBP17.68■□□□□ 0.42
CLTCL1-205ENST00000538828 NEUROD1Q13562 356 aa17.67■□□□□ 0.42
CLTCL1-205ENST00000538828 SAFB2Q14151 953 aaKnown RBP eCLIP17.67■□□□□ 0.42
CLTCL1-205ENST00000538828 NBPF1Q3BBV0 1214 aa17.67■□□□□ 0.42
CLTCL1-205ENST00000538828 DDX17Q92841 729 aaKnown RBP17.67■□□□□ 0.42
CLTCL1-205ENST00000538828 PHF8Q9UPP1 1060 aa17.67■□□□□ 0.42
CLTCL1-205ENST00000538828 LRP6O75581 1613 aa17.67■□□□□ 0.42
CLTCL1-205ENST00000538828 CLSPNQ9HAW4 1339 aa17.67■□□□□ 0.42
CLTCL1-205ENST00000538828 TRPM1Q7Z4N2 1603 aa17.66■□□□□ 0.42
CLTCL1-205ENST00000538828 GPRASP1Q5JY77 1395 aa17.66■□□□□ 0.42
CLTCL1-205ENST00000538828 USP32Q8NFA0 1604 aa17.65■□□□□ 0.42
CLTCL1-205ENST00000538828 SOCS7O14512 581 aa17.65■□□□□ 0.42
CLTCL1-205ENST00000538828 RGPD8O14715 1765 aaPredicted RBP17.65■□□□□ 0.42
CLTCL1-205ENST00000538828 MINK1Q8N4C8 1332 aaPredicted RBP17.65■□□□□ 0.42
CLTCL1-205ENST00000538828 SBNO1A3KN83 1393 aa17.65■□□□□ 0.42
CLTCL1-205ENST00000538828 NUTM2FA1L443 756 aa17.64■□□□□ 0.41
CLTCL1-205ENST00000538828 PSME1Q06323 249 aa17.64■□□□□ 0.41
CLTCL1-205ENST00000538828 ZNF772Q68DY9 489 aaPredicted RBP17.64■□□□□ 0.41
CLTCL1-205ENST00000538828 SPATA31A3Q5VYP0 1347 aa17.63■□□□□ 0.41
CLTCL1-205ENST00000538828 CENPJQ9HC77 1338 aaPredicted RBP17.63■□□□□ 0.41
CLTCL1-205ENST00000538828 TONSLQ96HA7 1378 aa17.63■□□□□ 0.41
CLTCL1-205ENST00000538828 MEX3CQ5U5Q3 659 aaKnown RBP17.62■□□□□ 0.41
CLTCL1-205ENST00000538828 ITSN1Q15811 1721 aa17.61■□□□□ 0.41
CLTCL1-205ENST00000538828 KRT28Q7Z3Y7 464 aa17.61■□□□□ 0.41
CLTCL1-205ENST00000538828 HIRIP3Q9BW71 556 aaPredicted RBP17.61■□□□□ 0.41
CLTCL1-205ENST00000538828 ROCK2O75116 1388 aaKnown RBP17.61■□□□□ 0.41
CLTCL1-205ENST00000538828 TIMELESSQ9UNS1 1208 aa17.6■□□□□ 0.41
CLTCL1-205ENST00000538828 PRR36Q9H6K5 1346 aa17.6■□□□□ 0.41
CLTCL1-205ENST00000538828 ATP7BP35670 1465 aa17.6■□□□□ 0.41
CLTCL1-205ENST00000538828 TNS3Q68CZ2 1445 aa17.59■□□□□ 0.41
CLTCL1-205ENST00000538828 ARHGEF10O15013 1369 aa17.59■□□□□ 0.41
CLTCL1-205ENST00000538828 CCDC61Q9Y6R9 512 aa17.59■□□□□ 0.41
CLTCL1-205ENST00000538828 NUDT16Q96DE0 195 aaKnown RBP17.58■□□□□ 0.4
CLTCL1-205ENST00000538828 CDK19Q9BWU1 502 aa17.58■□□□□ 0.4
CLTCL1-205ENST00000538828 RALGAPBQ86X10 1494 aa17.57■□□□□ 0.4
CLTCL1-205ENST00000538828 SBNO2Q9Y2G9 1366 aa17.57■□□□□ 0.4
CLTCL1-205ENST00000538828 NUTM2BA6NNL0 878 aaPredicted RBP17.57■□□□□ 0.4
CLTCL1-205ENST00000538828 NUTM2EB1AL46 878 aaPredicted RBP17.57■□□□□ 0.4
CLTCL1-205ENST00000538828 NBPF8Q3BBV2 869 aa17.57■□□□□ 0.4
CLTCL1-205ENST00000538828 POTEAQ6S8J7 498 aa17.57■□□□□ 0.4
CLTCL1-205ENST00000538828 NUTM2AQ8IVF1 878 aaPredicted RBP17.57■□□□□ 0.4
CLTCL1-205ENST00000538828 POLR3AO14802 1390 aaPredicted RBP17.56■□□□□ 0.4
CLTCL1-205ENST00000538828 PLEKHG3A1L390 1219 aa17.56■□□□□ 0.4
CLTCL1-205ENST00000538828 FNBP4Q8N3X1 1017 aaPredicted RBP17.55■□□□□ 0.4
CLTCL1-205ENST00000538828 TOPAZ1Q8N9V7 1692 aa17.55■□□□□ 0.4
CLTCL1-205ENST00000538828 QRICH2Q9H0J4 1663 aa17.55■□□□□ 0.4
CLTCL1-205ENST00000538828 BRD4O60885 1362 aaPredicted RBP17.54■□□□□ 0.4
CLTCL1-205ENST00000538828 XPCQ01831 940 aaPredicted RBP17.54■□□□□ 0.4
CLTCL1-205ENST00000538828 PMFBP1Q8TBY8 1022 aa17.54■□□□□ 0.4
CLTCL1-205ENST00000538828 TRPM3Q9HCF6 1732 aaPredicted RBP17.54■□□□□ 0.4
CLTCL1-205ENST00000538828 MARF1Q9Y4F3 1742 aaKnown RBP17.54■□□□□ 0.4
CLTCL1-205ENST00000538828 AFF2P51816 1311 aa17.53■□□□□ 0.4
CLTCL1-205ENST00000538828 CDK12Q9NYV4 1490 aaPredicted RBP17.53■□□□□ 0.4
CLTCL1-205ENST00000538828 EVC2Q86UK5 1308 aa17.52■□□□□ 0.4
CLTCL1-205ENST00000538828 SLC24A1O60721 1099 aa17.52■□□□□ 0.4
CLTCL1-205ENST00000538828 NGDNQ8NEJ9 315 aaKnown RBP17.52■□□□□ 0.4
CLTCL1-205ENST00000538828 ALS2Q96Q42 1657 aa17.52■□□□□ 0.39
CLTCL1-205ENST00000538828 NGLY1Q96IV0 654 aa17.51■□□□□ 0.39
CLTCL1-205ENST00000538828 C8orf37Q96NL8 207 aa17.51■□□□□ 0.39
CLTCL1-205ENST00000538828 CARD11Q9BXL7 1154 aa17.51■□□□□ 0.39
CLTCL1-205ENST00000538828 ADAMTS2O95450 1211 aa17.49■□□□□ 0.39
CLTCL1-205ENST00000538828 PUS7Q96PZ0 661 aaKnown RBP17.49■□□□□ 0.39
CLTCL1-205ENST00000538828 PCGF6Q9BYE7 350 aa17.49■□□□□ 0.39
CLTCL1-205ENST00000538828 RXRBP28702 533 aa17.48■□□□□ 0.39
CLTCL1-205ENST00000538828 SRPK2P78362 688 aaKnown RBP17.48■□□□□ 0.39
CLTCL1-205ENST00000538828 ACEP12821 1306 aa17.47■□□□□ 0.39
CLTCL1-205ENST00000538828 RBM6P78332 1123 aaKnown RBP17.47■□□□□ 0.39
CLTCL1-205ENST00000538828 ATAD2Q6PL18 1390 aa17.47■□□□□ 0.39
CLTCL1-205ENST00000538828 PPIP5K1Q6PFW1 1433 aa17.47■□□□□ 0.39
CLTCL1-205ENST00000538828 QTRT2Q9H974 415 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms